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Registros recuperados : 94 | |
61. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | GUIMARAES, P. M.; BRASILEIRO, A. C. M.; MORGANTE, C. V.; ROBERTS, P. A.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; BERTIOLI, S. C. de M. L.; MARTINS, A.; BERTIOLI, D. Global transcriptome analysis of peanut wild species under biotic and abiotic stress. In: INTERNATIONAL CONFERENCE OF THE PEANUT RESEARCH COMMUNITY ON ADVANCES IN ARACHIS THROUGH GENOMICS AND BIOTECNOLOGY, 5., 2011, Brasília, DF. Book of abstracts... Brasília, DF: Embrapa Genetic Researces and Biotecnology, 2011. p. 33. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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62. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | GUIMARAES, P. M.; BRASILEIRO, A. C. M.; MORGANTE, C. V.; ROBERTS, P. A.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; BERTIOLI, S. C. de M. L.; MARTINS, A.; BERTIOLI, D. Global transcriptome analysis of peanut wild species under biotic and abiotic stress. In: INTERNATIONAL CONFERENCE OF THE PEANUT RESEARCH COMMUNITY ON ADVANCES IN ARACHIS THROUGH GENOMICS AND BIOTECNOLOGY, 5., 2011, Brasília, DF. Book of abstracts... Brasília, DF: Embrapa Genetic Researces and Biotecnology, 2011. p. 33. Biblioteca(s): Embrapa Semiárido. |
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63. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | GUIMARAES, P. M.; BRASILEIRO, A. C. M.; MORGANTE, C. V.; ROBERTS, P. A.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; BERTIOLI, S. C. de M. L.; MARTINS, A.; MORETZSOHN, M. de C.; BERTIOLI, D. Global transcriptome analysis of two peanut wild species (Arachis stenosperma and A. duranensis) under biotic and abiotic stress. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 3., 2011, Ilhéus. Resumos... Ribeirão Preto: SBG, 2011. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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64. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | GUIMARAES, P. M.; BRASILEIRO, A. C. M.; MORGANTE, C. V.; ROBERTS, P. A.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; BERTIOLI, S. C. de M. L.; MARTINS, A.; MORETZSOHN, M. de C.; BERTIOLI, D. Global transcriptome analysis of two peanut wild species (Arachis stenosperma and A. duranensis) under biotic and abiotic stress. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 3., 2011, Ilhéus. Resumos... Ribeirão Preto: SBG, 2011. 1 CD-ROM. Biblioteca(s): Embrapa Semiárido. |
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65. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | PETROLI, C. D.; SANSALONI, C. P; CARLING, J.; STEANE, D. A.; VAILLANCOURT, R. E.; MYBURG, A. M.; SILVA JUNIOR, O. B. da; PAPPAS JUNIOR, G. J.; KILIAN, A.; GRATTAPAGLIA, D. Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome. PLoS ONE, v. 7, n. 9, set. 2012. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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66. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | GUIMARAES, P. M.; MORGANTE, C. V.; ROBERTS, P. A.; SILVA JUNIOR, O. B. da; ARRAIS, L; BERTIOLI, S. C. de M. L.; ARAUJO, A. C. G. de; MORETZSOHN, M. de C.; BERTIOLI, D.; BRASILEIRO, A. C. M. Gene expression revealed during the interaction of resistant Arachis stenosperma and Meloidogyne arenaria. In: INTERNATIONAL CONFERENCE ON LEGUME GENETICS AND GENOMICS, 6., 2012, Hyderabad, India. Programe & Abstract book...Hyderabad: ICRISAT, 2012. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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67. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | GUIMARAES, P. M.; MORGANTE, C. V.; ROBERTS, P. A.; SILVA JUNIOR, O. B. da; ARRAIS, L; BERTIOLI, S. C. de M. L.; ARAUJO, A. C. G. de; MORETZSOHN, M. de C.; BERTIOLI, D.; BRASILEIRO, A. C. M. Gene expression revealed during the interaction of resistant Arachis stenosperma and Meloidogyne arenaria. In: INTERNATIONAL CONFERENCE ON LEGUME GENETICS AND GENOMICS, 6., 2012, Hyderabad, India. Programe & abstract book... Hyderabad: ICRISAT, 2012. Biblioteca(s): Embrapa Semiárido. |
