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Registro Completo |
Biblioteca(s): |
Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
Data corrente: |
24/10/2014 |
Data da última atualização: |
16/11/2022 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
SOMAVILLA, A. L.; SONSTEGARD, T. S.; HIGA, R. H.; ROSA, A. do N.; SIQUEIRA, F.; SILVA, L. O. C. da; TORRES JUNIOR, R. A. de A.; COUTINHO, L. L.; MUDADU, M. de A.; ALENCAR, M. M. de; REGITANO, L. C. de A. |
Afiliação: |
A. L. SOMAVILLA, Programa de Pós-Graduação em Genética e Melhoramento Animal, UNESP/FCAV, Jaboticabal, Brasil; T. S. SONSTEGARD, Bovine Functional Genomics Laboratory, ANRI, USDA-ARS, Beltsville, MD, USA; ROBERTO HIROSHI HIGA, CNPTIA; ANTONIO DO NASCIMENTO ROSA, CNPGC; FABIANE SIQUEIRA, CNPGC; LUIZ OTAVIO CAMPOS DA SILVA, CNPGC; ROBERTO AUGUSTO DE A TORRES JUNIOR, CNPGC; L. L. COUTINHO, Escola Superior de Agricultura Luiz de Queiroz (Esalq), USP, Piracicaba, Brasil; MAURICIO DE ALVARENGA MUDADU, CPPSE; MAURICIO MELLO DE ALENCAR, CPPSE; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE. |
Título: |
A genome-wide scan for selection signatures in Nellore cattle. |
Ano de publicação: |
2014 |
Fonte/Imprenta: |
Animal Genetics, v. 45, n. 6, p. 771-781, dec. 2014 |
DOI: |
10.1111/age.12210 |
Idioma: |
Inglês |
Conteúdo: |
Brazilian Nellore cattle (Bos indicus) have been selected for growth traits for over more than four decades. In recent years, reproductive and meat quality traits have become more important because of increasing consumption, exports and consumer demand. The identification of genome regions altered by artificial selection can potentially permit a better understanding of the biology of specific phenotypes that are useful for the development of tools designed to increase selection efficiency. Therefore, the aims of this study were to detect evidence of recent selection signatures in Nellore cattle using extended haplotype homozygosity methodology and BovineHD marker genotypes (>777 000 single nucleotide polymorphisms) as well as to identify corresponding genes underlying these signals. Thirty-one significant regions (P < 0.0001) of possible recent selection signatures were detected, and 19 of these overlapped quantitative trait loci related to reproductive traits, growth, feed efficiency, meat quality, fatty acid profiles and immunity. In addition, 545 genes were identified in regions harboring selection signatures. Within this group, 58 genes were associated with growth, muscle and adipose tissue metabolism, reproductive traits or the immune system. Using relative extended haplotype homozygosity to analyze high-density single nucleotide polymorphism marker data allowed for the identification of regions potentially under artificial selection pressure in the Nellore genome, which might be used to better understand autozygosity and the effects of selection on the Nellore genome. MenosBrazilian Nellore cattle (Bos indicus) have been selected for growth traits for over more than four decades. In recent years, reproductive and meat quality traits have become more important because of increasing consumption, exports and consumer demand. The identification of genome regions altered by artificial selection can potentially permit a better understanding of the biology of specific phenotypes that are useful for the development of tools designed to increase selection efficiency. Therefore, the aims of this study were to detect evidence of recent selection signatures in Nellore cattle using extended haplotype homozygosity methodology and BovineHD marker genotypes (>777 000 single nucleotide polymorphisms) as well as to identify corresponding genes underlying these signals. Thirty-one significant regions (P < 0.0001) of possible recent selection signatures were detected, and 19 of these overlapped quantitative trait loci related to reproductive traits, growth, feed efficiency, meat quality, fatty acid profiles and immunity. In addition, 545 genes were identified in regions harboring selection signatures. Within this group, 58 genes were associated with growth, muscle and adipose tissue metabolism, reproductive traits or the immune system. Using relative extended haplotype homozygosity to analyze high-density single nucleotide polymorphism marker data allowed for the identification of regions potentially under artificial selection pressure in the Nellore genome, whic... Mostrar Tudo |
Palavras-Chave: |
Desequilíbrio de ligação; Homozigose do haplótipo estendido; Polimorfismo de nucleotídeo único; Relative extended haplotype homozygosity; Single nucleotid; Single nucleotide polymorphisms. |
Thesagro: |
Bos Indicus; Gado de corte. |
Thesaurus Nal: |
Beef cattle; Genotyping; Linkage disequilibrium; Single nucleotide polymorphism. |
Categoria do assunto: |
G Melhoramento Genético S Ciências Biológicas |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/110576/1/PROCI-2014.00083-2.pdf
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Marc: |
