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Registros recuperados : 178 | |
101. | | SANTOS, L. F. dos; FREGAPANI, R. M.; FALCAO, L. L.; TOGAWA, R. C.; COSTA, M. M. do C.; LOPES, U. V.; GRAMACHO, K. P.; ALVES, R. M.; MICHELI, F.; MARCELLINO, L. H. First microsatellite markers developed from cupuassu ESTs: application in diversity analysis and cross-species transferability to cacao. PLoS ONE, v. 11, n. 3, e0151074, 2016. Biblioteca(s): Embrapa Amazônia Oriental; Embrapa Recursos Genéticos e Biotecnologia. |
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102. | | RABELLO, A. R.; RANGEL, P. H. N.; GUIMARÃES, C. M.; SALES, R. M. O. B.; SILVA, F. R.; COSTA, M. M. C.; TOGAWA, R. C.; FERREIRA, M. E.; MEHTA, A. Expressão diferencial em genótipos contrastantes de Oryza sativa para a tolerância a seca. In: ENCONTRO DO TALENTO ESTUDANTIL DA EMBRAPA RECURSOS GENÉTICOS E BIOTECNOLOGIA, 11., 2006, Brasília, DF. Anais: resumos dos trabalhos. Brasília, DF: Embrapa Recursos Genéticos e Biotecnologia, 2006. p. 77. Biblioteca(s): Embrapa Arroz e Feijão; Embrapa Recursos Genéticos e Biotecnologia. |
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103. | | SALGADO, F. F.; VIEIRA, L. R.; SILVA, V. N. B.; LEAO, A. P.; GRYNBERG, P.; COSTA, M. M. do C.; TOGAWA, R. C.; SOUSA, C. A. F. de; SOUZA JUNIOR, M. T. Expression analysis of miRNAs and their putative target genes confirm a preponderant role of transcription factors in the early response of oil palm plants to salinity stress. BMC Plant Biology, v. 21, n. 518, 2021. Biblioteca(s): Embrapa Agroenergia; Embrapa Meio-Norte. |
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104. | | SALGADO, F. F.; VIEIRA, L. R.; SILVA, V. N. B.; LEAO, A. P.; GRYNBERG, P.; COSTA, M. M. do C.; TOGAWA, R. C.; SOUSA, C. A. F. de; SOUZA JUNIOR, M. T. Expression analysis of miRNAs and their putative target genes confrm a preponderant role of transcription factors in the early response of oil palm plants to salinity stress. BMC Plant Biology, v. 21, 518, 2021. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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105. | | MARTEL, C. M.; WARRILOW, A. G. S.; JACKSON, C. J.; MULLINS, J. G. L.; TOGAWA, R. C.; PARKER, J. E.; MORRIS, M. S.; DONNISON, I. S.; KELLY, D. E.; KELLY, S. L. Expression, purification and use of the soluble domain of Lactobacillus paracasei beta-fructosidase to optimise production of bioethanol from grass fructans. Bioresource Technology, v. 101, p. 4395-4402, 2010. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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106. | | MATOS, C. B.; FRAGOSO, R. da R.; ANDRADE, L. R. M. de; CORDEIRO, M. C. R.; SILVA, M. S.; TOGAWA, R. C.; ALMEIDA, J. D. de; BARROS, L. M. G. Estratégia para identificação de genes de resistência ao alumínio em planta nativa do cerrado sclerolobium paniculatum. In: ENCONTRO DO TALENTO ESTUDANTIL DA EMBRAPA RECURSOS GENÉTICOS E BIOTECNOLOGIA, 14., 2009, Brasília, DF. [Resumos...] Brasília, DF: Embrapa Recursos Genéticos e Biotecnologia, 2009. Biblioteca(s): Embrapa Cerrados. |
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107. | | VARGAS, L. N.; NOCHI, A. R. F.; CASTRO, P. S. de; CUNHA, A. T. M.; SILVA, T. C. V.; TOGAWA, R. C.; SILVEIRA, M. M.; CAETANO, A. R.; FRANCO, M. M. Differentially methylated regions identified in bovine embryos are not observed in adulthood. Animal Reproduction, v. 20, n. 1, 2023. e20220076. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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108. | | HIGA, R. H.; OLIVEIRA, A. G.; HORITA, L. G.; MIURA, R. T.; INOUE, M. K.; FALCAO, P. R. K.; MANCINI, A. L.; YAMAGISHI, M. E. B.; TOGAWA, R. C.; NESHICH, G. Defining 3D residue environment in protein structures using SCORPION and FORMIGA. Bioinformatics, v. 20, n. 12, p. 1989-1991, 2004. Na publicação: P. R. Kuser. Biblioteca(s): Embrapa Agricultura Digital. |
