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Biblioteca(s): |
Embrapa Agrobiologia. |
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Data corrente: |
27/09/2022 |
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Data da última atualização: |
27/09/2022 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
FERREIRA, N. dos S.; GONIGLIO, A.; PUENTE, M.; SANTANNA, F. H.; MARONICHE, G.; GARCIA, J.; MOLINA, R.; NIEVAS, S.; VOLPIANO, C. G.; AMBROSINI, A.; PASSAGLIA, L. M. P.; PEDRAZA, R. O.; REIS, V. M.; ZILLI, J. E.; CASSAN, F. |
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Afiliação: |
NATÁLIA DOS SANTOS FERREIRA, UFRRJ; ANAHÍ CONIGLIO, Universidad Nacional de Río Cuarto; MARIANA PUENTE, INTA; FERNANDO HAYASHI SANT'ANNA, PROAD-SUS; GUILLERMO MARONICHE, Universidad Nacional de Mar del Plata; JULIA GARCÍA, INTA; ROMINA MOLINA, UNIVERSIDAD NACIONAL DE RIO CUARTO; SOFIA NIEVAS, UNIVERSIDAD NACIONAL DE RIO CUARTO; CAMILA GAZOLLA VOLPIANO, UFGRS; ADRIANA AMBROSINI, UFRGS; LUCIANE M P PASSAGLIA, UFRGS; RAUL O. PEDRAZA, Universidad Nacional de Tucumán; VERONICA MASSENA REIS, CNPAB; JERRI EDSON ZILLI, CNPAB; FABRICIO CASSAN, Universidad Nacional de Río Cuarto. |
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Título: |
Genome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov. |
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Ano de publicação: |
2022 |
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Fonte/Imprenta: |
International Journal of Systematic and Evolutionary Microbiology, v. 72, n. 8, aug. 2022. |
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ISSN: |
1466-5034 |
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DOI: |
0.1099/ijsem.0.005475 |
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Idioma: |
Inglês |
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Conteúdo: |
Strain Az39T of Azospirillum is a diazotrophic plant growth-promoting bacterium isolated in 1982 from the roots of wheat plants growing in Marcos Juárez, Córdoba, Argentina. It produces indole-3-acetic acid in the presence of l-tryptophan as a precursor, grows at 20-38 °C (optimal 38 °C), and the cells are curved or spiral-shaped, with diameters ranging from 0.5-0.9 to 1.8-2.2 µm. They contain C16 : 0, C18 : 0 and C18 : 1 ω7c/ω6c as the main fatty acids. Phylogenetic analysis of its 16S rRNA gene sequence confirmed that this strain belongs to the genus Azospirillum, showing a close relationship with Azospirillum baldaniorum Sp245T, Azospirillum brasilense Sp7T and Azospirillum formosense CC-Nfb-7T. Housekeeping gene analysis revealed that Az39T, together with five strains of the genus (Az19, REC3, BR 11975, MTCC4035 and MTCC4036), form a cluster apart from A. baldaniorum Sp245T, A. brasilense Sp7T and A. formosense CC-Nfb-7T. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) between Az39T and the aforementioned type strains revealed values below 96 %, the circumscription limit for the species delineation (ANI: 95.3, 94.1 and 94.0 %; dDDH: 62.9, 56.3 and 55.6 %). Furthermore, a phylogeny evaluation of the core proteome, including 809 common shared proteins, showed an independent grouping of Az39T, Az19, REC3, BR 11975, MTCC4035 and MTCC4036. The G+C content in the genomic DNA of these six strains varied from 68.3 to 68.5 %. Based on the combined phylogenetic, genomic and phenotypic characterization presented here, we consider that strain Az39T, along with strains Az19, REC3, BR 11975, MTCC4035 and MTCC4036, are members of a new Azospirillum species, for which the name Azospirillum argentinense sp. nov. is proposed. The type strain is Az39T (=LBPCV39T=BR 148428T=CCCT 22.01T). MenosStrain Az39T of Azospirillum is a diazotrophic plant growth-promoting bacterium isolated in 1982 from the roots of wheat plants growing in Marcos Juárez, Córdoba, Argentina. It produces indole-3-acetic acid in the presence of l-tryptophan as a precursor, grows at 20-38 °C (optimal 38 °C), and the cells are curved or spiral-shaped, with diameters ranging from 0.5-0.9 to 1.8-2.2 µm. They contain C16 : 0, C18 : 0 and C18 : 1 ω7c/ω6c as the main fatty acids. Phylogenetic analysis of its 16S rRNA gene sequence confirmed that this strain belongs to the genus Azospirillum, showing a close relationship with Azospirillum baldaniorum Sp245T, Azospirillum brasilense Sp7T and Azospirillum formosense CC-Nfb-7T. Housekeeping gene analysis revealed that Az39T, together with five strains of the genus (Az19, REC3, BR 11975, MTCC4035 and MTCC4036), form a cluster apart from A. baldaniorum Sp245T, A. brasilense Sp7T and A. formosense CC-Nfb-7T. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) between Az39T and the aforementioned type strains revealed values below 96 %, the circumscription limit for the species delineation (ANI: 95.3, 94.1 and 94.0 %; dDDH: 62.9, 56.3 and 55.6 %). Furthermore, a phylogeny evaluation of the core proteome, including 809 common shared proteins, showed an independent grouping of Az39T, Az19, REC3, BR 11975, MTCC4035 and MTCC4036. The G+C content in the genomic DNA of these six strains varied from 68.3 to 68.5 %. Based on the comb... Mostrar Tudo |
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Palavras-Chave: |
Proteome core. |
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Thesaurus Nal: |
Azospirillum; Phylogeny. |
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Categoria do assunto: |
S Ciências Biológicas |
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Marc: |
LEADER 02871naa a2200349 a 4500
001 2146886
005 2022-09-27
008 2022 bl uuuu u00u1 u #d
022 $a1466-5034
024 7 $a0.1099/ijsem.0.005475$2DOI
100 1 $aFERREIRA, N. dos S.
