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Registro Completo |
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Biblioteca(s): |
Embrapa Agrobiologia. |
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Data corrente: |
27/09/2022 |
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Data da última atualização: |
27/09/2022 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
FERREIRA, N. dos S.; GONIGLIO, A.; PUENTE, M.; SANTANNA, F. H.; MARONICHE, G.; GARCIA, J.; MOLINA, R.; NIEVAS, S.; VOLPIANO, C. G.; AMBROSINI, A.; PASSAGLIA, L. M. P.; PEDRAZA, R. O.; REIS, V. M.; ZILLI, J. E.; CASSAN, F. |
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Afiliação: |
NATÁLIA DOS SANTOS FERREIRA, UFRRJ; ANAHÍ CONIGLIO, Universidad Nacional de Río Cuarto; MARIANA PUENTE, INTA; FERNANDO HAYASHI SANT'ANNA, PROAD-SUS; GUILLERMO MARONICHE, Universidad Nacional de Mar del Plata; JULIA GARCÍA, INTA; ROMINA MOLINA, UNIVERSIDAD NACIONAL DE RIO CUARTO; SOFIA NIEVAS, UNIVERSIDAD NACIONAL DE RIO CUARTO; CAMILA GAZOLLA VOLPIANO, UFGRS; ADRIANA AMBROSINI, UFRGS; LUCIANE M P PASSAGLIA, UFRGS; RAUL O. PEDRAZA, Universidad Nacional de Tucumán; VERONICA MASSENA REIS, CNPAB; JERRI EDSON ZILLI, CNPAB; FABRICIO CASSAN, Universidad Nacional de Río Cuarto. |
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Título: |
Genome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov. |
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Ano de publicação: |
2022 |
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Fonte/Imprenta: |
International Journal of Systematic and Evolutionary Microbiology, v. 72, n. 8, aug. 2022. |
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ISSN: |
1466-5034 |
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DOI: |
0.1099/ijsem.0.005475 |
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Idioma: |
Inglês |
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Conteúdo: |
Strain Az39T of Azospirillum is a diazotrophic plant growth-promoting bacterium isolated in 1982 from the roots of wheat plants growing in Marcos Juárez, Córdoba, Argentina. It produces indole-3-acetic acid in the presence of l-tryptophan as a precursor, grows at 20-38 °C (optimal 38 °C), and the cells are curved or spiral-shaped, with diameters ranging from 0.5-0.9 to 1.8-2.2 µm. They contain C16 : 0, C18 : 0 and C18 : 1 ω7c/ω6c as the main fatty acids. Phylogenetic analysis of its 16S rRNA gene sequence confirmed that this strain belongs to the genus Azospirillum, showing a close relationship with Azospirillum baldaniorum Sp245T, Azospirillum brasilense Sp7T and Azospirillum formosense CC-Nfb-7T. Housekeeping gene analysis revealed that Az39T, together with five strains of the genus (Az19, REC3, BR 11975, MTCC4035 and MTCC4036), form a cluster apart from A. baldaniorum Sp245T, A. brasilense Sp7T and A. formosense CC-Nfb-7T. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) between Az39T and the aforementioned type strains revealed values below 96 %, the circumscription limit for the species delineation (ANI: 95.3, 94.1 and 94.0 %; dDDH: 62.9, 56.3 and 55.6 %). Furthermore, a phylogeny evaluation of the core proteome, including 809 common shared proteins, showed an independent grouping of Az39T, Az19, REC3, BR 11975, MTCC4035 and MTCC4036. The G+C content in the genomic DNA of these six strains varied from 68.3 to 68.5 %. Based on the combined phylogenetic, genomic and phenotypic characterization presented here, we consider that strain Az39T, along with strains Az19, REC3, BR 11975, MTCC4035 and MTCC4036, are members of a new Azospirillum species, for which the name Azospirillum argentinense sp. nov. is proposed. The type strain is Az39T (=LBPCV39T=BR 148428T=CCCT 22.01T). MenosStrain Az39T of Azospirillum is a diazotrophic plant growth-promoting bacterium isolated in 1982 from the roots of wheat plants growing in Marcos Juárez, Córdoba, Argentina. It produces indole-3-acetic acid in the presence of l-tryptophan as a precursor, grows at 20-38 °C (optimal 38 °C), and the cells are curved or spiral-shaped, with diameters ranging from 0.5-0.9 to 1.8-2.2 µm. They contain C16 : 0, C18 : 0 and C18 : 1 ω7c/ω6c as the main fatty acids. Phylogenetic analysis of its 16S rRNA gene sequence confirmed that this strain belongs to the genus Azospirillum, showing a close relationship with Azospirillum baldaniorum Sp245T, Azospirillum brasilense Sp7T and Azospirillum formosense CC-Nfb-7T. Housekeeping gene analysis revealed that Az39T, together with five strains of the genus (Az19, REC3, BR 11975, MTCC4035 and MTCC4036), form a cluster apart from A. baldaniorum Sp245T, A. brasilense Sp7T and A. formosense CC-Nfb-7T. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) between Az39T and the aforementioned type strains revealed values below 96 %, the circumscription limit for the species delineation (ANI: 95.3, 94.1 and 94.0 %; dDDH: 62.9, 56.3 and 55.6 %). Furthermore, a phylogeny evaluation of the core proteome, including 809 common shared proteins, showed an independent grouping of Az39T, Az19, REC3, BR 11975, MTCC4035 and MTCC4036. The G+C content in the genomic DNA of these six strains varied from 68.3 to 68.5 %. Based on the comb... Mostrar Tudo |
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Palavras-Chave: |
Proteome core. |
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Thesaurus Nal: |
Azospirillum; Phylogeny. |
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Categoria do assunto: |
S Ciências Biológicas |
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Marc: |
LEADER 02871naa a2200349 a 4500
001 2146886
005 2022-09-27
008 2022 bl uuuu u00u1 u #d
022 $a1466-5034
024 7 $a0.1099/ijsem.0.005475$2DOI
100 1 $aFERREIRA, N. dos S.
