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| 3. |  | BASSO, V. M.; JACOVINE, L. A. G.; ALVES, R. R.; SILVA, F. L. da. Contribuição da certificação florestal no cumprimento da legislação em plantações florestais. In: CONGRESSO BRASILEIRO SOBRE FLORESTAS ENERGÉTICAS, 1., 2009, Belo Horizonte. Anais. Colombo: Embrapa Florestas, 2009. 1 CD-ROM. (Embrapa Florestas. Documentos, 178). Seção: Sustentabilidade Ambiental, Social e Econômica.| Biblioteca(s): Embrapa Florestas. |
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| 11. | | SILVA, F. L. da; FELIPE, S. H. S.; LEAO, N. V. M.; SHIMIZU, E. S. C. Teste de germinação de sementes de cumarú (Dipteryx odorata (Aubl.) Willd.) sob diferentes substratos e temperaturas. In: SEMANA DE INTEGRAÇÃO, CIÊNCIA, ARTE E TECNOLOGIA, 1., 2010, Castanhal. [Educação, trabalho, cultura e inovação tecnológica para a sustentabilidade da Amazônia]. [Castanhal]: Instituto de Educação, Ciência e Tecnologia, 2010. SICAT 2010.| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 13. | | SILVA, F. L. da; CARVALHO, H. G. de; MARTIN, V. G.; LAMPERT, V. do N. Desenvolvimento de uma aplicação do tipo glossário com os principais indicadores utilizados na produção de bovinos de corte. In: SIMPÓSIO DE INICIAÇÃO CIENTÍFICA DA EMBRAPA PECUÁRIA SUL, 11., 2021, Bagé, RS. Resumos... Bagé: Embrapa Pecuária Sul, 2021. p. 8. (Embrapa Pecuária Sul. Eventos técnicos & científicos, 4). Ana Cristina Mazzocato, editora técnica.| Biblioteca(s): Embrapa Pecuária Sul. |
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| 16. | | FELIPE, S. H. S.; SILVA, F. L. da; LEAO, N. V. M.; SHIMIZU, E. S. C. Comportamento germinativo de sementes de morototó armazenadas sob câmara fria analisadas em diferentes temperaturas e substratos. In: SEMANA DE INTEGRAÇÃO, CIÊNCIA, ARTE E TECNOLOGIA, 1., 2010, Castanhal. [Educação, trabalho, cultura e inovação tecnológica para a sustentabilidade da Amazônia]. [Castanhal]: Instituto de Educação, Ciência e Tecnologia, 2010. SICAT 2010.| Biblioteca(s): Embrapa Amazônia Oriental. |
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| Registros recuperados : 80 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Café. |
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Data corrente: |
25/09/2020 |
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Data da última atualização: |
25/09/2020 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 2 |
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Autoria: |
ALKIMIM, E. R.; CAIXETA, E. T.; SOUSA, T. V.; SILVA, F. L. da; SAKYAMA, N. S.; ZAMBOLIM, L. |
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Afiliação: |
EMILLY RUAS ALKIMIM, UNIVERSIDADE FEDERAL DE VIÇOSA; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa; TIAGO VIEIRA SOUSA, UNIVERSIDADE FEDERAL DE VIÇOSA; FELIPE LOPES DA SILVA, UNIVERSIDADE FEDERAL DE VIÇOSA; NEY SUSSUMU SAKIYAMA, UNIVERSIDADE FEDERAL DE VIÇOSA; LAÉRCIO ZAMBOLIM, UNIVERSIDADE FEDERAL DE VIÇOSA. |
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Título: |
High-throughput targeted genotyping using next-generation sequencing applied in Coffea canephora breeding. |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
Euphytica, v. 214, p. 50, 2018. |
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DOI: |
https://doi.org/10.1007/s10681-018-2126-2 |
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Idioma: |
Inglês |
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Conteúdo: |
The use of molecular markers to detect polymorphism at DNA level is one of the most significant developments in molecular biology techniques. With the development of new next-generation sequencing technologies, the discovery of SNP became easier and faster, and the costs of data point were reduced. The development and use of SNP markers for coffee have provided new perspectives for the evaluation of genetic diversity and population structure via different statistical approaches. In this study, 72 Coffea canephora genotypes were analyzed to identify the SNP markers and apply them to genetic studies and selection of parents/hybrids in genetic breeding. As many as 117,450 SNP were identified using the RAPiD Genomics platform. After quality analyses, 33,485 SNP were validated for analyses of genetic diversity and population structure. Genotypes were separated based on their varietal groups, and Hybrids were differentiated using the clustering and Bayesian approach. Coffee accessions mistakenly identified in the germplasm and breeding program were detected. The Conilon varietal group presented