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68. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | BRASILEIRO, A. C. M.; MORGANTE, C. V.; SILVA, A. K.; MARTINS, A. C. Q.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; BERTIOLI, D. J.; BERTIOLI, S. C. de M. L.; GUIMARAES, P. M. Next Generation Sequencing (NGS) for discovery of droughtresponsive genes in wild Arachis. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 3., 2011, Ilhéus. Resumos... Ribeirão Preto: SBG, 2011. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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69. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | BRASILEIRO, A. C. M.; MORGANTE, C. V.; SILVA, A. K.; MARTINS, A. C. Q.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; BERTIOLI, D. J.; BERTIOLI, S. C. de M. L.; GUIMARAES, P. M. Next Generation Sequencing (NGS) for discovery of droughtresponsive genes in wild Arachis. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 3., 2011, Ilhéus. Resumos... Ribeirão Preto: SBG, 2011. 1 CD-ROM. Biblioteca(s): Embrapa Semiárido. |
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70. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | ARAUJO, A. C. G. de; GUIMARAES, P. M.; MORGANTE, C. V.; GUIMARÃES, L. A.; SILVA JUNIOR, O. B. da; ROBERTS, P. A.; BERTIOLI, S. C. de M. L.; BERTIOLI, D.; BRASILEIRO, A. C. M. A survey of differentially expressed genes in resistant wild arachis during nematode infection. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 4., 2013, Bento Gonçalves. Resumos... Bento Gonçalves: SBG, 2013. p. 58. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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71. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | ARAUJO, A. C. G. de; MORGANTE, C. V.; GUIMARAES, P. M.; SILVA JUNIOR, O. B. da; ROBERTS, P. A.; BERTIOLI, S. C. de M. L.; BERTIOLI, D.; BRASILEIRO, A. C. M. A survey of differentially expressed genes in resistant wild arachis during nematode infection. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 4., 2013, Bento Gonçalves. Resumos... Bento Gonçalves: SBG, 2013. p. 58. Biblioteca(s): Embrapa Semiárido. |
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72. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | BRASILEIRO, A. C. M.; MORGANTE, C. V.; BERTIOLI, S. C. de M. L.; ARAUJO, A. C. G. de; PAPPAS, G.; SILVA JUNIOR, O. B. da; MARTINS, A. C. Q.; BERTIOLI, D.; GUIMARAES, P. M. Transcriptome analysis in response to gradual water deficit in Arachis wild relatives. In: INTERNATIONAL CONFERENCE ON LEGUME GENETICS AND GENOMICS, 6., 2012, Hyderabad, India. Programe & abstract book... Hyderabad: ICRISAT, 2012. Biblioteca(s): Embrapa Semiárido. |
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73. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | BUTLER, J. B.; FREEMAN, J. S.; POTTS, B. M.; VAILLANCOURT, R. E.; GRATTAPAGLIA, D.; SILVA JUNIOR, O. B. da; SIMMONS, B.; SCHMUTZ, J.; BARRY, K. W.; LEE, D. J.; HEALEY, A.; FURTADO, A.; HENRY, R. J.; BATEN, A.; KING, G.; SHEPHERD, M. Comparative analysis of the terpene synthase gene family between Eucalyptus and Corymbia. In: PLANT AND ANIMAL GENOME CONFERENCE, 25., 2017, San Diego. [Abstracts...]. San Diego, CA: [s.n.], 2017. P0598. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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74. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | BUTLER, J. B.; FREEMAN, J. S.; POTTS, B. M.; VAILLANCOURT, R. E.; GRATTAPAGLIA, D.; SILVA JUNIOR, O. B. da; SIMMONS, B. A.; HEALEY, A. L.; SCHMUTZ, J.; BARRY, K. W.; LEE, D. J.; HENRY, R. J.; KING, G. J.; BATEN, A.; SHEPHERD, M. Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus. Heredity, v. 121, n. 1, p. 87-104, 2018. Na publicação: Orzenil B. Silva-Junior. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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75. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | PASSOS, M. A. N.; CRUZ, V. O. de; EMEDIATO, F. L.; TEIXEIRA, C. C. de; AZEVEDO, V. C. R.; BRASILEIRO, A. C. M.; AMORIM, E. P.; FERREIRA, C. F.; MARTINS, N. F.; TOGAWA, R. C.; PAPPAS JÚNIOR, G. J.; SILVA JUNIOR, O. B. da; MILLER, R. T N. G. Analysis of the leaf transcriptome of Musa acuminata during interaction with Mycosphaerella musicola: gene assembly, annotation and marker development. BMC Genomics, v.14, n.78, 2013. Biblioteca(s): Embrapa Mandioca e Fruticultura; Embrapa Recursos Genéticos e Biotecnologia. |
