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| Registros recuperados : 258 | |
| 161. |  | SALGADO, L. R.; LIMA, R.; SANTOS, B. F. dos; SHIRAKAWA, K. T.; VILELA, M. de A.; ALMEIDA, N. F.; PEREIRA. R. M.; NEPOMUCENO, A. L.; CHIARI, L. De novo RNA sequencing and analysis of the transcriptome of signalgrass (Urochloa decumbens) roots exposed to aluminum. Plant Growth Regulation, v. 83, p. 157-170, 2017.| Biblioteca(s): Embrapa Soja. |
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| 162. | | SALGADO, L. R.; LIMA, R.; SANTOS, B. F. dos; SHIRAKAWA, K. T.; VILELA, M. de M.; ALMEIDA, N. F.; PEREIRA, R. M.; NEPOMUCENO, A. L.; CHIARI, L. De novo RNA sequencing and analysis of the transcriptome of signalgrass (Urochloa decumbens) roots exposed to aluminum. Plant Growth Regulation, v. 83, n. 1, p. 157-170, 2017.| Biblioteca(s): Embrapa Gado de Corte. |
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| 163. | | SILVA, E. S. da; AUGUSTI, M. L.; MEDEIROS, R. D. de; LIMA, A. C. L.; ALBUQUERQUE, J. de A. A. de; SANTOS, B. R. dos; PORTELA, E. C. Ocorrência de Naupactus optatus (Coleoptera: Curculionidae) em mogno-africano no Brasil. Ciência Floresta, Santa Maria, v. 32, n. 2, p. 1011-1023, abr./jun. 2022.| Biblioteca(s): Embrapa Roraima. |
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| 164. | | SANTOS, B. M. dos; NUNES, I. J.; SOUZA, J. C. de; NUNES, V. A.; VIANA, J. A. C.; COSTA, C. de P. Osteodistrofias do frontal de bovinos dos estados de Goias, Mato Grosso, Mato Grosso do Sul e Minas Gerais. Arquivo Brasileiro de Medicina Veterinaria e Zootecnia, Belo Horizonte, v.43, n.1, p.61-70, 1991.| Biblioteca(s): Embrapa Cerrados. |
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| 166. | | OLIVEIRA, N. A. de; REIS, R. C.; VIANA, E. de S.; SANTOS, B. de J. R. dos; JESUS, J. L. de. Determinação dos teores de amilose e amilopectina do amido de bananas e plátanos. In: JORNADA CIENTÍFICA EMBRAPA MANDIOCA E FRUTICULTURA, 10., 2016: Cruz das Almas, BA. Traduzindo ciência para o mundo : resumos. Brasília, DF : Embrapa, 2016.| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 168. | | TONON, R. V.; SANTOS, B. A. DOS; COUTO, C. DE C.; STEPHAN, M. P.; SILVA, C. M.; AZEVEDO, T. de L.; CABRAL, L. M. C. Enzymatic hydrolysis of shrimp wastewater concentrated by ultrafiltration. In: TOTAL FOOD, 2014, Norwich. Science and technology for the economic and sustainable exploitation of agri-food chain wastes and co-products: abstracts. Norwich: [IFR], 2014. 1 p.| Biblioteca(s): Embrapa Agroindústria de Alimentos. |
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| 169. | | ESTIMA-SILVA, P.; MARCOLONGO-PEREIRA, C.; SANTOS, B. L. dos; COELHO, A. C. B.; AMARAL, L. A.; LIM, A.; BOLIN, S. R.; SCHILD, A. L. Equine multinodular pulmonary fibrosis in southern Brazil: pathology and differential diagnosis. Pesquisa Veterinária Brasileira, Rio de Janeiro, v. 37, n. 11, p. 1247-1252, novembro 2017. Título em português: Fibrose pulmonar multinodular em equinos no Sul do Rio Grande do Sul: patologia e diagnóstico diferencial.| Biblioteca(s): Embrapa Unidades Centrais. |
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| 172. | | DEUS, T. R. V. de; SANTOS, B. L. S.; WALKER, A.; SOUZA, M. A. de; CABRAL, L. H. B.; SIMOES, W. L.; OLIVEIRA, A. R. de. Fitossociologia de plantas daninhas em área de produção de cana-de-açúcar cultivada sob diferentes quantidades de palhada. In: JORNADA DE INICIAÇÃO CIENTÍFICA DA EMBRAPA SEMIÁRIDO, 7.; JORNADA DE INICIAÇÃO CIENTÍFICA DA FACEPE/UNIVASF, 1., 2012, Petrolina. Anais... Petrolina: Embrapa Semiárido, 2012. p. 241-247. 1 CD-ROM. (Embrapa Semiárido. Documentos, 248).| Biblioteca(s): Embrapa Semiárido. |
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| 174. | | ZAWADNEAK, M. A. C.; LAVORANTI, O. J.; PIMENTEL, I. C.; TREVISAN, C.; SANTOS, B.; ZAMBON, F. R.; LECHINHOSKI, F.; GIOVANINI, B.; CUQUEL, F. L. Incidência de mancha de alternaria em alface cultivada sob adubação convencional e orgânica. Horticultura Brasileira, Brasília DF, v. 23, n. 2, ago. 2005. Suplemento. 1 CD-ROM. Edição dos Resumos Expandidos do Congresso Brasileiro de Olericultura, 45; Congresso Brasileiro de Floricultura e Plantas Ornamentais, 15; Congresso Brasileiro de Cultura de Tecidos de Plantas, 2., 2005, Fortaleza.| Biblioteca(s): Embrapa Florestas. |
