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 | Acesso ao texto completo restrito à biblioteca da Embrapa Amazônia Ocidental. Para informações adicionais entre em contato com cpaa.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Amazônia Ocidental. |
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Data corrente: |
07/02/2024 |
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Data da última atualização: |
07/02/2024 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
ZUFFA, S.; SCHMID, R.; BAUERMEISTER, A.; GOMES, P. W. P.; CARABALLO-RODRIGUEZ, A. M.; EL ABIEAD, Y.; ARON, A. T.; GENTRY, E. C.; ZEMLIN, J.; MEEHAN, M. J.; AVALON, N. E.; CICHEWICZ, R. H.; BUZUN, E.; CARRILLO TERRAZAS, M.; HSU, C. Y.; OLES, R.; AYALA, A. V.; ZHAO, J.; CHU, H.; KUIJPERS, M. C. M.; JACKREL, S. L.; TUGIZIMANA, F.; NEPHALI, L. P.; DUBERY, I. A.; MADALA, N. E.; MOREIRA, E. A.; COSTA-LOTUFO, L. V.; LOPES, N. P.; REZENDE-TEIXEIRA, P.; JIMENEZ, P. C.; RIMAL, B.; PATTERSON, A. D.; TRAXLER, M. F.; PESSOTTI, R. de C.; ALVARADO-VILLALOBOS, D.; TAMAYO-CASTILLO, G.; CHAVERRI, P.; ESCUDERO-LEYVA, E.; QUIROS-GUERRERO, L. M.; BORY, A. J.; JOUBERT, J.; RUTZ, A.; WOLFENDER, J. L.; ALLARD, P. M.; SICHERT, A.; PONTRELLI, S.; PULLMAN, B. S.; BANDEIRA, N.; GERWICK, W. H.; GINDRO, K.; MASSANA-CODINA, J.; WAGNER, B. C.; FORCHHAMMER, K.; PETRAS, D.; AIOSA, N.; GARG, N.; LIEBEKE, M.; BOURCEAU, P.; KANG, K. B.; GADHAVI, H.; CARVALHO, L. P. S. de; SANTOS, M. S. dos; PÉREZ-LORENTE, A. I.; MOLINA-SANTIAGO, C.; ROMERO, D.; FRANKE, R.; BRÖNSTRUP, M.; PONCE DE LEÓN, A. V.; POPE, P. B.; LA ROSA, S. L.; LA BARBERA, G.; ROAGER, H. M.; LAURSEN, M. F.; HAMMERLE, F.; SIEWERT, B.; PEINTNER, U.; LICONA-CASSANI, C.; RODRIGUEZ-ORDUÑA, L.; RAMPLER, E.; HILDEBRAND, F.; KOELLENSPERGER, G.; SCHOENY, H.; HOHENWALLNER, K.; PANZENBOECK, L.; GREGOR, R.; O'NEILL, E. C.; ROXBOROUGH, E. T.; ODOI, J.; BALE, N. J.; DING, S.; DAMSTÉ, J. S. S.; GUAN, X. L.; CUI, J. J.; JU, K. S.; SILVA, D. B.; SILVA, F. M. R.; SILVA, G. F. da; KOOLEN, H. H. F.; GRUNDMANN, C.; CLEMENT, J. A.; MOHIMANI, H.; BRODERS, K.; McPHAIL, K. L.; OBER-SINGLETON, S. E.; RATH, C. M.; McDONALD, D.; KNIGHT, R.; WANG, M.; DORRESTEIN, P. C. |
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Afiliação: |
SIMONE ZUFFA, UNIVERSITY OF CALIFORNIA SAN DIEGO; ROBIN SCHMID, UNIVERSITY OF CALIFORNIA SAN DIEGO; ANELIZE BAUERMEISTER, UNIVERSITY OF CALIFORNIA SAN DIEGO; PAULO WENDER P. GOMES, UNIVERSITY OF CALIFORNIA SAN DIEGO; ANDRES M. CARABALLO-RODRIGUEZ, UNIVERSITY OF CALIFORNIA SAN DIEGO; YASIN EL ABIEAD, UNIVERSITY OF CALIFORNIA SAN DIEGO; ALLEGRA T. ARON, UNIVERSITY OF DENVER; EMILY C. GENTRY, DEPARTMENT OF CHEMISTRY, VIRGINIA TECH; JASMINE ZEMLIN, UNIVERSITY OF CALIFORNIA SAN DIEGO; MICHAEL J. MEEHAN, UNIVERSITY OF CALIFORNIA SAN DIEGO; NICOLE E. AVALON, UNIVERSITY OF CALIFORNIA SAN DIEGO; ROBERT H. CICHEWICZ, UNIVERSITY OF