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| Registros recuperados : 45 | |
| 21. |  | PINTO, F. G. da S.; CHUEIRE, L. M. de O.; VASCONCELOS, A. T. R.; NICOLÁS, M. F.; GONZAGA, L.; ANDRE, E.; HUNGRIA, M. Panorama genômico de Rhizobium tropici estirpe PRF 81 (Semia 4080). In: JORNADA ACADÊMICA DA EMBRAPA SOJA, 2005, Londrina. Resumos expandidos. Londrina: Embrapa Soja, 2005. p. 50-55. (Embrapa Soja. Documentos, 268).| Biblioteca(s): Embrapa Soja. |
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| 23. | | BABUJIA, L. C.; SILVA, A. P.; NAKATANI, A. S.; CANTAO, M. E.; VASCONCELOS, A. T. R.; VISENTAINER, J. V.; HUNGRIA, M. Impact of long-term cropping of glyphosate-resistant transgenic soybean [Glycine max (L.) Merr.] on soil microbiome. Transgenic Research, Feb., p.1-6, 2016.| Biblioteca(s): Embrapa Soja; Embrapa Suínos e Aves. |
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| 24. | | DELAMUTA, J. R. M.; GOMES, D. F.; RIBEIRO, R. A.; CHUEIRE, L. M. O.; SOUZA, R. C.; ALMEIDA, L. G. P.; VASCONCELOS, A. T. R.; HUNGRIA, M. Genome sequence of Bradyrhizobium tropiciagri Strain CNPSo 1112T , isolated from a root nodule of Neonotonia wightii. Genome Announcements, v. 3, n. 6, e01482-15, Nov./Dec. 2015.| Biblioteca(s): Embrapa Soja. |
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| 25. | | HELENE, L. C. F.; GOMES, D. F.; DELAMUTA, J. R. M.; RIBEIRO, R. A.; SOUZA, R. C.; ALMEIDA, L. G. P.; VASCONCELOS, A. T. R.; HUNGRIA, M. Genome sequence of Bradyrhizobium viridifuturi strain SEMIA 690T, a nitrogen-fixing symbiont of Centrosema pubescens. Genome Announcements, v. 3, n. 6, e01481-15, Nov./Dec. 2015.| Biblioteca(s): Embrapa Soja. |
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| 26. | | GODOY, L. P.; VASCONCELOS, A. T. R.; CHUEIRE, L. M. de O.; SOUZA, R. C.; NICOLÁS, M. F.; BARCELLOS, F. G.; HUNGRIA, M. Genomic panorama of Bradyrhizobium japonicum CPAC 15, a commercial inoculant strain largely established in Brazilian soils and belonging to the same serogroup as USDA 123. Soil Biology & Biochemistry, v. 40, n. 11, p. 2743-2753, 2008.| Biblioteca(s): Embrapa Soja. |
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| 27. | | BELLINI, R. G.; CORONADO, M. A.; PASCHOAL, A. R.; REGO, T. G. do; HUNGRIA, M.; VASCONCELOS, A. T. R. de; NICOLAS, M. F. Structural analysis of a novel N-carbamoyl-D-amino acid amidohydrolase from a Brazilian Bradyrhizobium japonicum strain: In silico insights by molecular modelling, docking and molecular dynamics. Journal of Molecular Graphics & Modelling, v. 86, p. 35-42, 2019.| Biblioteca(s): Embrapa Soja. |
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| 28. | | BINDE, D. R.; CHUEIRE, L. M. de O.; LUCAS, I. H.; NICOLÁS, M. F.; VASCONCELOS, A. T. R.; GONZAGA, L. de P.; MARTINEZ-ROMERO, E.; BARCELLOS, F. G.; SILVA, M. F. da; GARCIA, J. E.; HUNGRIA, M. Sequenciamento do plasmídeo simbiótico da estirpe CFN 299 de Rhizobium tropici. In: JORNADA ACADÊMICA DA EMBRAPA SOJA, 2005, Londrina. Resumos expandidos. Londrina: Embrapa Soja, 2005. p. 29-34. (Embrapa Soja. Documentos, 268).| Biblioteca(s): Embrapa Soja. |
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| 29. | | BINDE, D. R.; CHUEIRE, L. M. O.; LUCASI. H.; NICOLÁS, M. F.; VASCONCELOS, A. T. R.; GONZAGA, L. P.; SOUZA, R. C.; MARTINEZ-ROMERO, E.; FERNANDO GOMES BARCELLOS, F. G.; SILVA, M. F.; GARCIA, J. E.; HUNGRIA, H. Seqüenciamento do plasmídeo simbiótico da estirpe CFN 299 de Rhizobium tropici. In: SEMANA DE BIOTECNOLOGIA, 1., 2005, Londrina. [Resumos]. Londrina: UEL, 2005. 1 CD-ROM. Resumo - Pdf. 41.| Biblioteca(s): Embrapa Soja. |
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| 30. | | PACCHION, R. G.; CARVALHO, F. M.; THOMPSON, C. E.; FAUSTINO, A. L. F.; NICOLINI, F.; PEREIRA, T. S.; SILVA, R. C. B.; CANTAO, M. E.; GERBER, A.; VASCONCELOS, A. T. R.; AGNEZ-LIMA, L. F. Taxonomic and functional profiles of soil samples from Atlantic Forest and caatinga biomes in northeastern Brazil MicrobiologyOpen, Brussels, v. 3, n. 3, p. 299-315, 2014. DOI: 10.1002/mbo3.169.| Biblioteca(s): Embrapa Suínos e Aves. |