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| 175. | | CURADO, F. F.; SEGUNDO, W. T. B.; SANTOS, B. A. C.; SOUZA JUNIOR, I. P.; OLIVEIRA, L. C. L. de; RIBEIRO, I. M. Gestão participativa para o desenvolvimento sustentável da comunidade Ilha Mem de Sá, Itaporanga D'Ajuda, Sergipe. In: CONGRESSO BRASILEIRO DE AGROECOLOGIA, 6.; CONGRESSO LATINO AMERICANO DE AGROECOLOGIA, 2., 2009, Curitiba. Agricultura familiar e camponesa experiências passadas e presentes construindo um futuro sustentável: anais. Curitiba: ABA: SOCLA, 2009. p. 2367| Biblioteca(s): Embrapa Tabuleiros Costeiros. |
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| 176. | | SILVA, R.; FILGUEIRAS, L.; SANTOS, B.; COLELHO, M.; SILVA, M.; ESTRADA-BONILLA, G.; VIDAL, M. S.; BALDANI, J. I.; MENESES, C. Gluconacetobacter diazotrophicus changes the molecular mechanisms of root development in Oryza sativa L. growing under water stress International Journal of Molecular Science, v. 21, n. 1, p. 333-353, 2020.| Biblioteca(s): Embrapa Agrobiologia. |
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| 177. | | SANTOS, B. D. B. dos; RAMALHO, F. de S.; MALAQUIAS, J. B.; LIRA, A. C. S.; PACHÚ, J. K. S.; FERNANDES, F. S.; ZANUNCIO, J. C. How predation by Podisus nigrispinus is influenced by developmental stage and density of its prey Alabama argillacea. Entomologia Experimentalis et Applicata, n. 158, p. 142-151, 2016.| Biblioteca(s): Embrapa Algodão. |
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| 178. | | SANTOS, B. D. B DOS.; RAMALHO, F. de S.; MALAQUIAS, J. B.; LIRA, A. C. S.; PACHÚ, J. K. S.; FERNANDES, F. S.; ZANUNCIO, J. C. How predation by Podisus nigrispinus is influenced by development stage and density of its prey alabama argillacea. Entomologia Experimentalis et Applicata, v. 158, p. 142-151, 2016.| Biblioteca(s): Embrapa Algodão. |
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| 179. | | SILVA, A. G.; LIMA, B. M.; SANTOS, B. A.; LIMA, T. O.; BAIA, K. S.; MARTINS, C. L.; EL-HUSNY, J. C. Infestação de Bemisia tabaci (Hemiptera: Aleyrodidae) em cultivares de soja no polo Paragominas de grãos, Estado do Pará. In: CONGRESSO BRASILEIRO DE ENTOMOLOGIA, 27.; CONGRESSO LATINO-AMERICANO DE ENTOMOLOGIA, 10., 2018, Gramado. Saúde, ambiente e agricultura: anais. Gramado: SEB, 2018. p. 1437.| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 180. | | MORAIS, D. de L. B.; JUHÁSZ, A. C. P.; SANTOS, B. O.; PIMENTA, S.; RABELLO, H. de O.; RESENDE, M. D. V. de. Estimativas de parâmetros em progênies de meios irmãos de Jatropha curcas. In: CONGRESSO BRASILEIRO DE PESQUISA EM PINHÃO MANSO, 1., 2009, Brasília, DF. Pesquisa, desenvolvimento e inovação: tecnologia para biocombústiveis: anais. São Paulo: ABPPM; Brasília, DF: Embrapa Agroenergia, 2009.| Biblioteca(s): Embrapa Cerrados. |
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| Registros recuperados : 258 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Gado de Corte. |
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Data corrente: |
10/11/2017 |
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Data da última atualização: |
17/04/2018 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 2 |
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Autoria: |
SALGADO, L. R.; LIMA, R.; SANTOS, B. F. dos; SHIRAKAWA, K. T.; VILELA, M. de M.; ALMEIDA, N. F.; PEREIRA, R. M.; NEPOMUCENO, A. L.; CHIARI, L. |
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Afiliação: |
LEONARDO RIPPEL SALGADO, Embrapa Beef Cattle, Campo Grande, Mato Grosso do Sul, Brazil; RODOLPHO LIMA, Federal University of Grande Dourados, Dourados, Mato Grosso do Sul, Brazil; BRUNO FERREIRA DOS SANTOS, Federal University of Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil; KARINA TAMIE SHIRAKAWA, Federal University of Grande Dourados, Dourados, Mato Grosso do Sul, Brazil; MARIANE DE MENDONCA VILELA, CNPGC; NALVO FRANCO ALMEIDA, Federal University of Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil; RODRIGO MATHEUS PEREIRA, Federal University of Grande Dourados, Dourados, Mato Grosso do Sul, Brazil; ALEXANDRE LIMA NEPOMUCENO, CNPSO; LUCIMARA CHIARI, CNPGC. |