LEADER 02827naa a2200397 a 4500 001 1998406 005 2022-11-16 008 2014 bl uuuu u00u1 u #d 024 7 $a10.1111/age.12210$2DOI 100 1 $aSOMAVILLA, A. L. 245 $aA genome-wide scan for selection signatures in Nellore cattle.$h[electronic resource] 260 $c2014 520 $aBrazilian Nellore cattle (Bos indicus) have been selected for growth traits for over more than four decades. In recent years, reproductive and meat quality traits have become more important because of increasing consumption, exports and consumer demand. The identification of genome regions altered by artificial selection can potentially permit a better understanding of the biology of specific phenotypes that are useful for the development of tools designed to increase selection efficiency. Therefore, the aims of this study were to detect evidence of recent selection signatures in Nellore cattle using extended haplotype homozygosity methodology and BovineHD marker genotypes (>777 000 single nucleotide polymorphisms) as well as to identify corresponding genes underlying these signals. Thirty-one significant regions (P < 0.0001) of possible recent selection signatures were detected, and 19 of these overlapped quantitative trait loci related to reproductive traits, growth, feed efficiency, meat quality, fatty acid profiles and immunity. In addition, 545 genes were identified in regions harboring selection signatures. Within this group, 58 genes were associated with growth, muscle and adipose tissue metabolism, reproductive traits or the immune system. Using relative extended haplotype homozygosity to analyze high-density single nucleotide polymorphism marker data allowed for the identification of regions potentially under artificial selection pressure in the Nellore genome, which might be used to better understand autozygosity and the effects of selection on the Nellore genome. 650 $aBeef cattle 650 $aGenotyping 650 $aLinkage disequilibrium 650 $aSingle nucleotide polymorphism 650 $aBos Indicus 650 $aGado de corte 653 $aDesequilíbrio de ligação 653 $aHomozigose do haplótipo estendido 653 $aPolimorfismo de nucleotídeo único 653 $aRelative extended haplotype homozygosity 653 $aSingle nucleotid 653 $aSingle nucleotide polymorphisms 700 1 $aSONSTEGARD, T. S. 700 1 $aHIGA, R. H. 700 1 $aROSA, A. do N. 700 1 $aSIQUEIRA, F. 700 1 $aSILVA, L. O. C. da 700 1 $aTORRES JUNIOR, R. A. de A. 700 1 $aCOUTINHO, L. L. 700 1 $aMUDADU, M. de A. 700 1 $aALENCAR, M. M. de 700 1 $aREGITANO, L. C. de A. 773 $tAnimal Genetics$gv. 45, n. 6, p. 771-781, dec. 2014
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Registro original: |
Embrapa Pecuária Sudeste (CPPSE) |
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Registro Completo
Biblioteca(s): |
Embrapa Solos. |
Data corrente: |
23/03/2009 |
Data da última atualização: |
24/03/2023 |
Tipo da produção científica: |
Documentos |
Autoria: |
MENDONÇA-SANTOS, M. de L.; ANTUNES, F. dos S.; CALDERANO, S. B.; SANTOS, H. G. dos; POLIVANOV, H.; CAMPOS, T. M. P. de; ZARONI, M. J.; DONAGEMMA, G. K.; AMARAL, C. P. do. |
Afiliação: |
MARIA DE LOURDES M SANTOS BREFIN, CNPS; FRANKLIN DOS SANTOS ANTUNES, PUC-RJ; SEBASTIAO BARREIROS CALDERANO, CNPS; HUMBERTO GONCALVES DOS SANTOS, CNPS; HELENA POLIVANOV, UFRJ; TACIO MAURO PEREIRA DE CAMPOS, PUC-RJ; MARIA JOSE ZARONI, CNPS; GUILHERME KANGUSSU DONAGEMMA, CNPS; CLÁUDIO PALMEIRO DO AMARAL, UERJ. |
Título: |
Correlação pedológico-geotécnica do Município do Rio de Janeiro. |
Ano de publicação: |
2009 |
Fonte/Imprenta: |
Rio de Janeiro: Embrapa Solos, 2009. |
Páginas: |
46 p. |
Descrição Física: |
il. color. |
Série: |
(Embrapa Solos. Documentos, 117). |
ISSN: |
1517-2627 |
Idioma: |
Português |
Conteúdo: |
A correlação direta entre o conhecimento gerado nos levantamentos pedológicos e o seu aproveitamento para os diagnósticos geotécnicos preliminares dos problemas que afetam o uso do solo e o meio ambiente é o objetivo deste trabalho. |
Palavras-Chave: |
Classes de solos; Correlação pedológico-geotécnica; Unidades pedogeotécnicas. |
Categoria do assunto: |
P Recursos Naturais, Ciências Ambientais e da Terra |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/CNPS-2010/13993/1/doc117-2009-pedologia-rio-de-janeiro.pdf
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Marc: |
LEADER 01060nam a2200277 a 4500 001 1335553 005 2023-03-24 008 2009 bl uuuu u0uu1 u #d 022 $a1517-2627 100 1 $aMENDONÇA-SANTOS, M. de L. 245 $aCorrelação pedológico-geotécnica do Município do Rio de Janeiro. 260 $aRio de Janeiro: Embrapa Solos$c2009 300 $a46 p.$cil. color. 490 $a(Embrapa Solos. Documentos, 117). 520 $aA correlação direta entre o conhecimento gerado nos levantamentos pedológicos e o seu aproveitamento para os diagnósticos geotécnicos preliminares dos problemas que afetam o uso do solo e o meio ambiente é o objetivo deste trabalho. 653 $aClasses de solos 653 $aCorrelação pedológico-geotécnica 653 $aUnidades pedogeotécnicas 700 1 $aANTUNES, F. dos S. 700 1 $aCALDERANO, S. B. 700 1 $aSANTOS, H. G. dos 700 1 $aPOLIVANOV, H. 700 1 $aCAMPOS, T. M. P. de 700 1 $aZARONI, M. J. 700 1 $aDONAGEMMA, G. K. 700 1 $aAMARAL, C. P. do
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