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109. | | MOTA, A. P. Z.; BRASILEIRO, A. C. M.; VIDIGAL, B.; OLIVEIRA, T. N.; MARTINS, A. da C. Q.; SARAIVA, M. A. de P.; ARAUJO, A. C. G. de; TOGAWA, R. C.; SA, M. F. G. de; GUIMARAES, P. M. Defining the combined stress response in wild Arachis. Scientific Reports, v. 11, n. 1, 11097, 2021. Na publicação: Maria Fatima Grossi-de-Sá. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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110. | | SALGADO, F. F.; SILVA, T. L. C. da; VIEIRA, L. R.; SILVA, V. N. B.; LEAO, A. P.; COSTA, M. M. do C.; TOGAWA, R. C.; SOUSA, C. A. F. de; GRYNBERG, P.; SOUZA JUNIOR, M. T. The early response of oil palm (Elaeis guineensis Jacq.) plants to water deprivation: Expression analysis of miRNAs and their putative target genes, and similarities with the response to salinity stress. Frontiers in Plant Science, n. 13, 970113, 2022. Biblioteca(s): Embrapa Agroenergia; Embrapa Meio-Norte; Embrapa Recursos Genéticos e Biotecnologia. |
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111. | | ARAÚJO, J. F.; CASTRO, A. R. de; COSTA, M. M. do C.; TOGAWA, R. C.; PAPPAS JUNIOR, G. J.; QUIRINO, B. F.; BUSTAMANTE, M. M. C.; WILLIAMSON, L.; HANDELSMAN, J.; KRUGER, R. H. Characterization of soil bacterial assemblies in Brazilian Savanna-Like vegetation reveals acidobacteria dominance. Microbial Ecology, v. 64, p. 760-770, 2012. Biblioteca(s): Embrapa Agroenergia; Embrapa Recursos Genéticos e Biotecnologia. |
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112. | | SARTOR, T.; FALAVIGNA, V. da S.; CATTANI, A. M.; SILVEIRA, C. P.; MALABARBA, J.; PORTO, D. D.; GRYNBERG, P.; TOGAWA, R. C.; COSTA, M. M. do C.; SANTOS, H. P. dos; PASQUALI, G.; REVERS, L. F. Caracterização da função do gene FLC-LIKE durante a transição da ENDO- para dormência na macieira. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 8, 2023, Florianópolis, SC. Anais...FLorianópolis: SBG, 30 de maio a 2 de junho de 2023. p. 67 Biblioteca(s): Embrapa Uva e Vinho. |
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113. | | SARTOR, T.; FALAVIGNA, V. da S.; CATTANI, A. M.; SILVEIRA, C. P.; MALABARBA, J.; PORTO, D. D.; GRYNBERG, P.; TOGAWA, R. C.; COSTA, M. M. do C.; SANTOS, H. P. dos; PASQUALI, G.; REVERS, L. F. Caracterização da função do gene FLC-LIKE durante a transição da Endo- para ecodormencia na macieira. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 8, 2023, Florianópolis, SC. Anais...Florianópolis: SBG, 2023. p. 67. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia; Embrapa Semiárido. |
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114. | | HIGA, R. H.; MONTAGNER, A. J.; TOGAWA, R. C.; FALCAO, P. R. K.; YAMAGISHI, M. E. B.; MANCINI, A. L.; PAPPAS JUNIOR, G.; MIURA, R. T.; HORITA, L. G.; NESHICH, G. ConSSeq: a web-based application for analysis of amino acid conservation based on HSSP database and within context of structure. Bioinformatics, v. 20, n. 12, p. 1983-1985, 2004. Na publicação: P. R. Kuser. Biblioteca(s): Embrapa Agricultura Digital. |
