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 | Acesso ao texto completo restrito à biblioteca da Embrapa Pecuária Sul. Para informações adicionais entre em contato com cppsul.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Pecuária Sul. |
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Data corrente: |
02/09/2021 |
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Data da última atualização: |
02/09/2021 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
FERREIRA, C. E. R.; CAMPOS, G. S.; SCHMIDT, P. I.; SOLLERO, B. P.; GOULARTE, K. L.; CORCINI, C. D.; GASPERIN, B. G.; LUCIA JUNIOR, T.; BOLIGON, A. A.; CARDOSO, F. F. |
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Afiliação: |
CARLOS E. R. FERREIRA, UFPEL; GABRIEL S. CAMPOS, UFPEL; PATRICIA I. SCHMIDT, UNESP; BRUNA PENA SOLLERO, CPPSUL; KARINA L. GOULARTE, UFPEL; CARINE D. CORCINI, UFPEL; BERNARDO G. GASPERIN, UFPEL; THOMAZ LUCIA JUNIOR, UFPEL; ARIONE A. BOLIGON, UFPEL; FERNANDO FLORES CARDOSO, CPPSUL. |
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Título: |
Genome-wide association and genomic prediction for scrotal circumference in Hereford and Braford bulls. |
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Ano de publicação: |
2021 |
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Fonte/Imprenta: |
Theriogenology, v. 172, p. 268-280, Sept. 2021. |
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DOI: |
https://doi.org/10.1016/j.theriogenology.2021.07.007 |
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Idioma: |
Inglês |
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Conteúdo: |
Scrotal circumference (SC) is widely used as a selection criterion for bulls in breeding programs, since it is easily assessed and correlated with several desirable reproductive traits. The objectives of this study were: to perform a genome-wide association study (GWAS) to identify genomic regions associated with SC adjusted for age (SCa) and for both age and weight (SCaw); to select Tag SNPs from GWAS to construct low-density panel for genomic prediction; and to compare the prediction accuracy of the SC through different methods for Braford and Hereford bulls from the same genetic breeding program. Data of SC from 18,172 bulls (30.4 ± 3.7 cm) and of genotypes from 131 sires and 3,545 animals were used. From GWAS, the top 1% of 1-Mb windows were observed on chromosome (BTA) 2, 20, 7, 8, 15, 3, 16, 27, 6 and 8 for SCa and on BTA 8, 15, 16, 21, 19, 2, 6, 5 and 10 for SCaw, representing 17.4% and 18.8% of the additive genetic variance of SCa and SCaw, respectively. The MeSH analysis was able to translate genomic information providing biological meanings of more specific gene functions related to the SCa and SCaw. The genomic enhancement methods, especially single step GBLUP, that combined phenotype and pedigree data with direct genomic values generated gains in accuracy in relation to pedigree BLUP, suggesting that genomic predictions should be applied to improve genetic gain and to narrow the generation interval compared to traditional methods. The proposed Tag-SNP panels may be useful for lower-cost commercial genomic prediction applications in the future, when the number of bulls in the reference population increases for SC in Hereford and Braford breeds. MenosScrotal circumference (SC) is widely used as a selection criterion for bulls in breeding programs, since it is easily assessed and correlated with several desirable reproductive traits. The objectives of this study were: to perform a genome-wide association study (GWAS) to identify genomic regions associated with SC adjusted for age (SCa) and for both age and weight (SCaw); to select Tag SNPs from GWAS to construct low-density panel for genomic prediction; and to compare the prediction accuracy of the SC through different methods for Braford and Hereford bulls from the same genetic breeding program. Data of SC from 18,172 bulls (30.4 ± 3.7 cm) and of genotypes from 131 sires and 3,545 animals were used. From GWAS, the top 1% of 1-Mb windows were observed on chromosome (BTA) 2, 20, 7, 8, 15, 3, 16, 27, 6 and 8 for SCa and on BTA 8, 15, 16, 21, 19, 2, 6, 5 and 10 for SCaw, representing 17.4% and 18.8% of the additive genetic variance of SCa and SCaw, respectively. The MeSH analysis was able to translate genomic information providing biological meanings of more specific gene functions related to the SCa and SCaw. The genomic enhancement methods, especially single step GBLUP, that combined phenotype and pedigree data with direct genomic values generated gains in accuracy in relation to pedigree BLUP, suggesting that genomic predictions should be applied to improve genetic gain and to narrow the generation interval compared to traditional methods. The proposed Tag-SNP panels may ... Mostrar Tudo |
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Palavras-Chave: |
Desempenho reprodutivo; Predição genômica. |
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Thesagro: |
Bovino; Gado de Corte; Performance. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 02599naa a2200301 a 4500
001 2134027
005 2021-09-02
008 2021 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1016/j.theriogenology.2021.07.007$2DOI
100 1 $aFERREIRA, C. E. R.