245 $aGenome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov.$h[electronic resource]
260 $c2022
520 $aStrain Az39T of Azospirillum is a diazotrophic plant growth-promoting bacterium isolated in 1982 from the roots of wheat plants growing in Marcos Juárez, Córdoba, Argentina. It produces indole-3-acetic acid in the presence of l-tryptophan as a precursor, grows at 20-38 °C (optimal 38 °C), and the cells are curved or spiral-shaped, with diameters ranging from 0.5-0.9 to 1.8-2.2 µm. They contain C16 : 0, C18 : 0 and C18 : 1 ω7c/ω6c as the main fatty acids. Phylogenetic analysis of its 16S rRNA gene sequence confirmed that this strain belongs to the genus Azospirillum, showing a close relationship with Azospirillum baldaniorum Sp245T, Azospirillum brasilense Sp7T and Azospirillum formosense CC-Nfb-7T. Housekeeping gene analysis revealed that Az39T, together with five strains of the genus (Az19, REC3, BR 11975, MTCC4035 and MTCC4036), form a cluster apart from A. baldaniorum Sp245T, A. brasilense Sp7T and A. formosense CC-Nfb-7T. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) between Az39T and the aforementioned type strains revealed values below 96 %, the circumscription limit for the species delineation (ANI: 95.3, 94.1 and 94.0 %; dDDH: 62.9, 56.3 and 55.6 %). Furthermore, a phylogeny evaluation of the core proteome, including 809 common shared proteins, showed an independent grouping of Az39T, Az19, REC3, BR 11975, MTCC4035 and MTCC4036. The G+C content in the genomic DNA of these six strains varied from 68.3 to 68.5 %. Based on the combined phylogenetic, genomic and phenotypic characterization presented here, we consider that strain Az39T, along with strains Az19, REC3, BR 11975, MTCC4035 and MTCC4036, are members of a new Azospirillum species, for which the name Azospirillum argentinense sp. nov. is proposed. The type strain is Az39T (=LBPCV39T=BR 148428T=CCCT 22.01T).
650 $aAzospirillum
650 $aPhylogeny
653 $aProteome core
700 1 $aGONIGLIO, A.
700 1 $aPUENTE, M.
700 1 $aSANTANNA, F. H.
700 1 $aMARONICHE, G.
700 1 $aGARCIA, J.
700 1 $aMOLINA, R.
700 1 $aNIEVAS, S.
700 1 $aVOLPIANO, C. G.
700 1 $aAMBROSINI, A.
700 1 $aPASSAGLIA, L. M. P.
700 1 $aPEDRAZA, R. O.
700 1 $aREIS, V. M.
700 1 $aZILLI, J. E.
700 1 $aCASSAN, F.
773 $tInternational Journal of Systematic and Evolutionary Microbiology$gv. 72, n. 8, aug. 2022.
