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 | Acesso ao texto completo restrito à biblioteca da Embrapa Soja. Para informações adicionais entre em contato com valeria.cardoso@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Soja. |
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Data corrente: |
05/01/2012 |
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Data da última atualização: |
19/07/2024 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
KULCHESKI, F. R.; OLIVEIRA, L. F. V.; MOLINA, L. G.; ALMERAO, M. P.; RODRIGUES, F. A.; MARCOLINO, J.; BARBOSA, J. F.; STOLF-MOREIRA, R.; NEPOMUCENO, A. L.; MARCELINO-GUIMARÃES, F. C.; ABDELNOOR, R. V.; NASCIMENTO, L. C.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; MARGIS, R. |
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Afiliação: |
FRANCELI R. KULCHESKI, UFRGS; LUIZ F. V. DE OLIVEIRA, UFRGS; LORRAYNE G. MOLINA, UFRGS; MAURÍCIO P. ALMERÃO, UFRGS; FABIANA A. RODRIGUES; JULIANA MARCOLINO; JOICE F. BARBOSA; RENATA STOLF MOREIRA; ALEXANDRE LIMA NEPOMUCENO, SRI; FRANCISMAR CORREA MARCELINO GUIMARÃES, CNPSO; RICARDO VILELA ABDELNOOR, CNPSO; LEANDRO C. NASCIMENTO, UNICAMP; MARCELO F. CARAZZOLLE, UNICAMP; GONÇALO A. G. PEREIRA, UNICAMP; ROGÉRIO MARGIS, UFRGS. |
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Título: |
Identification of novel soybean microRNAs involved in abiotic and biotic stresses. |
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Ano de publicação: |
2011 |
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Fonte/Imprenta: |
BMC Genomics, v. 12, article 307, jun. 2011. |
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Páginas: |
17 p. |
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DOI: |
10.1186/1471-2164-12-307 |
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Idioma: |
Inglês |
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Conteúdo: |
Background: Small RNAs (19-24 nt) are key regulators of gene expression that guide both transcriptional and posttranscriptional silencing mechanisms in eukaryotes. Current studies have demonstrated that microRNAs (miRNAs) act in several plant pathways associated with tissue proliferation, differentiation, and development and in response to abiotic and biotic stresses. In order to identify new miRNAs in soybean and to verify those that are possibly water deficit and rust-stress regulated, eight libraries of small RNAs were constructed and submitted to Solexa sequencing. Results: The libraries were developed from drought-sensitive and tolerant seedlings and rust-susceptible and resistant soybeans with or without stressors. Sequencing the library and subsequent analyses detected 256 miRNAs. From this total, we identified 24 families of novel miRNAs that had not been reported before, six families of conserved miRNAs that exist in other plants species, and 22 families previously reported in soybean. We also observed the presence of several isomiRNAs during our analyses. To validate novel miRNAs, we performed RT-qPCR across the eight different libraries. Among the 11 miRNAs analyzed, all showed different expression profiles during biotic and abiotic stresses to soybean. The majority of miRNAs were up-regulated during water deficit stress in the sensitive plants. However, for the tolerant genotype, most of the miRNAs were down regulated. The pattern of miRNAs expression was also different for the distinct genotypes submitted to the pathogen stress. Most miRNAs were down regulated during the fungus infection in the susceptible genotype; however, in the resistant genotype, most miRNAs did not vary during rust attack. A prediction of the putative targets was carried out for conserved and novel miRNAs families. Conclusions: Validation of our results with quantitative RT-qPCR revealed that Solexa sequencing is a powerful tool for miRNA discovery. The identification of differentially expressed plant miRNAs provides molecular evidence for the possible involvement of miRNAs in the process of water deficit- and rust-stress responses. MenosBackground: Small RNAs (19-24 nt) are key regulators of gene expression that guide both transcriptional and posttranscriptional silencing mechanisms in eukaryotes. Current studies have demonstrated that microRNAs (miRNAs) act in several plant pathways associated with tissue proliferation, differentiation, and development and in response to abiotic and biotic stresses. In order to identify new miRNAs in soybean and to verify those that are possibly water deficit and rust-stress regulated, eight libraries of small RNAs were constructed and submitted to Solexa sequencing. Results: The libraries were developed from drought-sensitive and tolerant seedlings and rust-susceptible and resistant soybeans with or without stressors. Sequencing the library and subsequent analyses detected 256 miRNAs. From this total, we identified 24 families of novel miRNAs that had not been reported before, six families of conserved miRNAs that exist in other plants species, and 22 families previously reported in soybean. We also observed the presence of several isomiRNAs during our analyses. To validate novel miRNAs, we performed RT-qPCR across the eight different libraries. Among the 11 miRNAs analyzed, all showed different expression profiles during biotic and abiotic stresses to soybean. The majority of miRNAs were up-regulated during water deficit stress in the sensitive plants. However, for the tolerant genotype, most of the miRNAs were down regulated. The pattern of miRNAs expression was also di... Mostrar Tudo |
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Thesagro: |
Deficiência hídrica; Gene marcador; Soja. |
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Thesaurus Nal: |
Gene expression; Soil water deficit; Soybeans. |
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Categoria do assunto: |
P Recursos Naturais, Ciências Ambientais e da Terra |
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Marc: |
LEADER 03244naa a2200385 a 4500
001 1911802
005 2024-07-19
008 2011 bl uuuu u00u1 u #d
024 7 $a10.1186/1471-2164-12-307$2DOI
100 1 $aKULCHESKI, F. R.
245 $aIdentification of novel soybean microRNAs involved in abiotic and biotic stresses.$h[electronic resource]
260 $c2011
300 $a17 p.
