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Registro Completo |
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Biblioteca(s): |
Embrapa Gado de Leite. |
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Data corrente: |
25/07/2022 |
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Data da última atualização: |
25/07/2022 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
SANTOS, C. G. dos; SOUSA, M. F.; VIEIRA, J. I. G.; MORAIS, L. R. de; FERNANDES, A. A. S.; LITTIERE, T. de O.; OTTO, P. I.; MACHADO, M. A.; SILVA, M. V. G. B.; BONAFÉ, C. M.; MAGALHÃES, A. F. B.; VERARDO, L. L. |
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Afiliação: |
CASSIANE GOMES DOS SANTOS, Universidade Federal dos Vales do Jequitinhonha e Mucuri; MARIELE FREITAS SOUSA, Universidade Federal dos Vales do Jequitinhonha e Mucuri; JOÃO INÁCIO GOMES VIEIRA, Universidade Federal dos Vales do Jequitinhonha e Mucuri; LUANA RAFAELA DE MORAIS, Universidade Federal dos Vales do Jequitinhonha e Mucuri; ALINE AUXILIADORA SILVA FERNANDES, Universidade Federal dos Vales do Jequitinhonha e Mucuri; THAYSSA DE OLIVEIRA LITTIERE, Universidade Estadual Paulista "Júlio de Mesquita Filho"; PAMELA ITAJARA OTTO, Universidade Federal de Santa Maria; MARCO ANTONIO MACHADO, CNPGL; MARCOS VINICIUS GUALBERTO B SILVA, CNPGL; CRISTINA MOREIRA BONAFÉ, Universidade Federal dos Vales do Jequitinhonha e Mucuri; ANA FABRÍCIA BRAGA MAGALHÃES, Universidade Federal dos Vales do Jequitinhonha e Mucuri; LUCAS LIMA VERARDO, Universidade Federal dos Vales do Jequitinhonha e Mucuri. |
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Título: |
Candidate genes for tick resistance in cattle: a systematic review combining post-GWAS analyses with sequencing data. |
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Ano de publicação: |
2022 |
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Fonte/Imprenta: |
Journal of Applied Animal Research, v. 50, n. 1, p. 460-470, 2022. |
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DOI: |
https://doi.org/10.1080/09712119.2022.2096035 |
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Idioma: |
Inglês |
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Conteúdo: |
Rhipicephalus microplus causes huge losses in cattle. Host genetic background greatly affects the immune efficiency in resistance or susceptibility to tick infestation, which is one of the many factors that play a role on that trait. We performed a systematic review of genome-wide association studies (GWAS) for tick resistance in cattle resulting in 1353 candidate genes for post-GWAS analyses. From those, genes showing possible structural variants from the bovine genome were classified by the Variant Effect Predictor from Ensembl. Ninety-two candidate genes showed potential structural variants in 5' UTR and coding region and were used for functional annotation. Enriched biological processes (e.g. regulation of eosinophil chemotaxis, RIG-I signalling pathway and monocyte differentiation) and candidate genes (e.g. DAPK2, PUM1, ACIN1, INPP5D) linked with immune system function were identified and thus associated with tick resistance. Besides, gene-transcription factors (TFs) networks were obtained from TFs associated with immune system (FOXO3, PPARG, STAT3, NFKB1, GATA3 and ARNT) and the candidate genes associated with tick resistance in cattle highlighted (e.g. OR4L1, PNP, LRRIQ1, GIMAP8, MYO6, MEP1A and LRFN2). Thus, promising candidate genes with a possible functional role for tick resistance in cattle are presented for further in vitro and/or in vivo analyses. |
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Palavras-Chave: |
Ectoparasita; Sistema imunológico. |
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Thesagro: |
Bovino; Carne; Carrapato; Genoma; Hospedeiro Animal. |
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Categoria do assunto: |
L Ciência Animal e Produtos de Origem Animal |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1144893/1/Candidate-genes-for-tick-resistance-in-cattle.pdf