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115. | | FALCAO, L. L.; WERNECK, J. O. S.; TOGAWA, R. C.; COSTA, M. M. do C.; GRYNBERG, P.; SILVA JUNIOR, O. B. da; ALVES, R. M.; ALBUQUERQUE, P. S. B.; MARCELLINO, L. H. Analyses of cupuassu (Theobroma grandiflorum) transcriptome during interaction with Moniliophthora perniciosa, the causal agent of Witches' Broom disease. In: BRAZILIAN BIOTECHNOLOGY CONGRESS, 7.; BIOTECHNOLOGY IBERO-AMERICAN CONGRESS, 2., 2018, Brasília, DF. Proceedings... Brasília, DF: SBBiotec, 2018. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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116. | | FALCAO, L. L.; WERNECK, J. O. S.; TOGAWA, R. C.; COSTA, M. M. do C.; GRYNBERG, P.; SILVA JUNIOR, O. B. da; ALVES, R. M.; ALBUQUERQUE, P. S. B.; MARCELLINO, L. H. Analyses of cupuassu (Theobroma grandiflorum) transcriptome during interaction with Moniliophthora perniciosa, the causal agent of Witches' Broom disease. In: BRAZILIAN BIOTECHNOLOGY CONGRESS, 7.; BIOTECHNOLOGY IBERO-AMERICAN CONGRESS, 2., 2018, Brasília, DF. Proceedings... Brasília, DF: SBBiotec, 2018. Biblioteca(s): Embrapa Amazônia Oriental. |
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117. | | RIBEIRO, C.; TOGAWA, R. C.; NESHICH, I. A. P.; MAZONI, I.; MANCINI, A. L.; MINARDI, R. C. de M.; SILVEIRA, C. H. da; JARDINE, J. G.; SANTORO, M. M.; NESHICH, G. Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteases in silico docked to different inhibitors. BMC Structural Biology, London, v. 10, n. 36, p. 1-16, 2010. Biblioteca(s): Embrapa Agricultura Digital. |
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118. | | RIBEIRO; TOGAWA, R. C.; NESHICH, I. A. P.; MAZONI, I.; MANCINI, A. L.; MINARDI, R. C. de M.; SILVEIRA, C. H. da; JARDINE, J. G.; SANTORO, M. M.; NESHICH, G. Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteases in silico docked to different inhibitors. BMC Structural Biology, London, v. 10, n. 36, p. 1-16, 2010. Disponível em:.Acesso em: 5 jan. 2011. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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119. | | FIRMINO, A. A. P.; FONSECA, F. C. A.; MACEDO, L. L. P.; TOGAWA, R. C.; SILVA JUNIOR, O. B. da; PAPPAS JUNIOR, G. J.; SA, M. F. G. de. Cotton boll weevil (Anthonomus Grandis) transcriptome pyrosequencing and insect-pest control by RNAI gene silencing. In: CONGRESSO BRASILEIRO DE BIOTECNOLOGIA, 3., 2010, Fortaleza. Programa e resumos. Brasília, DF: SBBiotec, 2010. p. 279. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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120. | | ROCHA, G. T.; QUEIROZ, P. R. M.; GRYNBERG, P.; TOGAWA, R. C.; FERREIRA, A. D. C. de L.; NASCIMENTO, I. N. do; GOMES, A. C. M. M.; MONNERAT, R. Biocontrol potential of bacteria belonging to the Bacillus subtilis group against pests and diseases of agricultural interest through genome exploration. Antonie van Leeuwenhoek, v. 116, p. 599-614, 2023. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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Registros recuperados : 178 | |
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Registro Completo
Biblioteca(s): |
Embrapa Mandioca e Fruticultura; Embrapa Recursos Genéticos e Biotecnologia. |
Data corrente: |
15/08/2017 |
Data da última atualização: |
17/04/2023 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Circulação/Nível: |
A - 1 |
Autoria: |
CASTAÑEDA, N. E. N.; ALVES, G. S. C.; ALMEIDA, R. M.; AMORIM, E. P.; FERREIRA, C. F.; TOGAWA, R. C.; COSTA, M. M. do C.; GRYNBERG, P.; SANTOS, J. R. P.; CARES, J. E.; MILLER, R. N. G. |
Afiliação: |
NANCY EUNICE NIÑO CASTAÑEDA, UNB; GABRIEL SERGIO COSTA ALVES, UNB; ROSANE MANSAN ALMEIDA, UNB; EDSON PERITO AMORIM, CNPMF; CLAUDIA FORTES FERREIRA, CNPMF; ROBERTO COITI TOGAWA, CENARGEN; MARCOS MOTA DO CARMO COSTA, CENARGEN; PRISCILA GRYNBERG, Cenargen; JANSEN RODRIGO PEREIRA SANTOS, UNIVERSITY OF CALIFORNIA, USA; JUVENIL ENRIQUE CARES, UNB; ROBERT NEIL GERARD MILLER, UNB. |
Título: |
Gene expression analysis in Musa acuminata during compatible interactions with Meloidogyne incognita. |
Ano de publicação: |
2017 |
Fonte/Imprenta: |
