02243naa a2200277 a 450000100080000000500110000800800410001902400590006010000200011924501410013926000090028052012690028965000210155865300230157965300260160265300380162865300360166665300320170265300220173465300370175665300200179370000180181370000210183170000230185277300900187520775042017-10-17 2014 bl uuuu u00u1 u #d7 ahttp://dx.doi.org/10.1590/S0100-736X20140002000062DOI1 aROJAS, T. C. G. aIn silico phylogenetic and virulence gene profile analyses of avian pathogenic Escherichia coli genome sequences.h[electronic resource] c2014 aAvian pathogenic Escherichia coli (APEC) infections are responsible for significant losses in the poultry industry worldwide. A zoonotic risk has been attributed to APEC strains because they present similarities to extraintestinal pathogenic E. coli (ExPEC) associated with illness in humans, mainly urinary tract infections and neonatal meningitis. Here, we present in silico analyses with pathogenic E. coli genome sequences, including recently available APEC genomes. The phylogenetic tree, based on multi-locus sequence typing (MLST) of seven housekeeping genes, revealed high diversity in the allelic composition. Nevertheless, despite this diversity, the phylogenetic tree was able to cluster the different pathotypes together. An in silico virulence gene profile was also determined for each of these strains, through the presence or absence of 83 well-known virulence genes/traits described in pathogenic E. coli strains. The MLST phylogeny and the virulence gene profiles demonstrated a certain genetic similarity between Brazilian APEC strains, APEC isolated in the United States, UPEC (uropathogenic E. coli) and diarrheagenic strains isolated from humans. This correlation corroborates and reinforces the zoonotic potential hypothesis proposed to APEC. aEscherichia Coli aAnálise in silico aÁrvore filogenética aAvian pathogenic Escherichia coli aGenes associados à virulência aMulti-locus Sequence Typing aPhylogenetic tree aTipagem de sequência multilocus aVirulence genes1 aMALUTA, R. P.1 aKOENIGKAN, L. V.1 aSILVEIRA, W. D. da tPesquisa Veterinária Brasileira, Rio de Janeirogv. 34, n. 2, p. 129-133, fev. 2014.