| |
|
|
|
Registro Completo |
|
Biblioteca(s): |
Embrapa Agropecuária Oeste; Embrapa Amapá; Embrapa Amazônia Oriental; Embrapa Clima Temperado; Embrapa Meio Ambiente; Embrapa Meio-Norte; Embrapa Pantanal; Embrapa Rondônia; Embrapa Semiárido; Embrapa Unidades Centrais. |
|
Data corrente: |
28/07/1993 |
|
Data da última atualização: |
30/03/2020 |
|
Autoria: |
REUNIAO DA CULTURA DO ARROZ IRRIGADO, 14., 1985, Pelotas. |
|
Título: |
Anais... |
|
Ano de publicação: |
1985 |
|
Fonte/Imprenta: |
Pelotas: EMBRAPA-CPATB, 1985. |
|
Páginas: |
465 p. |
|
Série: |
(EMBRAPA-CPATB. Documentos, 26). |
|
Idioma: |
Português |
|
Conteúdo: |
Fitomelhoramento; Bioclimatologia e praticas culturais; Fertilidade, nutricao de plantas e manejo de agua; Fitossanidade; Sementes, tecnologia e qualidade de graos. |
|
Palavras-Chave: |
Brasil; Congress; Congresso; Controle de praga; Cultivar; Cultivation; Cultivo; Cultural methods; Irrigated rice; Melhoramento genetico; Nematodeo; Oriza sativa; Pelotas; Planta daninha; Pre germinada; Quality; Rio Grande do Sul; Rotacao; Seed; Sistema; Toxicidade. |
|
Thesagro: |
Adubação; Água; Arroz; Arroz Irrigado; Arroz Vermelho; Bioclimatologia; Brusone; Calcário; Colheita; Doença; Ferro; Fertilidade; Fertilidade do Solo; Fósforo; Fungicida; Herbicida; Inundação; Manejo; Manejo de Água; Nitrogênio; Nutrição Vegetal; Oryza Sativa; Plantio; Praga; Pratica Cultural; Produção; Qualidade; Rendimento; Semente; Soca; Soja; Solo; Tecnologia; Tratamento. |
|
Thesaurus Nal: |
bioclimatology; Brazil; herbicides; irrigation; pest control; plant breeding; plant nutrition; Rice; soil fertility; technology; water management. |
|
Categoria do assunto: |
--
A Sistemas de Cultivo |
|
Marc: |
LEADER 02314nam a2200925 a 4500
001 1738388
005 2020-03-30
008 1985 bl uuuu u01u1 u #d
100 1 $aREUNIAO DA CULTURA DO ARROZ IRRIGADO, 14., 1985, Pelotas.
245 $aAnais...
260 $aPelotas: EMBRAPA-CPATB$c1985
300 $a465 p.
490 $a(EMBRAPA-CPATB. Documentos, 26).
520 $aFitomelhoramento; Bioclimatologia e praticas culturais; Fertilidade, nutricao de plantas e manejo de agua; Fitossanidade; Sementes, tecnologia e qualidade de graos.