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Marc: |
LEADER 02437naa a2200349 a 4500
001 2144893
005 2022-07-25
008 2022 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1080/09712119.2022.2096035$2DOI
100 1 $aSANTOS, C. G. dos
245 $aCandidate genes for tick resistance in cattle$ba systematic review combining post-GWAS analyses with sequencing data.$h[electronic resource]
260 $c2022
520 $aRhipicephalus microplus causes huge losses in cattle. Host genetic background greatly affects the immune efficiency in resistance or susceptibility to tick infestation, which is one of the many factors that play a role on that trait. We performed a systematic review of genome-wide association studies (GWAS) for tick resistance in cattle resulting in 1353 candidate genes for post-GWAS analyses. From those, genes showing possible structural variants from the bovine genome were classified by the Variant Effect Predictor from Ensembl. Ninety-two candidate genes showed potential structural variants in 5' UTR and coding region and were used for functional annotation. Enriched biological processes (e.g. regulation of eosinophil chemotaxis, RIG-I signalling pathway and monocyte differentiation) and candidate genes (e.g. DAPK2, PUM1, ACIN1, INPP5D) linked with immune system function were identified and thus associated with tick resistance. Besides, gene-transcription factors (TFs) networks were obtained from TFs associated with immune system (FOXO3, PPARG, STAT3, NFKB1, GATA3 and ARNT) and the candidate genes associated with tick resistance in cattle highlighted (e.g. OR4L1, PNP, LRRIQ1, GIMAP8, MYO6, MEP1A and LRFN2). Thus, promising candidate genes with a possible functional role for tick resistance in cattle are presented for further in vitro and/or in vivo analyses.
650 $aBovino
650 $aCarne
650 $aCarrapato
650 $aGenoma
650 $aHospedeiro Animal
653 $aEctoparasita
653 $aSistema imunológico
700 1 $aSOUSA, M. F.
700 1 $aVIEIRA, J. I. G.
700 1 $aMORAIS, L. R. de
700 1 $aFERNANDES, A. A. S.
700 1 $aLITTIERE, T. de O.
700 1 $aOTTO, P. I.
700 1 $aMACHADO, M. A.
700 1 $aSILVA, M. V. G. B.
700 1 $aBONAFÉ, C. M.
700 1 $aMAGALHÃES, A. F. B.
700 1 $aVERARDO, L. L.
773 $tJournal of Applied Animal Research$gv. 50, n. 1, p. 460-470, 2022.
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Registro original: |
Embrapa Gado de Leite (CNPGL) |
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Registro Completo
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Biblioteca(s): |
Embrapa Soja. |
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Data corrente: |
30/09/2015 |
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Data da última atualização: |
21/08/2018 |
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Tipo da produção científica: |
Resumo em Anais de Congresso |
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Autoria: |
KATO, M.; SOARES, R. M.; AKAMATSU, H.; YAMANAKA, N. |
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Afiliação: |
M. KATO, JIRCAS, Japan.; RAFAEL MOREIRA SOARES, CNPSO; H. AKAMATSU, NARC, Japan.; N. YAMANAKA, JIRCAS, Japan. |
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Título: |
Reação de genótipos de soja diferenciadores à ferrugem da soja coletada no Brasil entre 2011 e 2014. |
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Ano de publicação: |
2015 |
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Fonte/Imprenta: |
In: CONGRESSO BRASILEIRO DE FITOPATOLOGIA, 48.; CONGRESSO BRASILEIRO DE PATOLOGIA PÓS COLHEITA, 2., 2015, São Pedro, SP. Fitopatologia de precisão - fronteiras da ciência: anais. [Brasilia, DF]: Sociedade Brasileira de Fitopatologia, 2015. |
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Descrição Física: |
1 CD-ROM. |
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Idioma: |
Inglês |
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Conteúdo: |
