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Registro Completo |
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Biblioteca(s): |
Embrapa Agrobiologia. |
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Data corrente: |
27/09/2022 |
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Data da última atualização: |
27/09/2022 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
FERREIRA, N. dos S.; GONIGLIO, A.; PUENTE, M.; SANTANNA, F. H.; MARONICHE, G.; GARCIA, J.; MOLINA, R.; NIEVAS, S.; VOLPIANO, C. G.; AMBROSINI, A.; PASSAGLIA, L. M. P.; PEDRAZA, R. O.; REIS, V. M.; ZILLI, J. E.; CASSAN, F. |
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Afiliação: |
NATÁLIA DOS SANTOS FERREIRA, UFRRJ; ANAHÍ CONIGLIO, Universidad Nacional de Río Cuarto; MARIANA PUENTE, INTA; FERNANDO HAYASHI SANT'ANNA, PROAD-SUS; GUILLERMO MARONICHE, Universidad Nacional de Mar del Plata; JULIA GARCÍA, INTA; ROMINA MOLINA, UNIVERSIDAD NACIONAL DE RIO CUARTO; SOFIA NIEVAS, UNIVERSIDAD NACIONAL DE RIO CUARTO; CAMILA GAZOLLA VOLPIANO, UFGRS; ADRIANA AMBROSINI, UFRGS; LUCIANE M P PASSAGLIA, UFRGS; RAUL O. PEDRAZA, Universidad Nacional de Tucumán; VERONICA MASSENA REIS, CNPAB; JERRI EDSON ZILLI, CNPAB; FABRICIO CASSAN, Universidad Nacional de Río Cuarto. |
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Título: |
Genome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov. |
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Ano de publicação: |
2022 |
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Fonte/Imprenta: |
International Journal of Systematic and Evolutionary Microbiology, v. 72, n. 8, aug. 2022. |
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ISSN: |
1466-5034 |
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DOI: |
0.1099/ijsem.0.005475 |
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Idioma: |
Inglês |
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Conteúdo: |
Strain Az39T of Azospirillum is a diazotrophic plant growth-promoting bacterium isolated in 1982 from the roots of wheat plants growing in Marcos Juárez, Córdoba, Argentina. It produces indole-3-acetic acid in the presence of l-tryptophan as a precursor, grows at 20-38 °C (optimal 38 °C), and the cells are curved or spiral-shaped, with diameters ranging from 0.5-0.9 to 1.8-2.2 µm. They contain C16 : 0, C18 : 0 and C18 : 1 ω7c/ω6c as the main fatty acids. Phylogenetic analysis of its 16S rRNA gene sequence confirmed that this strain belongs to the genus Azospirillum, showing a close relationship with Azospirillum baldaniorum Sp245T, Azospirillum brasilense Sp7T and Azospirillum formosense CC-Nfb-7T. Housekeeping gene analysis revealed that Az39T, together with five strains of the genus (Az19, REC3, BR 11975, MTCC4035 and MTCC4036), form a cluster apart from A. baldaniorum Sp245T, A. brasilense Sp7T and A. formosense CC-Nfb-7T. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) between Az39T and the aforementioned type strains revealed values below 96 %, the circumscription limit for the species delineation (ANI: 95.3, 94.1 and 94.0 %; dDDH: 62.9, 56.3 and 55.6 %). Furthermore, a phylogeny evaluation of the core proteome, including 809 common shared proteins, showed an independent grouping of Az39T, Az19, REC3, BR 11975, MTCC4035 and MTCC4036. The G+C content in the genomic DNA of these six strains varied from 68.3 to 68.5 %. Based on the combined phylogenetic, genomic and phenotypic characterization presented here, we consider that strain Az39T, along with strains Az19, REC3, BR 11975, MTCC4035 and MTCC4036, are members of a new Azospirillum species, for which the name Azospirillum argentinense sp. nov. is proposed. The type strain is Az39T (=LBPCV39T=BR 148428T=CCCT 22.01T). MenosStrain Az39T of Azospirillum is a diazotrophic plant growth-promoting bacterium isolated