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| 31. | | BINDE, D. R.; HUNGRIA, M.; CHUEIRE, L. M. de O.; LUCAS, I. H.; NICOLÁS, M. F.; VASCONCELOS, A. T. R.; GONZAGA, L. de P.; MARTINEZ-ROMERO, E.; BARCELLOS, F. G.; SILVA, M. F. da. Análise estrutural do plasmídio simbiótico de Rhizobium tropici CFN299. In: JORNADA ACADÊMICA DA EMBRAPA SOJA, 2., 2006, Londrina. Resumos expandidos. Londrina: Embrapa Soja, 2006. p. 102-105. (Embrapa Soja. Documentos, 276).| Biblioteca(s): Embrapa Soja. |
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| 32. | | LOBO, F. P.; GONÇALVES, D. L.; ALVES JÚNIOR, S. L.; GERBER, A. L.; VASCONCELOS, A. T. R. de; BASSO, L. C.; FRANCO, G. R.; SOARES, M. A.; CADETE, R. M.; ROSA, C. A.; STAMBUK, B. U. Draft genome sequence of the D-xylose-fermenting yeast Spathaspora arborariae UFMG-HM19.1AT. Genome Announcements, Washington DC, v. 2, n. 1, p. 1-2, Jan./Feb. 2014.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 33. | | ZULETA, L. F. G.; CUNHA, C. de O.; CARVALHO, F. M. de; CIAPINA, L. P.; SOUZA, R. C; MERCANTE, F. M.; FARIA, S. M. de; BALDANI, J. I.; STRALIOTTO, R.; HUNGRIA, M.; VASCONCELOS, A. T. R. de. The complete genome of Burkholderia phenoliruptrix strain BR3459a, a symbiont of Mimosa flocculosa: highlighting the coexistence of symbiotic and pathogenic genes. BMC Genomics, v.15, p. 535, Jun. 2014.| Biblioteca(s): Embrapa Agropecuária Oeste; Embrapa Soja. |
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| 34. | | ZULETA, L. F. G.; CUNHA, C. de O.; CARVALHO, F. M. de; CIAPINA, L. P.; SOUZA, R. C; MERCANTE, F. M.; FARIA, S. M. de; BALDANI, J. I.; STRALIOTTO, R.; HUNGRIA, M.; VASCONCELOS, A. T. R. de. The complete genome of Burkholderia phenoliruptrix strain BR3459a, a symbiont of Mimosa flocculosa: highlighting the coexistence of symbiotic and pathogenic genes. BMC Genomics, v.15, n. 1, p. 535, Jun. 2014. The complete genome of Burkholderia phenoliruptrix strain BR3459a, a symbiont of Mimosa flocculosa: highlighting the coexistence of symbiotic and pathogenic genes| Biblioteca(s): Embrapa Agrobiologia. |
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| 35. | | SIQUEIRA, A. F.; ORMEÑO-ORRILLO, E.; SOUZA, R. C.; RODRIGUES, E. P.; ALMEIDA, L. G. P.; BARCELLOS, F. G.; BATISTA, J. S. S.; NAKATANI, A. S.; MARTÍNEZ-ROMERO, E.; VASCONCELOS, A. T. R.; HUNGRIA, M. Comparative genomics of Bradyrhizobium japonicum CPAC 15 and Bradyrhizobium diazoefficiens CPAC 7: elite model strains for understanding symbiotic performance with soybean. BMC Genomics, v. 15, n. 420, June 2014. 20 p.| Biblioteca(s): Embrapa Soja. |
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| 36. | | PINTO, F. G. S.; CHUEIRE, L. M. O.; VASCONCELOS, A. T. R.; NICOLÁS, M. F.; ALMEIDA, L. G. P.; SOUZA, R. C.; MENNA, P.; BARCELLOS, F. G.; MEGÍAS, M.; HUNGRIA, M. Novel genes related to nodulation, secretion systems, and surface structures revealed by a genome draft of Rhizobium tropici strain PRF 81. Functional & Integrative Genomics, Heidelberg, v. 9, n. 2, p. 263-270, May 2009.| Biblioteca(s): Embrapa Soja. |
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| 37. | | ORMEÑO-ORRILLO, E.; GOMES, D. F.; CERRO, P. del; VASCONCELOS, A. T. R.; CANCHAYA, C.; ALMEIDA, L. G. P.; MERCANTE, F. M.; JAVIER OLLERO, F.; MEGÍAS, M.; HUNGRIA, M. Genome of Rhizobium leucaenae strains CFN 299T and CPAO 29.8: searching for genes related to a successful symbiotic performance under stressful conditions. BMC Genomics, v. 17, n. 534, 2016.| Biblioteca(s): Embrapa Agropecuária Oeste; Embrapa Soja. |