Annals of Botany, v. 119, p. 915-930, 2017. |
DOI: |
10.1093/aob/mcw272 |
Idioma: |
Inglês |
Conteúdo: |
Background and Aims: Endoparasitic root-knot nematodes (RKNs) ( Meloidogyne spp.) cause considerable losses in banana ( Musa spp.), with Meloidogyne incognita a predominant species in Cavendish sub-group bananas. This study investigates the root transcriptome in Musa acuminata genotypes 4297-06 (AA) and Cavendish Grande Naine (CAV; AAA) during early compatible interactions with M. incognita . Methods: Roots were analysed by brightfield light microscopy over a 35 d period to examine nematode penetration and morphological cell transformation. RNA samples were extracted 3, 7 and 10 days after inoculation (DAI) with nematode J2 juveniles, and cDNA libraries were sequenced using lllumina HiSeq technology. Sequences were mapped to the M. acuminata ssp. malaccensis var. Pahang genome sequence, differentially expressed genes (DEGs) identified and transcript representation determined by gene set enrichment and pathway mapping. Key Results: Microscopic analysis revealed a life cycle of M. incognita completing in 24 d in CAV and 27 d in 4279-06. Comparable numbers of DEGs were up- and downregulated in each genotype, with potential involvement of many in early host defence responses involving reactive oxygen species and jasmonate/ethylene signalling. DEGs revealed concomitant auxin metabolism and cell wall modification processes likely to be involved in giant cell formation. Notable transcripts related to host defence included those coding for leucine-rich repeat receptor-like serine/threonine-protein kinases, peroxidases, thaumatin-like pathogenesis-related proteins, and DREB, ERF, MYB, NAC and WRKY transcription factors. Transcripts related to giant cell development included indole acetic acid-amido synthetase GH3.8 genes, involved in auxin metabolism, as well as genes encoding expansins and hydrolases, involved in cell wall modification. Conclusions: Expression analysis in M. acuminata during compatible interactions with RKNs provides insights into genes modulated during infection and giant cell formation. Increased understanding of both defence responses to limit parasitism during compatible interactions and effector-targeted host genes in this complex interaction will facilitate the development of genetic improvement measures for RKNs. MenosBackground and Aims: Endoparasitic root-knot nematodes (RKNs) ( Meloidogyne spp.) cause considerable losses in banana ( Musa spp.), with Meloidogyne incognita a predominant species in Cavendish sub-group bananas. This study investigates the root transcriptome in Musa acuminata genotypes 4297-06 (AA) and Cavendish Grande Naine (CAV; AAA) during early compatible interactions with M. incognita . Methods: Roots were analysed by brightfield light microscopy over a 35 d period to examine nematode penetration and morphological cell transformation. RNA samples were extracted 3, 7 and 10 days after inoculation (DAI) with nematode J2 juveniles, and cDNA libraries were sequenced using lllumina HiSeq technology. Sequences were mapped to the M. acuminata ssp. malaccensis var. Pahang genome sequence, differentially expressed genes (DEGs) identified and transcript representation determined by gene set enrichment and pathway mapping. Key Results: Microscopic analysis revealed a life cycle of M. incognita completing in 24 d in CAV and 27 d in 4279-06. Comparable numbers of DEGs were up- and downregulated in each genotype, with potential involvement of many in early host defence responses involving reactive oxygen species and jasmonate/ethylene signalling. DEGs revealed concomitant auxin metabolism and cell wall modification processes likely to be involved in giant cell formation. Notable transcripts related to host defence included those coding for leucine-rich repeat receptor-like serine/th... Mostrar Tudo |