245 $aGenome-wide association and genomic prediction for scrotal circumference in Hereford and Braford bulls.$h[electronic resource]
260 $c2021
520 $aScrotal circumference (SC) is widely used as a selection criterion for bulls in breeding programs, since it is easily assessed and correlated with several desirable reproductive traits. The objectives of this study were: to perform a genome-wide association study (GWAS) to identify genomic regions associated with SC adjusted for age (SCa) and for both age and weight (SCaw); to select Tag SNPs from GWAS to construct low-density panel for genomic prediction; and to compare the prediction accuracy of the SC through different methods for Braford and Hereford bulls from the same genetic breeding program. Data of SC from 18,172 bulls (30.4 ± 3.7 cm) and of genotypes from 131 sires and 3,545 animals were used. From GWAS, the top 1% of 1-Mb windows were observed on chromosome (BTA) 2, 20, 7, 8, 15, 3, 16, 27, 6 and 8 for SCa and on BTA 8, 15, 16, 21, 19, 2, 6, 5 and 10 for SCaw, representing 17.4% and 18.8% of the additive genetic variance of SCa and SCaw, respectively. The MeSH analysis was able to translate genomic information providing biological meanings of more specific gene functions related to the SCa and SCaw. The genomic enhancement methods, especially single step GBLUP, that combined phenotype and pedigree data with direct genomic values generated gains in accuracy in relation to pedigree BLUP, suggesting that genomic predictions should be applied to improve genetic gain and to narrow the generation interval compared to traditional methods. The proposed Tag-SNP panels may be useful for lower-cost commercial genomic prediction applications in the future, when the number of bulls in the reference population increases for SC in Hereford and Braford breeds.
650 $aBovino
650 $aGado de Corte
650 $aPerformance
653 $aDesempenho reprodutivo
653 $aPredição genômica
700 1 $aCAMPOS, G. S.
700 1 $aSCHMIDT, P. I.
700 1 $aSOLLERO, B. P.
700 1 $aGOULARTE, K. L.
700 1 $aCORCINI, C. D.
700 1 $aGASPERIN, B. G.
700 1 $aLUCIA JUNIOR, T.
700 1 $aBOLIGON, A. A.
700 1 $aCARDOSO, F. F.
773 $tTheriogenology$gv. 172, p. 268-280, Sept. 2021.