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| 38. | | HUNGRIA, M.; ASTOLFI FILHO, S.; CHUEIRE, L. M. de O.; NICOLÁS, M. F.; SANTOS, E. B. P.; BULBOL, M. R.; SOUZA FILHO, A.; NOGUEIRA ASSUNÇÃO, E.; GERMANO, M. G.; VASCONCELOS, A. T. R. Genetic characterization of Chromobacterium isolates from black water environments in the Brazilian Amazon. Letters in Applied Microbiology, Oxford, v. 41, n. 1, p. 17-23, July 2005.| Biblioteca(s): Embrapa Soja. |
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| 39. | | ARGE, L. W. P.; MORAIS, G. L.; CARVALHO, J. B.; ZOCOLO, G. J.; OSTER, A. H.; VASCONCELOS, A. T. R. de; DINIZ, L. E. C.; SILVA, E. de O.; BORDALLO, P. do N. Uncovering the transcriptional molecular dynamics of shelf life extension and lignin-based resistance induction to Fusarium pallidoroseum in melon fruit by the use of pulsed-light. Postharvest Biology and Technology, v. 216, n. 113036, 2024. Primeiro autor - Embrapa Soja| Biblioteca(s): Embrapa Soja; Embrapa Uva e Vinho. |
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| 40. | | CUNHA, C. de O. C.; ZULETA, L. F. G.; ALMEIDA, L. G. P. de; CIAPINA, L. P.; BORGES, W. L.; PITARD, R. M.; BALDANI, J. I.; STRALIOTTO, R.; FARIA, S. M. de; HUNGRIA, M.; CAVADA, B. S.; MERCANTE, F. M.; VASCONCELOS, A. T. R. de. Complete genome sequence of Burkholderia phenoliruptrix BR3459a (CLA1), a heat-tolerant, nitrogen-fixing symbiont of Mimosa flocculosa. Journal of Bacteriology, Washington, v. 194, n. 23, p. 6675-6676, Dec. 2012.| Biblioteca(s): Embrapa Agrobiologia; Embrapa Soja. |
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| Registros recuperados : 45 | |
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 | Acesso ao texto completo restrito à biblioteca da Embrapa Agrobiologia. Para informações adicionais entre em contato com cnpab.biblioteca@embrapa.br. |
Registro Completo
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Biblioteca(s): |
Embrapa Agrobiologia. |
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Data corrente: |
14/10/2014 |
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Data da última atualização: |
23/01/2015 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
ZULETA, L. F. G.; CUNHA, C. de O.; CARVALHO, F. M. de; CIAPINA, L. P.; SOUZA, R. C; MERCANTE, F. M.; FARIA, S. M. de; BALDANI, J. I.; STRALIOTTO, R.; HUNGRIA, M.; VASCONCELOS, A. T. R. de. |
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Afiliação: |
SERGIO MIANA DE FARIA, CNPAB; JOSE IVO BALDANI, CNPAB; ROSANGELA STRALIOTTO, CNPAB. |
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Título: |
The complete genome of Burkholderia phenoliruptrix strain BR3459a, a symbiont of Mimosa flocculosa: highlighting the coexistence of symbiotic and pathogenic genes. |
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Ano de publicação: |
2014 |
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Fonte/Imprenta: |
BMC Genomics, v.15, n. 1, p. 535, Jun. 2014. |
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DOI: |
10.1186/1471-2164-15-535 |
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Idioma: |
Português |
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Notas: |
The complete genome of Burkholderia phenoliruptrix strain BR3459a, a symbiont of Mimosa flocculosa: highlighting the coexistence of symbiotic and pathogenic genes |
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Conteúdo: |