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Embrapa Agrobiologia (CNPAB) |
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| Registros recuperados : 7 | |
| 1. |  | DROSTE, A.; SILVA, A. M. da; SOUZA, I. F. de; WIEBKE-STROHM, B.; BÜCKER-NETO, L.; SAUNER, M. V.; BODANESE-ZANETTINI, M. H. Screening of Brazilian soybean genotypes with high potential for somatic embryogenesis and plant regeneration. Pesquisa Agropecuária Brasileira, Brasília, DF, v. 45, n. 7, p. 715-720, jul. 2010 Título em português: Seleção de genótipos brasileiros de soja com alto potencial para embriogênese somática e regeneração de plantas.| Biblioteca(s): Embrapa Unidades Centrais. |
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| 2. | | WIEBKE-STROHM, B.; BÜCKER-NETO, L.; ALVES, L. B.; BENCKE, M.; PASQUALI, G.; DROSTE, A.; SA, M. F. G. de; WEBER, R. L. M.; PASSAGLIA, L. P.; BODANESE-ZANETTINI, M. H. Expressão do gene da osmotina de Solanum nigrum EM cultivar elite de soja obtida a partir do sistema de transformação que integra bombardeamento/Agrobacterium. In: CONGRESSO BRASILEIRO DE SOJA, 5., 2009, Goiânia. Soja: fator de desenvolvimento do Cone Sul: anais. Londrina: Embrapa Soja, 2009. Na publicação: Grossi de Sá, M.F.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 3. | | BÜCKER NETO, L.; OLIVEIRA, R. R. de; WIEBKE-STROHM, B.; BENCKE, M.; WEBER, R. L. M.; CABREIRA, C.; ABDELNOOR, R. V.; MARCELINO-GUIMARÃES, F. C.; ZANETTINI, M. H. D.; PASSAGLIA, L. M. P. Identification of the soybean HyPRP family and specific gene response to Asian soybean rust disease. Genetics and Molecular Biology, Ribeirão Preto, v. 36, n. 2, p. 214-224, 2013.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 1 |
| Biblioteca(s): Embrapa Soja. |
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| 4. | | CABREIRA, C.; CAGLIARI, A.; BÜCKER-NETO, L.; WIEBKE-STROHM, B.; FREITAS, L. B. de; MARCELINO-GUIMARÃES, F. C.; NEPOMUCENO, A. L.; MARGIS-PINHEIRO, M. M. A. N.; BODANESE-ZANETTINI, M. H. The lesion simulating disease (LSD) gene family as a variable in soybean response to Phakopsora pachyrhizi infection and dehydration. Functional & Integrative Genomics, v. 13, n. 3, p. 323-338, Aug. 2013.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Soja. |
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| 5. | | BENCKE-MALATO, M.; CABREIRA, C.; WIEBKE-STROHM, B.; BÜCKER-NETO, L.; MANCINI, E.; OSORIO, M. B.; HOMRICH, M. S.; TURCHETTO-ZOLET, A. C.; CARVALHO, M. C. C. G. de; STOLF, R.; WEBER, R. L. M.; WESTERGAARD, G.; CASTAGNARO, A. P.; ABDELNOOR, R. V.; MARCELINO-GUIMARÃES, F. C.; MARGIS-PINHEIRO, M.; BODANESE-ZANETTINI, M. H. Genome-wide annotation of the soybean WRKY family and functional characterization of genes involved in response to Phakopsora pachyrhizi infection. BMC Plant Biology, v. 14, n. 1, article 236, Sept. 2014. 18 p.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Soja. |
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| 6. | | WIEBKE-STROHM, B.; PASQUALI, G.; MARGIS-PINHEIRO, M.; BENCKE, M.; BÜCKER-NETO, L.; BECKER-RITT, A. B.; MARTINELLI, A. H. S.; POLACCO, J. C.; STOLF, R.; MARCELINO, F. C.; ABDELNOOR, R. V.; HOMRICH, S. H.; DEL PONTE, E. M.; CARLINI, C. R.; BODANESE-ZANETTINI, M. H. Urease affects soybean susceptibility to fungi. In: BRAZILIAN SYMPOSIUM ON PLANT MOLECULAR BIOLOGY, 3., 2011, Ilhéus. [Abstracts...]. [Ribeirão Preto]: SBG, 2011. 1 p. 1 CD-ROM.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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| 7. | | WIEBKE-STROHM, B.; PASQUALI, G.; MARGIS-PINHEIRO, M.; BENCKE, M.; BÜCKER-NETO, L.; BECKER-RITT, A. B.; MARTINELLI, A. H. S.; RECHENMACHER, C.; POLACCO, J. C.; STOLF, R.; MARCELINO, F. C.; ABDELNOOR, R. V.; HOMRICH, M. S.; DEL PONTE, E. M.; CARLINI, C. R.; CARVALHO, M. C. C. G. de; BODANESE-ZANETTINI, M. H. Ubiquitous urease affects soybean susceptibility to fungi. Plant Molecular Biology, The Hague, v. 79, n. 1/2, p. 75-87, May 2012.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Soja. |
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| Registros recuperados : 7 | |
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