OKLAHOMA; EKATERINA BUZUN, UNIVERSITY OF CALIFORNIA SAN DIEGO; MARVIC CARRILLO TERRAZAS, UNIVERSITY OF CALIFORNIA SAN DIEGO; CHIA-YUN HSU, UNIVERSITY OF CALIFORNIA SAN DIEGO; RENEE OLES, UNIVERSITY OF CALIFORNIA SAN DIEGO; ADRIANA VASQUEZ AYALA, UNIVERSITY OF CALIFORNIA SAN DIEGO; JIAQI ZHAO, UNIVERSITY OF CALIFORNIA SAN DIEGO; HIUTUNG CHU, UNIVERSITY OF CALIFORNIA SAN DIEGO; MIRTE C. M. KUIJPERS, UNIVERSITY OF CALIFORNIA SAN DIEGO; SARA L. JACKREL, UNIVERSITY OF CALIFORNIA SAN DIEGO; FIDELE TUGIZIMANA, UNIVERSITY OF JOHANNESBURG; LERATO PERTUNIA NEPHALI, UNIVERSITY OF JOHANNESBURG; IAN A. DUBERY, UNIVERSITY OF JOHANNESBURG; NTAKADZENI EDWIN MADALA, UNIVERSITY OF VENDA; EDUARDA ANTUNES MOREIRA, UNIVERSIDADE DE SÃO PAULO; LETICIA VERAS COSTA-LOTUFO, UNIVERSIDADE DE SÃO PAULO; NORBERTO PEPORINE LOPES, UNIVERSIDADE DE SÃO PAULO; PAULA REZENDE-TEIXEIRA, UNIVERSIDADE DE SÃO PAULO; PAULA C. JIMENEZ, UNIVERSIDADE DE SÃO PAULO; BIPIN RIMAL, PENNSYLVANIA STATE UNIVERSITY; ANDREW D. PATTERSON, PENNSYLVANIA STATE UNIVERSITY; MATTHEW F. TRAXLER, UNIVERSITY OF CALIFORNIA BERKELEY; RITA DE CASSIA PESSOTTI, UNIVERSITY OF CALIFORNIA BERKELEY; DANIEL ALVARADO-VILLALOBOS, UNIVERSIDAD DE COSTA RICA; GISELLE TAMAYO-CASTILLO, UNIVERSIDAD DE COSTA RICA; PRISCILA CHAVERRI, UNIVERSIDAD DE COSTA RICA; EFRAIN ESCUDERO-LEYVA, UNIVERSIDAD DE COSTA RICA; LUIS-MANUEL QUIROS-GUERRERO, UNIVERSITY OF GENEVA; ALEXANDRE JEAN BORY, UNIVERSITY OF GENEVA; JULIETTE JOUBERT, UNIVERSITY OF GENEVA; ADRIANO RUTZ, UNIVERSITY OF GENEVA; JEAN-LUC WOLFENDER, UNIVERSITY OF GENEVA; PIERRE-MARIE ALLARD, UNIVERSITY OF GENEVA; ANDREAS SICHERT, INSTITUTE OF MOLECULAR SYSTEMS BIOLOGY; SAMMY PONTRELLI, INSTITUTE OF MOLECULAR SYSTEMS BIOLOGY; BENJAMIN S. PULLMAN, UNIVERSITY OF CALIFORNIA SAN DIEGO; NUNO BANDEIRA, UNIVERSITY OF CALIFORNIA SAN DIEGO; WILLIAM H. GERWICK, UNIVERSITY OF CALIFORNIA SAN DIEGO; KATIA GINDRO, PLANT PROTECTION, MYCOLOGY GROUP; JOSEP MASSANA-CODINA, PLANT PROTECTION, MYCOLOGY GROUP; BERENIKE C. WAGNER, UNIVERSITY OF TUEBINGEN; KARL FORCHHAMMER, UNIVERSITY OF TUEBINGEN; DANIEL PETRAS, UNIVERSITY OF TUEBINGEN; NICOLE AIOSA, GEORGIA INSTITUTE OF TECHNOLOGY; NEHA GARG, GEORGIA INSTITUTE OF TECHNOLOGY; MANUEL LIEBEKE, MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY; PATRIC BOURCEAU, MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY; KYO BIN KANG, SOOKMYUNG WOMEN’S UNIVERSITY; HENNA GADHAVI, THE FRANCIS CRICK INSTITUTE; LUIZ PEDRO SORIO DE CARVALHO, THE FRANCIS CRICK INSTITUTE; MARIANA SILVA DOS SANTOS, THE FRANCIS CRICK INSTITUTE; ALICIA ISABEL PÉREZ-LORENTE, UNIVERSIDAD DE MÁLAGA-CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS; CARLOS MOLINA-SANTIAGO, UNIVERSIDAD DE MÁLAGA-CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS; DIEGO ROMERO, UNIVERSIDAD DE MÁLAGA-CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS; RAIMO FRANKE, HELMHOLTZ CENTRE FOR INFECTION