BACKGROUND: Burkholderia species play an important ecological role related to xenobiosis, the promotion of plant growth, the biocontrol of agricultural diseases, and symbiotic and non-symbiotic biological nitrogen fixation. Here, we highlight our study as providing the first complete genome of a symbiotic strain of B. phenoliruptrix, BR3459a (=CLA1), which was originally isolated in Brazil from nodules of Mimosa flocculosa and is effective in fixing nitrogen in association with this leguminous species. RESULTS: Genomic comparisons with other pathogenic and non-pathogenic Burkholderia strains grouped B. phenoliruptrix BR3459a with plant-associated beneficial and environmental species, although it shares a high percentage of its gene repertoire with species of the B. cepacia complex (Bcc) and "pseudomallei" group. The genomic analyses showed that the bce genes involved in exopolysaccharide production are clustered together in the same genomic region, constituting part of the Group III cluster of non-pathogenic bacteria. Regarding environmental stresses, we highlight genes that might be relevant in responses to osmotic, heat, cold and general stresses. Furthermore, a number of particularly interesting genes involved in the machinery of the T1SS, T2SS, T3SS, T4ASS and T6SS secretion systems were identified. The xenobiotic properties of strain BR3459a were also investigated, and some enzymes involved in the degradation of styrene, nitrotoluene, dioxin, chlorocyclohexane, chlorobenzene and caprolactam were identified. The genomic analyses also revealed a large number of antibiotic-related genes, the most important of which were correlated with streptomycin and novobiocin. The symbiotic plasmid showed high sequence identity with the symbiotic plasmid of B. phymatum. Additionally, comparative analysis of 545 housekeeping genes among pathogenic and non-pathogenic Burkholderia species strongly supports the definition of a new genus for the second branch, which would include BR3459a. CONCLUSIONS: The analyses of B. phenoliruptrix BR3459a showed key property of fixing nitrogen that together with genes for high tolerance to environmental stresses might explain a successful strategy of symbiosis in the tropics. The strain also harbours interesting sets of genes with biotechnological potential. However, the resemblance of certain genes to those of pathogenic Burkholderia raise concerns about large-scale applications in agriculture or for bioremediation. MenosBACKGROUND: Burkholderia species play an important ecological role related to xenobiosis, the promotion of plant growth, the biocontrol of agricultural diseases, and symbiotic and non-symbiotic biological nitrogen fixation. Here, we highlight our study as providing the first complete genome of a symbiotic strain of B. phenoliruptrix, BR3459a (=CLA1), which was originally isolated in Brazil from nodules of Mimosa flocculosa and is effective in fixing nitrogen in association with this leguminous species. RESULTS: Genomic comparisons with other pathogenic and non-pathogenic Burkholderia strains grouped B. phenoliruptrix BR3459a with plant-associated beneficial and environmental species, although it shares a high percentage of its gene repertoire with species of the B. cepacia complex (Bcc) and "pseudomallei" group. The genomic analyses showed that the bce genes involved in exopolysaccharide production are clustered together in the same genomic region, constituting part of the Group III cluster of non-pathogenic bacteria. Regarding environmental stresses, we highlight genes that might be relevant in responses to osmotic, heat, cold and general stresses. Furthermore, a number of particularly interesting genes involved in the machinery of the T1SS, T2SS, T3SS, T4ASS and T6SS secretion systems were identified. The xenobiotic properties of strain BR3459a were also investigated, and some enzymes involved in the degradation of styrene, nitrotoluene, dioxin, chlorocyclohexane, chlorobe... Mostrar Tudo |
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Palavras-Chave: |
Comparative genomics; FBN; Genômica; Nitrogen fixing; Pathogenic Bacteria. |
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Categoria do assunto: |
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Marc: |
LEADER 03613naa a2200325 a 4500
001 1997358
005 2015-01-23
008 2014 bl --- 0-- u #d
024 7 $a10.1186/1471-2164-15-535$2DOI
100 1 $aZULETA, L. F. G.
