Data/hora: 13/06/2024 06:13:15

Biblioteca(s): | Embrapa Agroenergia.
Data corrente: | 22/08/2023
Data da última atualização: | 19/04/2024
Autoria: | ABREU, C. G. de; ROESCH, L. F. W.; ANDREOTE, F. D.; SILVA, S. R.; MORAES, T. S. J. de; ZIED, D. C.; SIQUEIRA, F. G. de; DIAS, E. S.; VARANI, A. M.; PYLRO, V. S.
Afiliação: | CARLOS GODINHO DE ABREU, FEDERAL UNIVERSITY OF LAVRAS; LUIZ FERNANDO WURDIG ROESCH, UNIVERSITY OF FLORIDA; FERNANDO DINI ANDREOTE, “LUIZ DE QUEIROZ” COLLEGE OF AGRICULTURE, UNIVERSITY OF SÃO PAULO; SAURA RODRIGUES SILVA, UNIVERSITY OF FLORIDA; TATIANA SILVEIRA JUNQUEIRA DE MORAES, FEDERAL UNIVERSITY OF LAVRAS; DIEGO CUNHA ZIED, SÃO PAULO STATE UNIVERSITY (UNESP); FELIX GONCALVES DE SIQUEIRA, CNPAE; EUSTÁQUIO SOUZA DIAS, FEDERAL UNIVERSITY OF LAVRAS; ALESSANDRO M. VARANI, SÃO PAULO STATE UNIVERSITY (UNESP); VICTOR SATLER PYLRO, FEDERAL UNIVERSITY OF LAVRAS.
Título: | Decoding the chromosome-scale genome of the nutrient-rich Agaricus subrufescens: A Resource for fungal biology and biotechnology.
Ano de publicação: | 2023
Fonte/Imprenta: | Research in Microbiology, v. 174, n. 8, 104116, 2023.
DOI: | https://doi.org/10.1016/j.resmic.2023.104116
Idioma: | Inglês
Conteúdo: | Agaricus subrufescens, also known as the "sun mushroom," has significant nutritional 27 and medicinal value. However, its short shelf life due to the browning process results 28 in post-harvest losses unless it's quickly dehydrated. This restricts its availability to 29 consumers in the form of capsules. A genome sequence of A. subrufescens may lead 30 to new cultivation alternatives or the application of gene editing strategies to delay the 31 browning process. We assembled a chromosome-scale genome using a hybrid 32 approach combining Illumina and Nanopore sequencing. The genome was assembled 33 into 13 chromosomes and 31 unplaced scaffolds, totaling 44.5 Mb with 96.5% 34 completeness and 47.24% GC content. 14,332 protein-coding genes were identified, 35 with 64.6% of the genome covered by genes and 23.41% transposable elements. The mitogenome was circularized and encoded fourteen typical mitochondrial genes. Four polyphenol oxidase (PPO) genes and the Mating-type locus were identified. Phylogenomic analysis supports the placement of A. subrufescens in the Agaricomycetes clade. This is the first available genome sequence of a strain of the "sun mushroom." Results are available through a Genome Browser (https://plantgenomics.ncc.unesp.br/gen.php?id=Asub) and can support further fungal biological and genomic studies.
Thesaurus Nal: | Agaricus subrufescens.
Categoria do assunto: | --
Registro original: | Embrapa Agroenergia (CNPAE)
Exemplares: | CNPAE - (4188-1) - UPC - AP - DD -  -  -  - DIS