650 $abioclimatology
650 $aBrazil
650 $aherbicides
650 $airrigation
650 $apest control
650 $aplant breeding
650 $aplant nutrition
650 $aRice
650 $asoil fertility
650 $atechnology
650 $awater management
650 $aAdubação
650 $aÁgua
650 $aArroz
650 $aArroz Irrigado
650 $aArroz Vermelho
650 $aBioclimatologia
650 $aBrusone
650 $aCalcário
650 $aColheita
650 $aDoença
650 $aFerro
650 $aFertilidade
650 $aFertilidade do Solo
650 $aFósforo
650 $aFungicida
650 $aHerbicida
650 $aInundação
650 $aManejo
650 $aManejo de Água
650 $aNitrogênio
650 $aNutrição Vegetal
650 $aOryza Sativa
650 $aPlantio
650 $aPraga
650 $aPratica Cultural
650 $aProdução
650 $aQualidade
650 $aRendimento
650 $aSemente
650 $aSoca
650 $aSoja
650 $aSolo
650 $aTecnologia
650 $aTratamento
653 $aBrasil
653 $aCongress
653 $aCongresso
653 $aControle de praga
653 $aCultivar
653 $aCultivation
653 $aCultivo
653 $aCultural methods
653 $aIrrigated rice
653 $aMelhoramento genetico
653 $aNematodeo
653 $aOriza sativa
653 $aPelotas
653 $aPlanta daninha
653 $aPre germinada
653 $aQuality
653 $aRio Grande do Sul
653 $aRotacao
653 $aSeed
653 $aSistema
653 $aToxicidade
Download
Esconder MarcMostrar Marc Completo |
|
Registro original: |
Embrapa Clima Temperado (CPACT) |
|
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
URL |
Voltar
|
|
|
Registro Completo
|
Biblioteca(s): |
Embrapa Café; Embrapa Recursos Genéticos e Biotecnologia. |
|
Data corrente: |
06/03/2017 |
|
Data da última atualização: |
29/03/2017 |
|
Tipo da produção científica: |
Artigo em Anais de Congresso |
|
Autoria: |
ANDRADE, A. C.; SILVA JUNIOR, O. B. da; CARNEIRO, F.; MARRACCINI, P.; GRATTAPAGLIA, D. |
|
Afiliação: |
ALAN CARVALHO ANDRADE, SAPC; ORZENIL BONFIM DA SILVA JUNIOR, Cenargen; UFLA; CIRAD; DARIO GRATTAPAGLIA, Cenargen. |
|
Título: |
Towards GWAS and Genomic Prediction in Coffee: Development and Validation of a 26K SNP Chip for Coffea Canephora. |
|
Ano de publicação: |
2017 |
|
Fonte/Imprenta: |
In: PLANT & ANIMAL GENOME, 25., 2017, San Diego. Final program & exhibite guide... San Diego: USDA, 2017. |
|
Idioma: |
Inglês |
|
Conteúdo: |
Genome-wide SNP genotyping platforms aiming at high-throughput and high-precision genotyping constitute an essential tool to advance breeding by genomic prediction and gene discovery by GWAS. Recent advances in coffee genomics with the sequencing of the Coffea canephora reference genome, has provided the coffee scientific community the necessary resource to develop a SNPs toolbox for genome-wide genotyping. C. canephora, an allogamous diploid species, and one of the parents of the allotetraploid C. arabica, has been an important source of genetic variability for breeding programs of both cultivated species. Highly heterozygous genomes such as C. canephora require a much higher sequence depth to reach acceptable marker call rates and genotype accuracy, when using sequence-based genotyping methods such that their cost effectiveness may not be realized. Here we describe the development and validation of a 26K Axiom SNP array (Affymetrix) whose genome- wide distributed SNP content was discovered from pooled whole-genome resequencing of C. canephora accessions covering most of its known genetic diversity. Besides facilitating low cost, high marker density, polymorphism and speed of data generation, the platform displays high genotype call accuracy and reproducibility. Genotyping validation resulted in 24,073 SNPs (94.6%) successfully converted out of the 25,456 SNPs on the array. 20,982 markers(87.1%) were scored as providing high-resolution genotypic data in a set of 800 individuals of a breeding population in which 19,586 (81.4%) were polymorphic and 1,396 (5.8%) were monomorphic. The remaining set of 3,091 (12.8%) successfully converted markers were of lower accuracy in the studied sample and may require additional cluster analysis to proper biological interpretation, i.e. targeting CNVs. This large validated SNP collection provides a powerful tool for molecular breeding and population genetics investigation within coffee species. Some preliminary results of a GWAS using this genotyping platform will be presented. MenosGenome-wide SNP genotyping platforms aiming at high-throughput and high-precision genotyping constitute an essential tool to advance breeding by genomic prediction and gene discovery by GWAS. Recent