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Embrapa Pecuária Sul (CPPSUL) |
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| Registros recuperados : 224 | |
| 6. |  | LIMA, L. M. da S.; WADT, L. H. de O. Fenologia de andirobeira (Carapa guianensis Aubl.) e de castanheira (Bertholletia excelsa HBK) no município de Rio Branco, Acre. In: SEMINÁRIO DE INICIAÇÃO CIENTÍFICA PIBIC/CNPQ/UFAC/EMBRAPA, 15.; MOSTRA DE PESQUISA E PÓS-GRADUAÇÃO, 5., 2006, Rio Branco, AC. Novos rumos, novos caminhos na ciência, tecnologia & inovação: anais. Rio Branco, AC: Ufac, 2006. 2 p. 1 CD-ROM.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Acre. |
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| 8. | | CARVALHO, J. O. M.; UTUMI, M. M.; VIEIRA, J. V.; LIMA, L. M. L.; LOCATELLI, M. Avaliação de genótipos de cenoura na região de cerrado pré-Amazônico. Horticultura Brasileira, Brasília, DF, v. 23, n. 2, ago. 2005. Suplemento 2. CD-ROM. Trabalho apresentado no 45. Congresso Brasileiro de Olericultura, Fortaleza, 2005. Publicado também como resumo em: Horticultura Brasileira, Brasília, DF, v. 23, n. 2, p. 422, ago. 2005. Suplemento 1.| Biblioteca(s): Embrapa Hortaliças. |
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| 12. | | LUCENA, V. S.; SANTOS, R. C. dos; LIMA, L. M. de; MELO FILHO, P. de A. Análise in silico de genes inibidores de tripsina em nove diferentes espécies herbáceas. In: CONGRESSO BRASILEIRO DE MAMONA, 5.; SIMPÓSIO INTERNACIONAL DE OLEAGINOSAS ENERGÉTICAS, 2.; FÓRUM CAPIXABA DE PINHÃO-MANSO, 1., 2012, Guarapari. Desafios e Oportunidades: anais. Campina Grande: Embrapa Algodão, 2012. p. 18| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Algodão. |
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| 15. | | SANTOS, R. C. dos; FREIRE, R. M. M.; LIMA, L. M. de (ed.). O agronegócio do amendoim no Brasil. 2. ed. rev. e ampl. Brasília, DF: Embrapa, 2013. 585 p. il. color. Autores: Alessandra Pereira Fávero, Ana Cristina Miranda Brasileiro, Ana Heloneida de Araújo Morais, Ana Maria Rauen de Olvieira Miguel, Bill Jorge Costa, David John Bertioli, Denizart Bolonhezi, Francisco José Alves Fernandes Távora,...| Tipo: Autoria/Organização/Edição de Livros |
| Biblioteca(s): Embrapa Algodão. |
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| 17. | | LOCATELLI, M.; MELO, A. S.; LIMA, L. M. L. de; VIEIRA, A. H. Deficiências Nutricionais em mudas de Schizolobium parahyba var. amazonicum. In: CONGRESSO NACIONAL DE BOTÂNICA, 57.; ENCONTRO ESTADUAL DE BOTÂNICOS, 13.; ENCONTRO ESTADUAL DE HERBÁRIOS, 5., 2006, Gramado. Resumos... Porto Alegre: Sociedade Botânica do Brasil, 2006. 3 p. 1 CD-ROM.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Rondônia. |
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| 19. | | BATISTA, V. G. L.; PINHEIRO, M. P. N.; SANTOS, R. C. dos; LIMA, L. M. de. Estudo da expressão de genes relacionados ao botão floral do algodoeiro por meio RT-PCR semiquantitativa. In: CONGRESSO BRASILEIRO DE MAMONA, 5.; SIMPÓSIO INTERNACIONAL DE OLEAGINOSAS ENERGÉTICAS, 2.; FÓRUM CAPIXABA DE PINHÃO-MANSO, 1., 2012, Guarapari. Desafios e Oportunidades: anais. Campina Grande: Embrapa Algodão, 2012. p. 35| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Algodão. |
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| 20. | | LIMA, L. M. da S.; WADT, L. H. de O.; MARTINS, K.; KLIMAS, C. Estudo fenológico da andiroba (Carapa guianensis Aublet, Meliaceae), no município de rio Branco, Acre. In: SEMINÁRIO ANUAL DE COOPERAÇÃO UNIVERSIDADE FEDERAL DO ACRE/UNIVERSITY OF FLORIDA, 5., 2007, Rio Branco, AC. Anais... Rio Branco, AC: UFAC: Flórida: University of Florida, 2007. 5 p.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Acre. |
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| Registros recuperados : 224 | |
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