520 $aBackground: Small RNAs (19-24 nt) are key regulators of gene expression that guide both transcriptional and posttranscriptional silencing mechanisms in eukaryotes. Current studies have demonstrated that microRNAs (miRNAs) act in several plant pathways associated with tissue proliferation, differentiation, and development and in response to abiotic and biotic stresses. In order to identify new miRNAs in soybean and to verify those that are possibly water deficit and rust-stress regulated, eight libraries of small RNAs were constructed and submitted to Solexa sequencing. Results: The libraries were developed from drought-sensitive and tolerant seedlings and rust-susceptible and resistant soybeans with or without stressors. Sequencing the library and subsequent analyses detected 256 miRNAs. From this total, we identified 24 families of novel miRNAs that had not been reported before, six families of conserved miRNAs that exist in other plants species, and 22 families previously reported in soybean. We also observed the presence of several isomiRNAs during our analyses. To validate novel miRNAs, we performed RT-qPCR across the eight different libraries. Among the 11 miRNAs analyzed, all showed different expression profiles during biotic and abiotic stresses to soybean. The majority of miRNAs were up-regulated during water deficit stress in the sensitive plants. However, for the tolerant genotype, most of the miRNAs were down regulated. The pattern of miRNAs expression was also different for the distinct genotypes submitted to the pathogen stress. Most miRNAs were down regulated during the fungus infection in the susceptible genotype; however, in the resistant genotype, most miRNAs did not vary during rust attack. A prediction of the putative targets was carried out for conserved and novel miRNAs families. Conclusions: Validation of our results with quantitative RT-qPCR revealed that Solexa sequencing is a powerful tool for miRNA discovery. The identification of differentially expressed plant miRNAs provides molecular evidence for the possible involvement of miRNAs in the process of water deficit- and rust-stress responses.
650 $aGene expression
650 $aSoil water deficit
650 $aSoybeans
650 $aDeficiência hídrica
650 $aGene marcador
650 $aSoja
700 1 $aOLIVEIRA, L. F. V.
700 1 $aMOLINA, L. G.
700 1 $aALMERAO, M. P.
700 1 $aRODRIGUES, F. A.
700 1 $aMARCOLINO, J.
700 1 $aBARBOSA, J. F.
700 1 $aSTOLF-MOREIRA, R.
700 1 $aNEPOMUCENO, A. L.
700 1 $aMARCELINO-GUIMARÃES, F. C.
700 1 $aABDELNOOR, R. V.
700 1 $aNASCIMENTO, L. C.
700 1 $aCARAZZOLLE, M. F.
700 1 $aPEREIRA, G. A. G.
700 1 $aMARGIS, R.
773 $tBMC Genomics$gv. 12, article 307, jun. 2011.
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Registro original: |
Embrapa Soja (CNPSO) |
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Biblioteca(s): |
Embrapa Pecuária Sul. |
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Data corrente: |
14/12/2017 |
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Data da última atualização: |
15/12/2017 |
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Tipo da produção científica: |
Comunicado Técnico/Recomendações Técnicas |
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Autoria: |
BENAVIDES, M. V.; MINHO, A. P. |
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Afiliação: |
MAGDA VIEIRA BENAVIDES, CPPSUL; ALESSANDRO PELEGRINE MINHO, CPPSUL. |
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Título: |
É possível estimar a eficiência real dos anti-helmínticos por meio de testes in vitro? |
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Ano de publicação: |
2017 |
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Fonte/Imprenta: |
Bagé: Embrapa Pecuária Sul, 2017. |
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Páginas: |
6 p. |
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Série: |
(Embrapa Pecuária Sul. Comunicado técnico, 97). |
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ISSN: |
1982-5382 |
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Idioma: |
Português |
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Conteúdo: |
Vantagens e desvantagens dos testes de campo e laboratoriais serão, portanto, abordados neste Comunicado Técnico, que tem por objetivo mostrar a técnicos e ovinocultores (a) os fundamentos dos atuais testes de campo para a avaliação dos isolados de parasitos de animais de campo como resistentes (ou não) a princípios ativos, e (b) os avanços obtidos com os testes laboratoriais de antiparasitários na esperança de facilitar a identificação do antihelmíntico mais recomendado, sem a necessidade de testes a campo. |
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Thesagro: |
Anti-helmíntico; Helminto; Ovino; Verminose. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/169049/1/CoT-97-online.pdf
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Marc: |
LEADER 01127nam a2200205 a 4500
001 2082596
005 2017-12-15
008 2017 bl uuuu u0uu1 u #d
022 $a1982-5382
100 1 $aBENAVIDES, M. V.
245 $aÉ possível estimar a eficiência real dos anti-helmínticos por meio de testes in vitro?$h[electronic resource]
260 $aBagé: Embrapa Pecuária Sul$c2017
300 $a6 p.
490 $a(Embrapa Pecuária Sul. Comunicado técnico, 97).
520 $aVantagens e desvantagens dos testes de campo e laboratoriais serão, portanto, abordados neste Comunicado Técnico, que tem por objetivo mostrar a técnicos e ovinocultores (a) os fundamentos dos atuais testes de campo para a avaliação dos isolados de parasitos de animais de campo como resistentes (ou não) a princípios ativos, e (b) os avanços obtidos com os testes laboratoriais de antiparasitários na esperança de facilitar a identificação do antihelmíntico mais recomendado, sem a necessidade de testes a campo.
650 $aAnti-helmíntico
650 $aHelminto
650 $aOvino
650 $aVerminose
700 1 $aMINHO, A. P.
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