Palavras-Chave: |
Monocotyledons; Root-knot nematode. |
Thesagro: |
Meloidogyne Incognita; Musa Acuminata. |
Thesaurus NAL: |
Biotic stress; Transcriptome. |
Categoria do assunto: |
-- |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/166757/1/Gene-expression-analysis-in-Musa-Artigo-1.pdf
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/162722/1/mcw272.pdf
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Marc: |
LEADER 03215naa a2200325 a 4500 001 2076414 005 2023-04-17 008 2017 bl uuuu u00u1 u #d 024 7 $a10.1093/aob/mcw272$2DOI 100 1 $aCASTAÑEDA, N. E. N. 245 $aGene expression analysis in Musa acuminata during compatible interactions with Meloidogyne incognita.$h[electronic resource] 260 $c2017 520 $aBackground and Aims: Endoparasitic root-knot nematodes (RKNs) ( Meloidogyne spp.) cause considerable losses in banana ( Musa spp.), with Meloidogyne incognita a predominant species in Cavendish sub-group bananas. This study investigates the root transcriptome in Musa acuminata genotypes 4297-06 (AA) and Cavendish Grande Naine (CAV; AAA) during early compatible interactions with M. incognita . Methods: Roots were analysed by brightfield light microscopy over a 35 d period to examine nematode penetration and morphological cell transformation. RNA samples were extracted 3, 7 and 10 days after inoculation (DAI) with nematode J2 juveniles, and cDNA libraries were sequenced using lllumina HiSeq technology. Sequences were mapped to the M. acuminata ssp. malaccensis var. Pahang genome sequence, differentially expressed genes (DEGs) identified and transcript representation determined by gene set enrichment and pathway mapping. Key Results: Microscopic analysis revealed a life cycle of M. incognita completing in 24 d in CAV and 27 d in 4279-06. Comparable numbers of DEGs were up- and downregulated in each genotype, with potential involvement of many in early host defence responses involving reactive oxygen species and jasmonate/ethylene signalling. DEGs revealed concomitant auxin metabolism and cell wall modification processes likely to be involved in giant cell formation. Notable transcripts related to host defence included those coding for leucine-rich repeat receptor-like serine/threonine-protein kinases, peroxidases, thaumatin-like pathogenesis-related proteins, and DREB, ERF, MYB, NAC and WRKY transcription factors. Transcripts related to giant cell development included indole acetic acid-amido synthetase GH3.8 genes, involved in auxin metabolism, as well as genes encoding expansins and hydrolases, involved in cell wall modification. Conclusions: Expression analysis in M. acuminata during compatible interactions with RKNs provides insights into genes modulated during infection and giant cell formation. Increased understanding of both defence responses to limit parasitism during compatible interactions and effector-targeted host genes in this complex interaction will facilitate the development of genetic improvement measures for RKNs. 650 $aBiotic stress 650 $aTranscriptome 650 $aMeloidogyne Incognita 650 $aMusa Acuminata 653 $aMonocotyledons 653 $aRoot-knot nematode 700 1 $aALVES, G. S. C. 700 1 $aALMEIDA, R. M. 700 1 $aAMORIM, E. P. 700 1 $aFERREIRA, C. F. 700 1 $aTOGAWA, R. C. 700 1 $aCOSTA, M. M. do C. 700 1 $aGRYNBERG, P. 700 1 $aSANTOS, J. R. P. 700 1 $aCARES, J. E. 700 1 $aMILLER, R. N. G. 773 $tAnnals of Botany$gv. 119, p. 915-930, 2017.
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Embrapa Mandioca e Fruticultura (CNPMF) |
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