245 $aThe complete genome of Burkholderia phenoliruptrix strain BR3459a, a symbiont of Mimosa flocculosa$bhighlighting the coexistence of symbiotic and pathogenic genes.
260 $c2014
500 $aThe complete genome of Burkholderia phenoliruptrix strain BR3459a, a symbiont of Mimosa flocculosa: highlighting the coexistence of symbiotic and pathogenic genes
520 $aBACKGROUND: Burkholderia species play an important ecological role related to xenobiosis, the promotion of plant growth, the biocontrol of agricultural diseases, and symbiotic and non-symbiotic biological nitrogen fixation. Here, we highlight our study as providing the first complete genome of a symbiotic strain of B. phenoliruptrix, BR3459a (=CLA1), which was originally isolated in Brazil from nodules of Mimosa flocculosa and is effective in fixing nitrogen in association with this leguminous species. RESULTS: Genomic comparisons with other pathogenic and non-pathogenic Burkholderia strains grouped B. phenoliruptrix BR3459a with plant-associated beneficial and environmental species, although it shares a high percentage of its gene repertoire with species of the B. cepacia complex (Bcc) and "pseudomallei" group. The genomic analyses showed that the bce genes involved in exopolysaccharide production are clustered together in the same genomic region, constituting part of the Group III cluster of non-pathogenic bacteria. Regarding environmental stresses, we highlight genes that might be relevant in responses to osmotic, heat, cold and general stresses. Furthermore, a number of particularly interesting genes involved in the machinery of the T1SS, T2SS, T3SS, T4ASS and T6SS secretion systems were identified. The xenobiotic properties of strain BR3459a were also investigated, and some enzymes involved in the degradation of styrene, nitrotoluene, dioxin, chlorocyclohexane, chlorobenzene and caprolactam were identified. The genomic analyses also revealed a large number of antibiotic-related genes, the most important of which were correlated with streptomycin and novobiocin. The symbiotic plasmid showed high sequence identity with the symbiotic plasmid of B. phymatum. Additionally, comparative analysis of 545 housekeeping genes among pathogenic and non-pathogenic Burkholderia species strongly supports the definition of a new genus for the second branch, which would include BR3459a. CONCLUSIONS: The analyses of B. phenoliruptrix BR3459a showed key property of fixing nitrogen that together with genes for high tolerance to environmental stresses might explain a successful strategy of symbiosis in the tropics. The strain also harbours interesting sets of genes with biotechnological potential. However, the resemblance of certain genes to those of pathogenic Burkholderia raise concerns about large-scale applications in agriculture or for bioremediation.
653 $aComparative genomics
653 $aFBN
653 $aGenômica
653 $aNitrogen fixing
653 $aPathogenic Bacteria
700 1 $aCUNHA, C. de O.
700 1 $aCARVALHO, F. M. de
700 1 $aCIAPINA, L. P.
700 1 $aSOUZA, R. C
700 1 $aMERCANTE, F. M.
700 1 $aFARIA, S. M. de
700 1 $aBALDANI, J. I.
700 1 $aSTRALIOTTO, R.
700 1 $aHUNGRIA, M.
700 1 $aVASCONCELOS, A. T. R. de
773 $tBMC Genomics$gv.15, n. 1, p. 535, Jun. 2014.
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