02511naa a2200421 a 450000100080000000500110000800800410001910000200006024501030008026000090018352013120019265000150150465000140151965000330153365000300156665000280159665000180162465000190164265000180166165000140167965000270169365000320172065000140175265000210176665000170178765000220180465000160182665000240184265000100186665000110187665300150188765300080190270000200191070000310193070000200196170000190198177300890200019631462013-08-02       2013    bl uuuu     u00u1 u    #d1 aSAWAZAKI, H. E.  aMolecular diagnosis optimization of virus, bacteria and fungi in sugarcane.h[electronic resource]  c2013  aAbstract: Aiming at optimizing the diagnosis of major sugarcane diseases by PCR, primers were developed (scald, orange rust) and amplified fragments according to the literature were used as positive control, such as those caused by: 1 - Bacteria, (ratoon stunting and leaf scald) 2 - Viruses, (yellow leaf, mosaic, mosaic streak and fijivirus) 3-Fungus, (smut, orange rust and curvularia). For diseases with long latency period (leaf scald, ratoon stunting, yellow leaf, mosaic, fijivirus, smut and orange rust), primers were designed for real time PCR. For testing, infected leaves, fungal colonies, amplified DNA fragment or 40 seedlings were used. Real time PCR analyses have enabled the detection of sugarcane samples with highest dilution of DNA. The pair of primers designed for orange rust was more specific. The pair of primers designed for scald, apparently was not able to distinguish only bacteria of the genus Erwinia, whereas the primers described in the literature were observed amplify others genera, such as Xanthomonas, Pseudomonas, Erwinia, Stenotrophomona and Pantoea. The three strains of the fungus curvularia, found in sugarcane, resembled more to the species C.cymbopogonis, C.geniculata, C.sp. Of the 28 primer pairs tested, the best were shown for each of the disease-causing agent.  aCurvularia  aFijivirus  aPlant diseases and disorders  aPolymerase chain reaction  aRatoon stunting disease  aRust diseases  aScald diseases  aSmut diseases  aSugarcane  aSugarcane streak virus  aSugarcane yellow leaf virus  aBactéria  aCana de açúcar  aDiagnóstico  aDoença de planta  aEscaldadura  aFerrugem alaranjada  aFungo  aVírus  aLeaf scald  aPCR1 aSA, L. A. N. de1 aGONÇALVES, C. R. N. C. B.1 aVEIGA, R. F. A.1 aCOLOMBO, C. A.  tInternacional Research Journal of Plant Science, Sapelegv. 4, n. 3, p. 76-83, 2013.