245 $aGenome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov.$h[electronic resource]
260 $c2022
520 $aStrain Az39T of Azospirillum is a diazotrophic plant growth-promoting bacterium isolated in 1982 from the roots of wheat plants growing in Marcos Juárez, Córdoba, Argentina. It produces indole-3-acetic acid in the presence of l-tryptophan as a precursor, grows at 20-38 °C (optimal 38 °C), and the cells are curved or spiral-shaped, with diameters ranging from 0.5-0.9 to 1.8-2.2 µm. They contain C16 : 0, C18 : 0 and C18 : 1 ω7c/ω6c as the main fatty acids. Phylogenetic analysis of its 16S rRNA gene sequence confirmed that this strain belongs to the genus Azospirillum, showing a close relationship with Azospirillum baldaniorum Sp245T, Azospirillum brasilense Sp7T and Azospirillum formosense CC-Nfb-7T. Housekeeping gene analysis revealed that Az39T, together with five strains of the genus (Az19, REC3, BR 11975, MTCC4035 and MTCC4036), form a cluster apart from A. baldaniorum Sp245T, A. brasilense Sp7T and A. formosense CC-Nfb-7T. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) between Az39T and the aforementioned type strains revealed values below 96 %, the circumscription limit for the species delineation (ANI: 95.3, 94.1 and 94.0 %; dDDH: 62.9, 56.3 and 55.6 %). Furthermore, a phylogeny evaluation of the core proteome, including 809 common shared proteins, showed an independent grouping of Az39T, Az19, REC3, BR 11975, MTCC4035 and MTCC4036. The G+C content in the genomic DNA of these six strains varied from 68.3 to 68.5 %. Based on the combined phylogenetic, genomic and phenotypic characterization presented here, we consider that strain Az39T, along with strains Az19, REC3, BR 11975, MTCC4035 and MTCC4036, are members of a new Azospirillum species, for which the name Azospirillum argentinense sp. nov. is proposed. The type strain is Az39T (=LBPCV39T=BR 148428T=CCCT 22.01T).
650 $aAzospirillum
650 $aPhylogeny
653 $aProteome core
700 1 $aGONIGLIO, A.
700 1 $aPUENTE, M.
700 1 $aSANTANNA, F. H.
700 1 $aMARONICHE, G.
700 1 $aGARCIA, J.
700 1 $aMOLINA, R.
700 1 $aNIEVAS, S.
700 1 $aVOLPIANO, C. G.
700 1 $aAMBROSINI, A.
700 1 $aPASSAGLIA, L. M. P.
700 1 $aPEDRAZA, R. O.
700 1 $aREIS, V. M.
700 1 $aZILLI, J. E.
700 1 $aCASSAN, F.
773 $tInternational Journal of Systematic and Evolutionary Microbiology$gv. 72, n. 8, aug. 2022.