in 1982 from the roots of wheat plants growing in Marcos Juárez, Córdoba, Argentina. It produces indole-3-acetic acid in the presence of l-tryptophan as a precursor, grows at 20-38 °C (optimal 38 °C), and the cells are curved or spiral-shaped, with diameters ranging from 0.5-0.9 to 1.8-2.2 µm. They contain C16 : 0, C18 : 0 and C18 : 1 ω7c/ω6c as the main fatty acids. Phylogenetic analysis of its 16S rRNA gene sequence confirmed that this strain belongs to the genus Azospirillum, showing a close relationship with Azospirillum baldaniorum Sp245T, Azospirillum brasilense Sp7T and Azospirillum formosense CC-Nfb-7T. Housekeeping gene analysis revealed that Az39T, together with five strains of the genus (Az19, REC3, BR 11975, MTCC4035 and MTCC4036), form a cluster apart from A. baldaniorum Sp245T, A. brasilense Sp7T and A. formosense CC-Nfb-7T. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) between Az39T and the aforementioned type strains revealed values below 96 %, the circumscription limit for the species delineation (ANI: 95.3, 94.1 and 94.0 %; dDDH: 62.9, 56.3 and 55.6 %). Furthermore, a phylogeny evaluation of the core proteome, including 809 common shared proteins, showed an independent grouping of Az39T, Az19, REC3, BR 11975, MTCC4035 and MTCC4036. The G+C content in the genomic DNA of these six strains varied from 68.3 to 68.5 %. Based on the comb... Mostrar Tudo |
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Palavras-Chave: |
Proteome core. |
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Thesaurus Nal: |
Azospirillum; Phylogeny. |
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Categoria do assunto: |
S Ciências Biológicas |
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Marc: |
LEADER 02871naa a2200349 a 4500
001 2146886
005 2022-09-27
008 2022 bl uuuu u00u1 u #d
022 $a1466-5034
024 7 $a0.1099/ijsem.0.005475$2DOI
100 1 $aFERREIRA, N. dos S.
245 $aGenome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov.$h[electronic resource]
260 $c2022
520 $aStrain Az39T of Azospirillum is a diazotrophic plant growth-promoting bacterium isolated in 1982 from the roots of wheat plants growing in Marcos Juárez, Córdoba, Argentina. It produces indole-3-acetic acid in the presence of l-tryptophan as a precursor, grows at 20-38 °C (optimal 38 °C), and the cells are curved or spiral-shaped, with diameters ranging from 0.5-0.9 to 1.8-2.2 µm. They contain C16 : 0, C18 : 0 and C18 : 1 ω7c/ω6c as the main fatty acids. Phylogenetic analysis of its 16S rRNA gene sequence confirmed that this strain belongs to the genus Azospirillum, showing a close relationship with Azospirillum baldaniorum Sp245T, Azospirillum brasilense Sp7T and Azospirillum formosense CC-Nfb-7T. Housekeeping gene analysis revealed that Az39T, together with five strains of the genus (Az19, REC3, BR 11975, MTCC4035 and MTCC4036), form a cluster apart from A. baldaniorum Sp245T, A. brasilense Sp7T and A. formosense CC-Nfb-7T. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) between Az39T and the aforementioned type strains revealed values below 96 %, the circumscription limit for the species delineation (ANI: 95.3, 94.1 and 94.0 %; dDDH: 62.9, 56.3 and 55.6 %). Furthermore, a phylogeny evaluation of the core proteome, including 809 common shared proteins, showed an independent grouping of Az39T, Az19, REC3, BR 11975, MTCC4035 and MTCC4036. The G+C content in the genomic DNA of these six strains varied from 68.3 to 68.5 %. Based on the combined phylogenetic, genomic and phenotypic characterization presented here, we consider that strain Az39T, along with strains Az19, REC3, BR 11975, MTCC4035 and MTCC4036, are members of a new Azospirillum species, for which the name Azospirillum argentinense sp. nov. is proposed. The type strain is Az39T (=LBPCV39T=BR 148428T=CCCT 22.01T).