the lowest genetic dissimilarity values, suggesting the introduction of new accessions in the germplasm bank. The highest genetic distances values were observed among genotypes of the heterotic groups (Conilon and Robusta). The markers were efficient in evaluating the genetic diversity and population structure of C. canephora. Promising crosses were selected within and between the varietal groups. Hybrids with greater genetic distances were selected, which were important for C. canephora breeding programs. MenosThe use of molecular markers to detect polymorphism at DNA level is one of the most significant developments in molecular biology techniques. With the development of new next-generation sequencing technologies, the discovery of SNP became easier and faster, and the costs of data point were reduced. The development and use of SNP markers for coffee have provided new perspectives for the evaluation of genetic diversity and population structure via different statistical approaches. In this study, 72 Coffea canephora genotypes were analyzed to identify the SNP markers and apply them to genetic studies and selection of parents/hybrids in genetic breeding. As many as 117,450 SNP were identified using the RAPiD Genomics platform. After quality analyses, 33,485 SNP were validated for analyses of genetic diversity and population structure. Genotypes were separated based on their varietal groups, and Hybrids were differentiated using the clustering and Bayesian approach. Coffee accessions mistakenly identified in the germplasm and breeding program were detected. The Conilon varietal group presented the lowest genetic dissimilarity values, suggesting the introduction of new accessions in the germplasm bank. The highest genetic distances values were observed among genotypes of the heterotic groups (Conilon and Robusta). The markers were efficient in evaluating the genetic diversity and population structure of C. canephora. Promising crosses were selected within and between the varietal ... Mostrar Tudo |
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Thesaurus NAL: |
Hybrids; Polymorphism; Population structure. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/216202/1/Alkimim-et-al-2018-1.pdf
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Marc: |
LEADER 02307naa a2200229 a 4500
001 2125108
005 2020-09-25
008 2018 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1007/s10681-018-2126-2$2DOI
100 1 $aALKIMIM, E. R.
245 $aHigh-throughput targeted genotyping using next-generation sequencing applied in Coffea canephora breeding.$h[electronic resource]
260 $c2018
520 $aThe use of molecular markers to detect polymorphism at DNA level is one of the most significant developments in molecular biology techniques. With the development of new next-generation sequencing technologies, the discovery of SNP became easier and faster, and the costs of data point were reduced. The development and use of SNP markers for coffee have provided new perspectives for the evaluation of genetic diversity and population structure via different statistical approaches. In this study, 72 Coffea canephora genotypes were analyzed to identify the SNP markers and apply them to genetic studies and selection of parents/hybrids in genetic breeding. As many as 117,450 SNP were identified using the RAPiD Genomics platform. After quality analyses, 33,485 SNP were validated for analyses of genetic diversity and population structure. Genotypes were separated based on their varietal groups, and Hybrids were differentiated using the clustering and Bayesian approach. Coffee accessions mistakenly identified in the germplasm and breeding program were detected. The Conilon varietal group presented the lowest genetic dissimilarity values, suggesting the introduction of new accessions in the germplasm bank. The highest genetic distances values were observed among genotypes of the heterotic groups (Conilon and Robusta). The markers were efficient in evaluating the genetic diversity and population structure of C. canephora. Promising crosses were selected within and between the varietal groups. Hybrids with greater genetic distances were selected, which were important for C. canephora breeding programs.
650 $aHybrids
650 $aPolymorphism
650 $aPopulation structure
700 1 $aCAIXETA, E. T.
700 1 $aSOUSA, T. V.
700 1 $aSILVA, F. L. da
700 1 $aSAKYAMA, N. S.
700 1 $aZAMBOLIM, L.
773 $tEuphytica$gv. 214, p. 50, 2018.
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Embrapa Café (CNPCa) |
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