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76. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | MILLER, R. N. G.; PASSOS, M. A. N.; IMEDIATO, F. L.; CRUZ, V. O.; TEIXEIRA, C. de C.; FIGUEIREDO, L. F. de A.; MARTINS, N. F.; TOGAWA, R. C.; COSTA, M. M. do C.; SILVA JUNIOR, O. B. da; PAPPAS JUNIOR, G. J. Keynote: understanding plant immunity: transcriptome profiling in Musa-pathogen interactions using next generation sequencing. In: PROMUSA SYMPOSIUM, 2011, Salvador. Bananas and plantains: toward sustainable global production and improved uses: abstracts. [Montepellier.]: [Bioversity International, 2011. p. 116-117. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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77. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | MARTINS, A. C. Q.; MORGANTE, C. V.; SILVA, A. K.; GALHARDO, I. C.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; BERTIOLI, S. C. de M. L.; BERTIOLI, D. J.; MILLER, R. N. G.; BRASILEIRO, A. C. M.; GUIMARAES, P. M. Large scale transcriptome analysis of wild peanut (Arachis stenosperma) inoculated with Passalora personata, the causal agent of late leaf spot. In: INTERNATIONAL CONFERENCE OF THE PEANUT RESEARCH COMMUNITY ON ADVANCES IN ARACHIS THROUGH GENOMICS AND BIOTECNOLOGY, 5., 2011, Brasília, DF. Book of abstracts... Brasília, DF: Embrapa Genetic Researces and Biotecnology, 2011. p. 76. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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78. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | MARTINS, A. C. Q.; MORGANTE, C. V.; SILVA, A. K.; GALHARDO, I. C.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; BERTIOLI, S. C. de M. L.; BERTIOLI, D. J.; MILLER, R. N. G.; BRASILEIRO, A. C. M.; GUIMARAES, P. M. Large scale transcriptome analysis of wild peanut (Arachis stenosperma) inoculated with Passalora personata, the causal agent of late leaf spot. In: INTERNATIONAL CONFERENCE OF THE PEANUT RESEARCH COMMUNITY ON ADVANCES IN ARACHIS THROUGH GENOMICS AND BIOTECNOLOGY, 5., 2011, Brasília, DF. Book of abstracts... Brasília, DF: Embrapa Genetic Researces and Biotecnology, 2011. p. 76. Biblioteca(s): Embrapa Semiárido. |
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79. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | CARNEIRO, F. de A.; AQUINO, S. O. de; MATTOS, N. G.; VALERIANO, J. C.; CARNEIRO, W. W. de J.; RODRIGUES, G. C.; CARVALHO, M. A. de F.; VEIGA, A. D.; GRATTAPAGLIA, D.; SILVA JUNIOR, O. B. da; MARRACCINI, P.; VIEIRA JUNIOR, I. C.; BALESTRE, M.; ANDRADE, A. C. Estudo de associação genômica ampla para importantes características agronômicas em Coffea canephora. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 10., 2019, Vitória, ES. Pesquisa, inovação e sustentabilidade dos cafés do Brasil. Brasília, DF: Embrapa Café, 2019. 5 p. Título em inglês: Genome-wide association studies for important agronomic traits in Coffea canephora. Biblioteca(s): Embrapa Café; Embrapa Recursos Genéticos e Biotecnologia. |
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80. | ![Imagem marcado/desmarcado](/consulta/web/img/desmarcado.png) | CARNEIRO, F. de A.; AQUINO, S. O. de; MATTOS, N. G.; VALERIANO, J. C.; CARNEIRO, W. W. de J.; RODRIGUES, G. C.; CARVALHO, M. A. de F.; VEIGA, A. D.; GRATTAPAGLIA, D.; SILVA JUNIOR, O. B. da; MARRACCINI, P.; VIEIRA JUNIOR, I. C.; BALESTRE, M.; ANDRADE, A. C. Estudo de associação genômica ampla para importantes características agronômicas em Coffea canephora. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 10., 2019, Vitória, ES. Pesquisa, inovação e sustentabilidade dos cafés do Brasil. Brasília, DF: Embrapa Café, 2019. 5 p. Título em inglês: Genome-wide association studies for important agronomic traits in Coffea canephora. Biblioteca(s): Embrapa Agricultura Digital. |