650 $aAzospirillum
650 $aPhylogeny
653 $aProteome core
700 1 $aGONIGLIO, A.
700 1 $aPUENTE, M.
700 1 $aSANTANNA, F. H.
700 1 $aMARONICHE, G.
700 1 $aGARCIA, J.
700 1 $aMOLINA, R.
700 1 $aNIEVAS, S.
700 1 $aVOLPIANO, C. G.
700 1 $aAMBROSINI, A.
700 1 $aPASSAGLIA, L. M. P.
700 1 $aPEDRAZA, R. O.
700 1 $aREIS, V. M.
700 1 $aZILLI, J. E.
700 1 $aCASSAN, F.
773 $tInternational Journal of Systematic and Evolutionary Microbiology$gv. 72, n. 8, aug. 2022.
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Embrapa Agrobiologia (CNPAB) |
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| Registros recuperados : 11 | |
| 6. |  | TOMAS, W. M.; CHIARAVALOTTI, R. M.; CAMILO, A. R.; FREITAS, G. O. de. Kinosternon scorpioides scorpioides Linnaeus, 1766: range extension and first records in the upper Paraguay River basin and Mato Grosso do Sul, Brazil. Check List, v. 11, n. 3, april, 2015.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 3 |
| Biblioteca(s): Embrapa Pantanal. |
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| 8. | | NUNES, A. P.; POSSO, S. R.; FROTA, A. V. B da; VITORINO, B. D; LAPS, R. R.; DONATELLI, R. J.; STRAUBE, F. C.; PIVATTO, M. A. C.; OLIVEIRA, D. M. M. de; CARLOS, B.; MELO, A. V. de; TOMAS, W. M.; FREITAS, G. O. de; SOUZA, R, A. D. de; BENITES, M.; MAMEDE, S.; MOREIRA, R. S. Birds of the Pantanal floodplains, Brazil: historical data, diversity, and conservation. Papéis Avulsos de Zoologia, v.61, e20216182, 2021.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 1 |
| Biblioteca(s): Embrapa Pantanal. |
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| 9. | | NUNES, A. P.; STRAUBE, F. C.; POSSO, S. R.; LAPS, R. R.; VASCONCELOS, M. F. de; HOFFMANN, D.; MORANTE FILHO, J. C.; DONATELLI, R. J.; RAGUSA NETTO, J.; FAXINA, C.; GODOI, M. N.; URBEN FILHO, A.; CASTRO, S. L. R. de; LOPES, E. V.; ANJOS, L. dos; TOMAS, W. M.; MENDONÇA, L. B.; SILVA, P. A.; PIVATTO, M. A. de C.; COSTACURTA, M. de B.; MELO, A. V.; HASS, A.; BRAZ, V. da S.; MÓDENA, E. de S.; FREITAS, G. O. de; SOUZA, R. A. D. de; BENITES, M.; MAMEDE, S.; MENQ, W. Checklist of the birds of Mato Grosso do Sul state, Brazil: diversity and conservation. Papéis Avulsos de Zoologia, v. 62, e202262029, 2022.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 1 |
| Biblioteca(s): Embrapa Pantanal. |