Asian soybean rust (ASR) is one of the important diseases which reduce soybean yield. Most economic control measure of the disease is the use of genetic resistance. To effectiveness of resistance genes to ASR, soybean reactions of differential genotypes were monitored during four cropping seasons from 2010/11 to 2013/14. Samples of leaflets infected with rust were collected from soybean fields in states of Rio Grande do Sul, Paraná, Mato Grosso do Sul, Mato Grosso, Goiás, Distrito Federal and Rondônia. Sixteen differential genotypes (18 in 2012/13 and 2013/14) for soybean rust, having resistance gene, Rpp1-Rpp6, Rpp2+Rpp4+Rpp5, and without resistance genes were inoculated with urediniospores collected from 19 samples. Soybean reaction was rated approximately 14 days after inoculation based on the number of uredinia per lesion and sporulation level. There was no clear evidence of geographical and temporal differentiation. Of the sixteen differentials used for all seasons, Shiranui (Rpp5), PI 587855 (Rpp1-b), PI 587880A (Rpp1-b), PI 587905 (Rpp1-b) and PI 594767A (Rpp1-b) showed a resistant reaction to half or more of samples throughout the period. No6-12 having Rpp2+Rpp4+Rpp5 was resistant to all the samples collected 2012/13 and 2013/14. There was a tendency that PI 459025 (Rpp4) increased the proportion of resistant reactions over the period. |
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Palavras-Chave: |
Asian soybean rust; ASR. |
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Thesagro: |
Doença de Planta; Ferrugem; Soja. |
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Thesaurus NAL: |
Plant diseases and disorders; Soybean rust; Soybeans. |
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Categoria do assunto: |
F Plantas e Produtos de Origem Vegetal |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/130516/1/395-1.pdf
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Marc: |
LEADER 02260nam a2200253 a 4500
001 2025412
005 2018-08-21
008 2015 bl uuuu u00u1 u #d
100 1 $aKATO, M.
245 $aReação de genótipos de soja diferenciadores à ferrugem da soja coletada no Brasil entre 2011 e 2014.
260 $aIn: CONGRESSO BRASILEIRO DE FITOPATOLOGIA, 48.; CONGRESSO BRASILEIRO DE PATOLOGIA PÓS COLHEITA, 2., 2015, São Pedro, SP. Fitopatologia de precisão - fronteiras da ciência: anais. [Brasilia, DF]: Sociedade Brasileira de Fitopatologia$c2015
300 $c1 CD-ROM.
520 $aAsian soybean rust (ASR) is one of the important diseases which reduce soybean yield. Most economic control measure of the disease is the use of genetic resistance. To effectiveness of resistance genes to ASR, soybean reactions of differential genotypes were monitored during four cropping seasons from 2010/11 to 2013/14. Samples of leaflets infected with rust were collected from soybean fields in states of Rio Grande do Sul, Paraná, Mato Grosso do Sul, Mato Grosso, Goiás, Distrito Federal and Rondônia. Sixteen differential genotypes (18 in 2012/13 and 2013/14) for soybean rust, having resistance gene, Rpp1-Rpp6, Rpp2+Rpp4+Rpp5, and without resistance genes were inoculated with urediniospores collected from 19 samples. Soybean reaction was rated approximately 14 days after inoculation based on the number of uredinia per lesion and sporulation level. There was no clear evidence of geographical and temporal differentiation. Of the sixteen differentials used for all seasons, Shiranui (Rpp5), PI 587855 (Rpp1-b), PI 587880A (Rpp1-b), PI 587905 (Rpp1-b) and PI 594767A (Rpp1-b) showed a resistant reaction to half or more of samples throughout the period. No6-12 having Rpp2+Rpp4+Rpp5 was resistant to all the samples collected 2012/13 and 2013/14. There was a tendency that PI 459025 (Rpp4) increased the proportion of resistant reactions over the period.
650 $aPlant diseases and disorders
650 $aSoybean rust
650 $aSoybeans
650 $aDoença de Planta
650 $aFerrugem
650 $aSoja
653 $aAsian soybean rust
653 $aASR
700 1 $aSOARES, R. M.
700 1 $aAKAMATSU, H.
700 1 $aYAMANAKA, N.
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Registro original: |
Embrapa Soja (CNPSO) |
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