RESEARCH; MARK BRÖNSTRUP, HELMHOLTZ CENTRE FOR INFECTION RESEARCH; ARTURO VERA PONCE DE LEÓN, NORWEGIAN UNIVERSITY OF LIFE SCIENCES; PHILLIP BYRON POPE, NORWEGIAN UNIVERSITY OF LIFE SCIENCES; SABINA LEANTI LA ROSA, NORWEGIAN UNIVERSITY OF LIFE SCIENCES; GIORGIA LA BARBERA, UNIVERSITY OF COPENHAGEN; HENRIK M. ROAGER, UNIVERSITY OF COPENHAGEN; MARTIN FREDERIK LAURSEN, UNIVERSITY OF DENMARK; FABIAN HAMMERLE, UNIVERSITY OF INNSBRUCK; BIANKA SIEWERT, UNIVERSITY OF INNSBRUCK; URSULA PEINTNER, UNIVERSITY OF INNSBRUCK; CUAUHTEMOC LICONA-CASSANI, CENTRO DE BIOTECNOLOGÍA FEMSA, TECNOLOGICO DE MONTERREY; LORENA RODRIGUEZ-ORDUÑA, CENTRO DE BIOTECNOLOGÍA FEMSA, TECNOLOGICO DE MONTERREY; EVELYN RAMPLER, UNIVERSITY OF VIENNA; FELINA HILDEBRAND, UNIVERSITY OF VIENNA; GUNDA KOELLENSPERGER, UNIVERSITY OF VIENNA; HARALD SCHOENY, UNIVERSITY OF VIENNA; KATHARINA HOHENWALLNER, UNIVERSITY OF VIENNA; LISA PANZENBOECK, UNIVERSITY OF VIENNA; RACHEL GREGOR, MASSACHUSETTS INSTITUTE OF TECHNOLOGY; ELLIS CHARLES O'NEILL, UNIVERSITY OF NOTTINGHAM; EVE TALLULAH ROXBOROUGH, UNIVERSITY OF NOTTINGHAM; JANE ODOI, UNIVERSITY OF NOTTINGHAM; NICOLE J. BALE, NETHERLANDS INSTITUTE FOR SEA RESEARCH; SU DING, NETHERLANDS INSTITUTE FOR SEA RESEARCH; JAAP S. SINNINGHE DAMSTÉ, NETHERLANDS INSTITUTE FOR SEA RESEARCH; XUE LI GUAN, NANYANG TECHNOLOGICAL UNIVERSITY; JERRY J. CUI, THE OHIO STATE UNIVERSITY; KOU-SAN JU, THE OHIO STATE UNIVERSITY; DENISE BRENTAN SILVA, UNIVERSIDADE DO MATO GROSSO DO SUL; FERNANDA MOTTA RIBEIRO SILVA, UNIVERSIDADE DO MATO GROSSO DO SUL; GILVAN FERREIRA DA SILVA, CPAA; HECTOR H. F. KOOLEN, UNIVERSIDADE DO ESTADO DO AMAZONAS; CARLISMARI GRUNDMANN, UNIVERSIDADE DE SÃO PAULO; JASON A. CLEMENT, BARUCH S. BLUMBERG INSTITUTE; HOSEIN MOHIMANI, CARNEGIE MELLON UNIVERSITY; KIRK BRODERS, OREGON STATE UNIVERSITY; KERRY L. MCPHAIL, OREGON STATE UNIVERSITY; SIDNEE E. OBER-SINGLETON, UNIVERSITY OF OREGON; CHRISTOPHER M. RATH, UNIVERSITY OF CALIFORNIA SAN DIEGO; DANIEL MCDONALD, UNIVERSITY OF CALIFORNIA SAN DIEGO; ROB KNIGHT, UNIVERSITY OF CALIFORNIA SAN DIEGO; MINGXUN WANG, UNIVERSITY OF CALIFORNIA RIVERSIDE; PIETER C. DORRESTEIN, UNIVERSITY OF CALIFORNIA SAN DIEGO. |
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Título: |
MicrobeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data. |
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Ano de publicação: |
2024 |
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Fonte/Imprenta: |
Nature Microbiology, v. 9, p. 336-345, Feb. 2024. |
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DOI: |
https://doi.org/10.1038/s41564-023-01575-9 |
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Idioma: |
Inglês |
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Conteúdo: |