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| 10. | | TOMAS, W. M.; BERLINCK, C. N.; CHIARAVALLOTI, R. M.; FAGGIONI, G. P.; STRÜSSMANN, C.; LIBONATI, R.; ABRAHÃO, C. R.; ALVARENGA, G. do V.; BACELLAR, A. E. de F.; BATISTA, F. R. de Q.; BORNATO, T. S.; CAMILO, A. R.; CASTEDO, J.; FERNANDO, A. M. E.; FREITAS, G. O. de; GARCIA, C. M.; GONÇALVES, H. S.; GUILHERME, M. B. de F.; LAYME, V. M. G.; LUSTOSA, A. P. G.; OLIVEIRA, A. C. de; OLIVEIRA, M. da R.; PEREIRA, A. de M. M.; RODRIGUES, J. A.; SEMEDO, T. B. F.; SOUZA, R. A. D. de; TORTATO, F. R.; VIANA, D. F. P.; VICENTE - SILVA, L.; MORATO, R. Distance sampling surveys reveal 17 million vertebrates directly killed by the 2020's wildfires in the Pantanal, Brazil. Scientific Reports, v. 11, 23547, 2021.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pantanal. |
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| 11. | | TOMAS, W. M.; ROQUE, F. de O.; MORATO, R. G.; MÉDICI, P. E.; CHIARAVALLOTI, R. M.; TORTATO, F. R.; PENHA, J. M. F.; IZZO, T. J.; GARCIA, L. C.; LOURIVAL, R. F. F.; GIRARD, P.; ALBUQUERQUE, N. R.; ALMEIDA-GOMES, M.; ANDRADE, M. H. DA S.; ARAÚJO, F. A. S.; ARAÚJO, A. C.; ARRUDA, E. C. DE.; ASSUNÇÃO, V. A.; BATTIROLA, L. D.; BENITES, M.; BOLZAN, F. P.; BOOCK, J. C.; BORTOLOTTO, I. M.; BRASIL, M. DA S.; CAMILO, A. R.; CAMPOS, Z.; CARNIELLO, M. A.; CATELLA, A. C.; CHEIDA, C. C.; CRAWSHAW JR. P. G.; CRISPIM, S. M. A.; DAMASCENO JUNIOR, G. A.; DESBIEZ, A. L. J.; DIAS, F. A.; EATON, D. P.; FAGGIONI, G. P.; FARINACCIO, M. A.; FERNANDES, J. F. A.; FERREIRA, V. L.; FISCHER, E. A.; FRAGOSO, C. E.; FREITAS, G. O.; GALVANI, F.; GARCIA, A. S.; GARCIA, C. M.; GRACIOLLI, G.; GUARIENTO, R. D.; GUEDES, N. M. R.; GUERRA, A.; HERRERA, H. M.; HOOGESTEIJN, R.; IKEDA, S. C.; JULIANO, R. S.; KANTEK, D. L. Z. K.; KEUROGHLIAN, A.; LACERDA, A. C. R.; LACERDA, A. L. R.; LANDEIRO, V. L.; LAPS, R. R.; LAYME, V.; LEIMGRUBER, P.; ROCHA, F. L.; MAMEDE, S.; MARQUES, D. K. S.; MARQUES, M. I.; MATEUS, L. A. F.; MORAES R. N.; MOREIRA, T. A.; MOURAO, G.; NICOLA, R. D.; NOGUEIRA, D. G.; NUNES, A. P.; CUNHA, C. N. DA.; OLIVEIRA, M. D. de; OLIVEIRA, M. R.; PAGGI, G. M.; PELLEGRIN, A. O.; PEREIRA, G. M. F.; PERES, I. A. H. F. S.; PINHO, J. B.; POTT, A.; PROVETE, D. B.; REIS, V. D. A. dos; REIS, L. K. DOS; RENAUD, P. C.; RIBEIRO, D. B.; ROSSETTO, O. C.; SABINO, J.; RUMIZ, D.; SALIS, S. M.; SANTANA, D. J.; SANTOS, S. A.; SARTORI, Â. L.; SATO, M.; SCHUCHMANN, K-L.; SCREMIN-DIAS, E.; SEIXAS, G. H. F.; SEVERO-NETO, F.; SIGRIST, M. R.; SILVA, A.; SILVA, C. J.; SIQUEIRA, A. L.; SORIANO, B. M. A.; SOUSA, L. M.; SOUZA, F. L.; STRUSSMANN, C.; SUGAI, L. S. M.; TOCANTINS, N.; URBANETZ, C.; VALENTE-NETO, F.; VIANA, D. P.; YANOSKY, A.; JUNK, W. J. Sustainability Agenda for the Pantanal Wetland: Perspectives on a Collaborative Interface for Science, Policy, and Decision-Making. Tropical Conservation Science, v. 12, p. 1-30, 2019.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Pantanal. |
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| Registros recuperados : 11 | |
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