advances in coffee genomics with the sequencing of the Coffea canephora reference genome, has provided the coffee scientific community the necessary resource to develop a SNPs toolbox for genome-wide genotyping. C. canephora, an allogamous diploid species, and one of the parents of the allotetraploid C. arabica, has been an important source of genetic variability for breeding programs of both cultivated species. Highly heterozygous genomes such as C. canephora require a much higher sequence depth to reach acceptable marker call rates and genotype accuracy, when using sequence-based genotyping methods such that their cost effectiveness may not be realized. Here we describe the development and validation of a 26K Axiom SNP array (Affymetrix) whose genome- wide distributed SNP content was discovered from pooled whole-genome resequencing of C. canephora accessions covering most of its known genetic diversity. Besides facilitating low cost, high marker density, polymorphism and speed of data generation, the platform displays high genotype call accuracy and reproducibility. Genotyping validation resulted in 24,073 SNPs (94.6%) successfully converted out of the 25,456 SNPs on the array. 20,982 markers(87.1%) were scored as providing high-resolution genotypic data in a set of 800 individ... Mostrar Tudo |
|
Palavras-Chave: |
Coffee Berry Borer; Coffee canephora. |
|
Thesagro: |
Coffea Canephora. |
|
Categoria do assunto: |
-- |
|
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/157203/1/Coffe-genomics.pdf
|
|
Marc: |
LEADER 02724nam a2200193 a 4500
001 2066344
005 2017-03-29
008 2017 bl uuuu u00u1 u #d
100 1 $aANDRADE, A. C.
245 $aTowards GWAS and Genomic Prediction in Coffee$bDevelopment and Validation of a 26K SNP Chip for Coffea Canephora.$h[electronic resource]
260 $aIn: PLANT & ANIMAL GENOME, 25., 2017, San Diego. Final program & exhibite guide... San Diego: USDA$c2017
520 $aGenome-wide SNP genotyping platforms aiming at high-throughput and high-precision genotyping constitute an essential tool to advance breeding by genomic prediction and gene discovery by GWAS. Recent advances in coffee genomics with the sequencing of the Coffea canephora reference genome, has provided the coffee scientific community the necessary resource to develop a SNPs toolbox for genome-wide genotyping. C. canephora, an allogamous diploid species, and one of the parents of the allotetraploid C. arabica, has been an important source of genetic variability for breeding programs of both cultivated species. Highly heterozygous genomes such as C. canephora require a much higher sequence depth to reach acceptable marker call rates and genotype accuracy, when using sequence-based genotyping methods such that their cost effectiveness may not be realized. Here we describe the development and validation of a 26K Axiom SNP array (Affymetrix) whose genome- wide distributed SNP content was discovered from pooled whole-genome resequencing of C. canephora accessions covering most of its known genetic diversity. Besides facilitating low cost, high marker density, polymorphism and speed of data generation, the platform displays high genotype call accuracy and reproducibility. Genotyping validation resulted in 24,073 SNPs (94.6%) successfully converted out of the 25,456 SNPs on the array. 20,982 markers(87.1%) were scored as providing high-resolution genotypic data in a set of 800 individuals of a breeding population in which 19,586 (81.4%) were polymorphic and 1,396 (5.8%) were monomorphic. The remaining set of 3,091 (12.8%) successfully converted markers were of lower accuracy in the studied sample and may require additional cluster analysis to proper biological interpretation, i.e. targeting CNVs. This large validated SNP collection provides a powerful tool for molecular breeding and population genetics investigation within coffee species. Some preliminary results of a GWAS using this genotyping platform will be presented.
650 $aCoffea Canephora
653 $aCoffee Berry Borer
653 $aCoffee canephora
700 1 $aSILVA JUNIOR, O. B. da
700 1 $aCARNEIRO, F.
700 1 $aMARRACCINI, P.
700 1 $aGRATTAPAGLIA, D.
Download
Esconder MarcMostrar Marc Completo |
|
Registro original: |
Embrapa Café (CNPCa) |
|
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
Fechar
|
| Expressão de busca inválida. Verifique!!! |
|
|