microbeMASST, a taxonomically informed mass spectrometry (MS) search tool, tackles limited microbial metabolite annotation in untargeted metabolomics experiments. Leveraging a curated database of >60,000 microbial monocultures, users can search known and unknown MS/MS spectra and link them to their respective microbial producers via MS/MS fragmentation patterns. Identifcation of microbe-derived metabolites and relative producers without a priori knowledge will vastly enhance the understanding of microorganisms' role in ecology and human health. |
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Palavras-Chave: |
Banco de dados; Ferramenta de pesquisa; Microbial. |
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Thesagro: |
Espectrometria. |
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Thesaurus Nal: |
Microorganisms. |
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Categoria do assunto: |
-- |
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Marc: |
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100 1 $aZUFFA, S.
245 $aMicrobeMASST$ba taxonomically informed mass spectrometry search tool for microbial metabolomics data.$h[electronic resource]
260 $c2024
520 $amicrobeMASST, a taxonomically informed mass spectrometry (MS) search tool, tackles limited microbial metabolite annotation in untargeted metabolomics experiments. Leveraging a curated database of >60,000 microbial monocultures, users can search known and unknown MS/MS spectra and link them to their respective microbial producers via MS/MS fragmentation patterns. Identifcation of microbe-derived metabolites and relative producers without a priori knowledge will vastly enhance the understanding of microorganisms' role in ecology and human health.
650 $aMicroorganisms
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700 1 $aHSU, C. Y.
700 1 $aOLES, R.
700 1 $aAYALA, A. V.
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700 1 $aCHU, H.
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700 1 $aTUGIZIMANA, F.
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700 1 $aDUBERY, I. A.
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700 1 $aPÉREZ-LORENTE, A. I.
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700 1 $aLA ROSA, S. L.
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700 1 $aLAURSEN, M. F.
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700 1 $aSCHOENY, H.
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700 1 $aPANZENBOECK, L.
700 1 $aGREGOR, R.
700 1 $aO'NEILL, E. C.
700 1 $aROXBOROUGH, E. T.
700 1 $aODOI, J.
700 1 $aBALE, N. J.
700 1 $aDING, S.
700 1 $aDAMSTÉ, J. S. S.
700 1 $aGUAN, X. L.
700 1 $aCUI, J. J.
700 1 $aJU, K. S.
700 1 $aSILVA, D. B.
700 1 $aSILVA, F. M. R.
700 1 $aSILVA, G. F. da
700 1 $aKOOLEN, H. H. F.
700 1 $aGRUNDMANN, C.
700 1 $aCLEMENT, J. A.
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700 1 $aMcDONALD, D.
700 1 $aKNIGHT, R.
700 1 $aWANG, M.
700 1 $aDORRESTEIN, P. C.
773 $tNature Microbiology$gv. 9, p. 336-345, Feb. 2024.
