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 | Acesso ao texto completo restrito à biblioteca da Embrapa Mandioca e Fruticultura. Para informações adicionais entre em contato com cnpmf.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Mandioca e Fruticultura. |
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Data corrente: |
22/12/2015 |
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Data da última atualização: |
18/05/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
SILVA, P. R. O.; JESUS, O. N. de; CRESTE, S.; FIGUEIRA, A.; AMORIM, E. P.; FERREIRA, C. F. |
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Afiliação: |
P.R.O. SILVA, UFRB; ONILDO NUNES DE JESUS, CNPMF; S. CRESTE, IAC; A. FIGUEIRA, USP; EDSON PERITO AMORIM, CNPMF; CLAUDIA FORTES FERREIRA, CNPMF. |
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Título: |
Evaluation of microsatellite loci from libraries derived from the wild diploid 'Calcutta 4' and 'Ouro' banana cultivars. |
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Ano de publicação: |
2015 |
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Fonte/Imprenta: |
Genetics and Molecular Research, v.14, n. 3, p. 11410-11428, 2015. |
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ISSN: |
1676-5680 |
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Idioma: |
Inglês |
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Conteúdo: |
Microsatellite markers have been widely used in the quantification of genetic variability and for genetic breeding in Musa spp. The objective of the present study was to evaluate the discriminatory power of microsatellite markers derived from 'Calcutta 4' and 'Ouro' genomic libraries, and to analyze the genetic variability among 30 banana accessions. Thirty-eight markers were used: 15 from the 'Ouro' library and 23 from the 'Calcutta 4' library. Genetic diversity was evaluated by considering SSR markers as both dominant markers because of the presence of triploid accessions, and co-dominant markers. For the dominant analysis, polymorphism information content (PIC) values for 44 polymorphic markers ranged from 0.063 to 0.533, with a mean value of 0.24. A dendrogram analysis separated the BGB-Banana accessions into 4 groups: the 'Ouro' SSR markers from 'Calcutta 4' and 'Ouro' libraries and 'Muísa Tia' accessions were the most dissimilar (93% dissimilarity), while the most similar accessions were 'Pacovan' and 'Walha'. The mean genetic distance between samples was 0.74. For the analysis considering SSR markers as co-dominants, using only diploid accessions, two groups were separated based on their genome contents (A and B). The PIC values for the markers from the 'Calcutta 4' library varied from 0.4836 to 0.7886, whereas those from the 'Ouro' library ranged from 0.3800 to 0.7521. Given the high PIC values, the markers from both the libraries showed high discriminatory power, and can therefore be widely applied for analysis of genetic diversity, population structures, and linkage mapping in Musa spp. MenosMicrosatellite markers have been widely used in the quantification of genetic variability and for genetic breeding in Musa spp. The objective of the present study was to evaluate the discriminatory power of microsatellite markers derived from 'Calcutta 4' and 'Ouro' genomic libraries, and to analyze the genetic variability among 30 banana accessions. Thirty-eight markers were used: 15 from the 'Ouro' library and 23 from the 'Calcutta 4' library. Genetic diversity was evaluated by considering SSR markers as both dominant markers because of the presence of triploid accessions, and co-dominant markers. For the dominant analysis, polymorphism information content (PIC) values for 44 polymorphic markers ranged from 0.063 to 0.533, with a mean value of 0.24. A dendrogram analysis separated the BGB-Banana accessions into 4 groups: the 'Ouro' SSR markers from 'Calcutta 4' and 'Ouro' libraries and 'Muísa Tia' accessions were the most dissimilar (93% dissimilarity), while the most similar accessions were 'Pacovan' and 'Walha'. The mean genetic distance between samples was 0.74. For the analysis considering SSR markers as co-dominants, using only diploid accessions, two groups were separated based on their genome contents (A and B). The PIC values for the markers from the 'Calcutta 4' library varied from 0.4836 to 0.7886, whereas those from the 'Ouro' library ranged from 0.3800 to 0.7521. Given the high PIC values, the markers from both the libraries showed high discriminatory power, an... Mostrar Tudo |
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Thesagro: |
Banana; Variação genética. |
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Thesaurus Nal: |
Genetic variation; Microsatellite repeats; Musa. |
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Categoria do assunto: |
G Melhoramento Genético |
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Marc: |
LEADER 02389naa a2200253 a 4500
001 2032237
005 2023-05-18
008 2015 bl uuuu u00u1 u #d
022 $a1676-5680
100 1 $aSILVA, P. R. O.