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Registros recuperados : 94 | |
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![](/consulta/web/img/deny.png) | Acesso ao texto completo restrito à biblioteca da Embrapa Recursos Genéticos e Biotecnologia. Para informações adicionais entre em contato com cenargen.biblioteca@embrapa.br. |
Registro Completo
Biblioteca(s): |
Embrapa Recursos Genéticos e Biotecnologia. |
Data corrente: |
19/02/2013 |
Data da última atualização: |
06/03/2023 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Circulação/Nível: |
A - 1 |
Autoria: |
PETROLI, C. D.; SANSALONI, C. P; CARLING, J.; STEANE, D. A.; VAILLANCOURT, R. E.; MYBURG, A. M.; SILVA JUNIOR, O. B. da; PAPPAS JUNIOR, G. J.; KILIAN, A.; GRATTAPAGLIA, D. |
Afiliação: |
CESAR D. PETROLI, UnB; CAROLINA P. SANSALONI, UnB; JASON CARLING, Diversity Arrays Technology Pty Ltd., Yarralumla, Australia; DOROTHY A. STEANE, University of Tasmania, Hobart, Tasmania, Australia; RENE E. VAILLANCOURT, University of Tasmania, Hobart, Tasmania, Australia; ALEXANDER A. MYBURG, University of Pretoria, Pretoria, South Africa; ORZENIL BONFIM DA SILVA JUNIOR, CENARGEN; GEORGIOS JOANNIS PAPPAS JUNIOR, CENARGEN; ANDRZEJ KILIAN, Diversity Arrays Technology Pty Ltd., Yarralumla, Australia; DARIO GRATTAPAGLIA, CENARGEN. |
Título: |
Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome. |
Ano de publicação: |
2012 |
Fonte/Imprenta: |
PLoS ONE, v. 7, n. 9, set. 2012. |
Idioma: |
Inglês |
Conteúdo: |
Diversity Arrays Technology (DArT) provides a robust, high throughput, cost-effective method to query thousands of sequence polymorphisms in a single assay. Despite the extensive use of this genotyping platform for numerous plant species, little is known regarding the sequence attributes and genome-wide distribution of DArT markers. We investigated the genomic properties of the 7,680 DArT marker probes of a Eucalyptus array, by sequencing them, constructing a high density linkage map and carrying out detailed physical mapping analyses to the Eucalyptus grandis reference genome. A consensus linkage map with 2,274 DArT markers anchored to 210 microsatellites and a framework map, with improved support for ordering, displayed extensive collinearity with the genome sequence. Only 1.4 Mbp of the 75 Mbp of still unplaced scaffold sequence was captured by 45 linkage mapped but physically unaligned markers to the 11 main Eucalyptus pseudochromosomes, providing compelling evidence for the quality and completeness of the current Eucalyptus genome assembly. A highly significant correspondence was found between the locations of DArT markers and predicted gene models, while most of the 89 DArT probes unaligned to the genome correspond to sequences likely absent in E. grandis, consistent with the pan-genomic feature of this multi-Eucalyptus species DArT array. These comprehensive linkage-to-physical mapping analyses provide novel data regarding the genomic attributes of DArT markers in plant genomes in general and for Eucalyptus in particular. DArT markers preferentially target the gene space and display a largely homogeneous distribution across the genome, thereby providing superb coverage for mapping and genome-wide applications in breeding and diversity studies. Data reported on these ubiquitous properties of DArT markers will be particularly valuable to researchers working on less-studied crop species who already count on DArT genotyping arrays but for which no reference genome is yet available to allow such detailed characterization. MenosDiversity Arrays Technology (DArT) provides a robust, high throughput, cost-effective method to query thousands of sequence polymorphisms in a single assay. Despite the extensive use of this genotyping platform for numerous plant species, little is known regarding the sequence attributes and genome-wide distribution of DArT markers. We investigated the genomic properties of the 7,680 DArT marker probes of a Eucalyptus array, by sequencing