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Registro original: |
Embrapa Amazônia Ocidental (CPAA) |
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| Registros recuperados : 2 | |
| 1. |  | LIU, Y.; BRUIJN, I.; JACK, A. L. H.; DRYNAN, K.; BERG, A. H. van den; THOEN, E.; SANDOVAL-SIERRA, V.; SKAAR, I.; WEST, P. van; DIÉGUEZ-URIBEONDO, J.; VOORT, M. van der; MENDES, R.; MAZOLLA, M.; RAAIJMAKERS, J. M. Deciphering microbial landscapes of fish eggs to mitigate emerging diseases. The ISME Journal, London, v. 8, p. 2002?2014, 2014.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 2. | | GEISER, D. M.; AL-HATMI, A. M. S.; AOKI, T.; ARIE, T.; BALMAS, V.; BARNES, I.; BERGSTROM, G. C.; BHATTACHARYYA, M. K.; BLOMQUIST, C. L.; BOWDEN, R. L.; BRANKOVICS, B.; BROWN, D. W.; BURGESS, L. W.; BUSHLEY, K.; BUSMAN, M.; CANO-LIRA, J. F.; CARRILLO, J. D.; CHANG, H. X.; CHEN, C. Y.; CHEN, W.; CHILVERS, M.; CHULZE, S.; COLEMAN, J. J.; CUOMO, C. A.; BEER, Z. W. de; HOOG, G. S. de; CASTILLO-MÚNERA, J. del; PONTE, E. M. del; DIÉGUEZ-URIBEONDO, J.; PIETRO, A. di; EDEL-HERMANN, V.; ELMER, W. H.; EPSTEIN, L.; ESKALEN, A.; ESPOSTO, M. C.; EVERTS, K. L.; FERNÁNDEZ-PAVÍA, S. P.; SILVA, G. F. da; FOROUD, N. A.; FOURIE, G.; FRANDSEN, R. J. N.; FREEMAN, S.; FREITAG, M.; FRENKEL, O.; FULLER, K. K.; GAGKAEVA, T.; GARDINER, D. M.; GLENN, A. E.; GOLD, S. E.; GORDON, T. R.; GREGORY, N. F.; GRYZENHOUT, M.; GUARRO, J.; GUGINO, B. K.; GUTIERREZ, S.; HAMMOND-KOSACK, K. E.; HARRIS, L. J.; HOMA, M.; HONG, C. F.; HORNOK, L.; HUANG, J. W.; ILKIT, M.; JACOBS, A.; JIANG, C.; JIMÉNEZ-GASCO, M. del M.; KANG, S.; KASSON, M. T.; KAZAN, K.; KENNELL, J. C.; KIM, H. S.; KISTLER, H. C.; KULDAU, G. A.; KULIK, T.; KURZAI, O.; LARABA, I.; LAURENCE, M. H.; LEE, T.; LEE, Y. W.; LESLIE, J. F.; LIEW, E. C. Y.; LOFTON, L. W.; LOGRIECO, A. F.; LÓPEZ-BERGES, M. S.; LUQUE, A. G.; LYSØE, E.; MA, L. J.; MARRA, R. E.; MARTIN, F. N.; MAY, S. R.; McCORMICK, S. P.; McGEE, C.; MEIS, J. F.; MIGHELI, Q.; NOR, N. M. I. M.; MONOD, M.; MORETTI, A.; MOSTERT, D.; MULÈ, G.; MUNAUT, F.; MUNKVOLD, G. P.; NICHOLSON, P.; NUCCI, M.; O'DONNELL, K.; PASQUALI, M.; PFENNING, L. H.; PRIGITANO, A.; PROCTOR, R. H.; RANQUE, S.; REHNER, S. A.; REP, M.; RODRÍGUEZ-ALVARADO, G.; ROSE, L. J.; ROTH, M. G.; RUIZ-ROLDÁN, C.; SALEH, A. A.; SALLEH, B.; SANG, H.; SCANDIANI, M. M.; SCAUFLAIRE, J.; SCHMALE III, D. G.; SHORT, D. P. G.; SISIC, A.; SMITH, J. A.; SMYTH, C. W.; SON, H.; SPAHR, E.; STAJICH, J. E.; STEENKAMP, E.; STEINBERG, C.; SUBRAMANIAM, R.; SUGA, H.; SUMMERELL, B. A.; SUSCA, A.; SWETT, C. L.; TOOMAJIAN, C.; TORRES-CRUZ, T. J.; TORTORANO, A. M.; URBAN, M.; VAILLANCOURT, L. J.; VALLAD, G. E.; LEE, T. A. J. van der; VANDERPOOL, D.; DIEPENINGEN, A. D. van; VAUGHAN, M. M.; VENTER, E.; VERMEULEN, M.; VERWEIJ, P. E.; VILJOEN, A.; WAALWIJK, C.; WALLACE, E. C.; WALTHER, G.; WANG, J.; WARD, T. J.; WICKES, B. L.; WIEDERHOLD, N. P.; WINGFIELD, M. J.; WOOD, A. K. M.; XU, J. R.; YANG, X. B.; YLI-MATTILA, T.; YUN, S. H.; ZAKARIA, L.; ZHANG, H.; ZHANG, N.; ZHAN, S. X.; ZHAN, X. Phylogenomic analysis of a 55.1 kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani Species Complex. Phytopathology, v. 111, n. 7, p. 1064-1079, 2021.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Amazônia Ocidental. |
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| Registros recuperados : 2 | |
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