245 $aEvaluation of microsatellite loci from libraries derived from the wild diploid 'Calcutta 4' and 'Ouro' banana cultivars.$h[electronic resource]
260 $c2015
520 $aMicrosatellite markers have been widely used in the quantification of genetic variability and for genetic breeding in Musa spp. The objective of the present study was to evaluate the discriminatory power of microsatellite markers derived from 'Calcutta 4' and 'Ouro' genomic libraries, and to analyze the genetic variability among 30 banana accessions. Thirty-eight markers were used: 15 from the 'Ouro' library and 23 from the 'Calcutta 4' library. Genetic diversity was evaluated by considering SSR markers as both dominant markers because of the presence of triploid accessions, and co-dominant markers. For the dominant analysis, polymorphism information content (PIC) values for 44 polymorphic markers ranged from 0.063 to 0.533, with a mean value of 0.24. A dendrogram analysis separated the BGB-Banana accessions into 4 groups: the 'Ouro' SSR markers from 'Calcutta 4' and 'Ouro' libraries and 'Muísa Tia' accessions were the most dissimilar (93% dissimilarity), while the most similar accessions were 'Pacovan' and 'Walha'. The mean genetic distance between samples was 0.74. For the analysis considering SSR markers as co-dominants, using only diploid accessions, two groups were separated based on their genome contents (A and B). The PIC values for the markers from the 'Calcutta 4' library varied from 0.4836 to 0.7886, whereas those from the 'Ouro' library ranged from 0.3800 to 0.7521. Given the high PIC values, the markers from both the libraries showed high discriminatory power, and can therefore be widely applied for analysis of genetic diversity, population structures, and linkage mapping in Musa spp.
650 $aGenetic variation
650 $aMicrosatellite repeats
650 $aMusa
650 $aBanana
650 $aVariação genética
700 1 $aJESUS, O. N. de
700 1 $aCRESTE, S.
700 1 $aFIGUEIRA, A.
700 1 $aAMORIM, E. P.
700 1 $aFERREIRA, C. F.
773 $tGenetics and Molecular Research$gv.14, n. 3, p. 11410-11428, 2015.
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Registro original: |
Embrapa Mandioca e Fruticultura (CNPMF) |
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| 1. |  | DIE, J. V.; ROMAN, B.; SALVADOR, N.; RODRIGUEZ, M. A. D.; GONZÁLEZ-VERDEJO, C. I. Expression analysis of Pisum sativum putative defence genes during Orobanche crenata infection. Crop and Pasture Science, Victoria, v. 60, n. 5, p. 490-498, mai. 2009.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 5 |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 2. | | DIE, J. V.; GONZÁLEZ VERDEJO, C. I.; DITA, M. A.; SALVADOR, N.; ROMAN, B. Gene expression analysis of molecular mechanisms of defense induced in Medicago truncatula parasitized by Orobanche crenata. Plant Physiology and Biochemistry, Paris, v. 47, n. 3, p. 635-641, mar. 2009.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 1 |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 3. | | GONZÁLEZ-VERDEJO, C. I.; DITA, M. A.; NADAL, S.; MORENO, M. T.; ROMÁN, B. Sucrose application suppresses infection of the parasitic plant Orobanche ramosa en tomate (Lycopersicon esculentum). Agrociência, México, v. 42, n. 5, p. 513-517, ago. 2008. Texto em inglês e espanhol.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: Internacional - A |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 4. | | DIE, J. V.; DITA, M. A.; KRAJINSKI, F.; GONZÁLEZ-VERDEJO, C. I.; RUBIALES, D.; MORENO, M. T.; ROMÁN, B. Identification by suppression subtractive hybridization and expression analysis of Medicago truncatula putative defence genes in response to Orobanche crenata parasitization. Physiological and Molecular Plant Pathology, v. 70, p. 49-59, 2007.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: Internacional - A |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 5. | | RISPAIL, N.; DITA, M. A.; GONZÁLEZ-VERDEJO, C.; PÉREZ-DE-LUQUE, A.; CASTILLEJO, M. A.; PRATS, E.; ROMÁN, B.; JORRÍN, J.; RUBIALES, D. Plant resistance to parasitic plants: molecular approaches to an old foe. New Pathologist, Oxford, v. 173, n. 4, p. 703-712, 2007.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: Internacional - A |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| Registros recuperados : 5 | |
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