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| 1. |  | ANTUNES, A. C.; MONTANARIN, A.; GRÄBIN, D. M.; MONTEIRO, E. C. dos S. M.; PINHO, F. F. de; ALVARENGA, G. C.; AHUMADA, J.; WALLACE, R. B.; RAMALHO, E. E.; BARNETT, A. P. A.; BAGER, A.; LOPES, A. M. C.; KEUROGHLIAN, A.; GIROUX, A.; HERRERA, A. M.; CORREA, A. P. de A.; MEIGA, A. Y.; JÁCOMO, A. T. de A.; BARBAN, A. de B.; ANTUNES, A.; COELHO, A. G. de A.; CAMILO, A. R.; NUNES, A. V.; GOMES, A. C. dos S. M.; ZANZINI, A. C. da S.; CASTRO, A. B.; DESBIEZ, A. L. J.; FIGUEIREDO, A.; THOISY, B. de; GAUZENS, B.; OLIVEIRA, B. T.; LIMA, C. A. de; PERES, C. A.; DURIGAN, C. C.; BROCARDO, C. R.; ROSA, C. A.; ZÁRATE CASTAÑEDA, C.; MONTEZA MORENO, C. M.; CARNICER, C.; TRINCA, C. T.; POLLI, D. J.; FERRAZ, D. da S.; LANE, D. F.; ROCHA, D. G. da; BARCELOS, D. C.; AUZ, D.; ROSA, D. C. P.; SILVA, D. A.; SILVÉRIO, D. V.; EATON, D. P.; NAKANO OLIVEIRA, E.; VENTICINQUE, E.; JUNIOR, E. C.; MENDONÇA, E. N.; VIEIRA, E. M.; ISASI CATALÁ, E.; FISCHER, E.; CASTRO, E. P.; OLIVEIRA, E. G.; MELO, F. R. de; MUNIZ, F. de L.; ROHE, F.; BACCARO, F. B.; MICHALSKI, F.; PAIM, F. P.; SANTOS, F.; ANAGUANO, F.; PALMEIRA, F. B. L.; REIS, F. da S.; AGUIAR SILVA, F. H.; BATISTA, G. de A. B.; ZAPATA RÍOS, G.; FORERO MEDINA, G.; NETO, G. de S. F.; ALVES, G. B.; AYALA, G.; PEDERSOLI, G. H. P.; EL BIZRI, HANI R.; PRADO, H. A.; MOZERLE, H. B.; COSTA, H. C. M.; LIMA, I. J.; PALACIOS, J.; ASSIS, J. de R.; BOUBLI, J. P.; METZGER, J. P.; TEIXEIRA, J. V.; MIRANDA, J. M. D.; POLISAR, J.; SALVADOR, J.; BORGES ALMEIDA, K.; DIDIER, K.; PEREIRA, K. D. de L.; TORRALVO, K.; GAJAPERSAD, K.; SILVEIRA, L.; MAIOLI, L. U.; MARACAHIPES SANTOS, L.; VALENZUELA, L.; BENAVALLI, L.; FLETCHER, L.; PAOLUCCI, L. N.; ZANZINI, L. P.; DA SILVA, L. Z.; RODRIGUES, L. C. R.; BENCHIMOL, M.; OLIVEIRA, M. A.; LIMA, M.; DA SILVA, M. B.; SANTOS JUNIOR, M. A. dos; VISCARRA, M.; COHN HAFT, M.; ABRAHAMS, M. I.; BENEDETTI, M. A.; MARMONTEL, M.; HIRT, M. R.; TÔRRES, N. M.; CRUZ JUNIOR, O. F.; ALVAREZ LOAYZA, P.; JANSEN, P.; PRIST, P. R.; BRANDO, P. M.; PERÔNICO, P. B.; LEITE, R. do N.; RABELO, R. M.; SOLLMANN, R.; BELTRÃO MENDES, R.; FERREIRA, R. A. F.; COUTINHO, R.; OLIVEIRA, R. da C.; ILHA, R.; HILÁRIO, R. R.; PIRES, R. A. P.; SAMPAIO, R.; MOREIRA, R. da S.; BOTERO ARIAS, R.; MARTINEZ, R. V.; NÓBREGA, R. A. de A.; FADINI, R. F.; MORATO, R. G.; CARNEIRO, R. L.; ALMEIDA, R. P. S.; RAMOS, R. M.; SCHAUB, R.; DORNAS, R.; CUEVA, RUBÉN; ROLIM, S.; LAURINDO, S.; ESPINOSA, S.; FERNANDES, T. N.; SANAIOTTI, T. M.; ALVIM, T. H. G.; DORNAS, TIAGO TEIXEIRA; PIÑA, T. E. N.; ANDRADE, V. L. C.; SANTIAGO, W. T. V.; MAGNUSSON, W. E.; CAMPOS, Z.; RIBEIRO, M. C. Amazonia Camtrap: a data set of mammal, bird, and reptile species recorded with camera traps in the Amazon forest. Ecology, v. 103, n. 9, p. e3738, 2022. Datar Paper.| Biblioteca(s): Embrapa Pantanal. |
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