them, constructing a high density linkage map and carrying out detailed physical mapping analyses to the Eucalyptus grandis reference genome. A consensus linkage map with 2,274 DArT markers anchored to 210 microsatellites and a framework map, with improved support for ordering, displayed extensive collinearity with the genome sequence. Only 1.4 Mbp of the 75 Mbp of still unplaced scaffold sequence was captured by 45 linkage mapped but physically unaligned markers to the 11 main Eucalyptus pseudochromosomes, providing compelling evidence for the quality and completeness of the current Eucalyptus genome assembly. A highly significant correspondence was found between the locations of DArT markers and predicted gene models, while most of the 89 DArT probes unaligned to the genome correspond to sequences likely absent in E. grandis, consistent with the pan-genomic feature of this multi-Eucalyptus species DArT array. These comprehensive linkage-to-physical mapping analyses provide novel data regarding the genomic attributes of DArT markers in pla... Mostrar Tudo |
Palavras-Chave: |
Caracterização genómica; Dart genotyping; Genoma do Eucalipto; Microsatellite genotyping. |
Thesagro: |
Genoma. |
Categoria do assunto: |
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Marc: |
LEADER 02933naa a2200289 a 4500 001 1949877 005 2023-03-06 008 2012 bl uuuu u00u1 u #d 100 1 $aPETROLI, C. D. 245 $aGenomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome.$h[electronic resource] 260 $c2012 520 $aDiversity Arrays Technology (DArT) provides a robust, high throughput, cost-effective method to query thousands of sequence polymorphisms in a single assay. Despite the extensive use of this genotyping platform for numerous plant species, little is known regarding the sequence attributes and genome-wide distribution of DArT markers. We investigated the genomic properties of the 7,680 DArT marker probes of a Eucalyptus array, by sequencing them, constructing a high density linkage map and carrying out detailed physical mapping analyses to the Eucalyptus grandis reference genome. A consensus linkage map with 2,274 DArT markers anchored to 210 microsatellites and a framework map, with improved support for ordering, displayed extensive collinearity with the genome sequence. Only 1.4 Mbp of the 75 Mbp of still unplaced scaffold sequence was captured by 45 linkage mapped but physically unaligned markers to the 11 main Eucalyptus pseudochromosomes, providing compelling evidence for the quality and completeness of the current Eucalyptus genome assembly. A highly significant correspondence was found between the locations of DArT markers and predicted gene models, while most of the 89 DArT probes unaligned to the genome correspond to sequences likely absent in E. grandis, consistent with the pan-genomic feature of this multi-Eucalyptus species DArT array. These comprehensive linkage-to-physical mapping analyses provide novel data regarding the genomic attributes of DArT markers in plant genomes in general and for Eucalyptus in particular. DArT markers preferentially target the gene space and display a largely homogeneous distribution across the genome, thereby providing superb coverage for mapping and genome-wide applications in breeding and diversity studies. Data reported on these ubiquitous properties of DArT markers will be particularly valuable to researchers working on less-studied crop species who already count on DArT genotyping arrays but for which no reference genome is yet available to allow such detailed characterization. 650 $aGenoma 653 $aCaracterização genómica 653 $aDart genotyping 653 $aGenoma do Eucalipto 653 $aMicrosatellite genotyping 700 1 $aSANSALONI, C. P 700 1 $aCARLING, J. 700 1 $aSTEANE, D. A. 700 1 $aVAILLANCOURT, R. E. 700 1 $aMYBURG, A. M. 700 1 $aSILVA JUNIOR, O. B. da 700 1 $aPAPPAS JUNIOR, G. J. 700 1 $aKILIAN, A. 700 1 $aGRATTAPAGLIA, D. 773 $tPLoS ONE$gv. 7, n. 9, set. 2012.
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Embrapa Recursos Genéticos e Biotecnologia (CENARGEN) |
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