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Título: |
De novo RNA sequencing and analysis of the transcriptome of signalgrass (Urochloa decumbens) roots exposed to aluminum. |
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Ano de publicação: |
2017 |
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Fonte/Imprenta: |
Plant Growth Regulation, v. 83, n. 1, p. 157-170, 2017. |
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DOI: |
10.1007/s10725-017-0291-2 |
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Idioma: |
Inglês |
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Conteúdo: |
Acidic soils occupy a vast area in the world, and the aluminum (Al) in these soils can directly interact with plant cells and tissues to inhibit their growth and reduce yields. The signalgrass Urochloa decumbens cv. Basilisk (syn. Brachiaria decumbens cv. Basilisk), a widely sown tropical forage grass, is recognized for its high productivity under intensive use, vigorous growth, ease of establishment, and good forage value throughout the year, as well as its exceptional adaptation to infertile acid soils. We sequenced the transcriptome from roots of U. decumbens cv. Basilisk under two conditions, with and without Al, using Illumina paired-end sequencing technology and performed de novo assembly of those reads, which yielded 164,920 transcripts. Of these transcripts, 113,918 were assigned a putative protein function through comparisons with different gene set databases. Additionally, 13,375 simple sequence repeat (SSR) markers were identified. Digital gene expression analyses were conducted to identify 6698 differentially expressed genes between treatments, revealing a great differences in the root transcriptional landscape when exposed to aluminum. An extensive annotation of the differentially expressed genes (DEGs), made possible to identify several transcripts with putative functions correlated to aluminum exposure, most belonging to vesicle transportation, cell wall modifications and metal handling ontologies. In this work, abundant, high-quality transcripts were obtained, providing a reference platform for future biotechnological studies and breeding programs for this species and its close relatives. MenosAcidic soils occupy a vast area in the world, and the aluminum (Al) in these soils can directly interact with plant cells and tissues to inhibit their growth and reduce yields. The signalgrass Urochloa decumbens cv. Basilisk (syn. Brachiaria decumbens cv. Basilisk), a widely sown tropical forage grass, is recognized for its high productivity under intensive use, vigorous growth, ease of establishment, and good forage value throughout the year, as well as its exceptional adaptation to infertile acid soils. We sequenced the transcriptome from roots of U. decumbens cv. Basilisk under two conditions, with and without Al, using Illumina paired-end sequencing technology and performed de novo assembly of those reads, which yielded 164,920 transcripts. Of these transcripts, 113,918 were assigned a putative protein function through comparisons with different gene set databases. Additionally, 13,375 simple sequence repeat (SSR) markers were identified. Digital gene expression analyses were conducted to identify 6698 differentially expressed genes between treatments, revealing a great differences in the root transcriptional landscape when exposed to aluminum. An extensive annotation of the differentially expressed genes (DEGs), made possible to identify several transcripts with putative functions correlated to aluminum exposure, most belonging to vesicle transportation, cell wall modifications and metal handling ontologies. In this work, abundant, high-quality transcripts were obtained... Mostrar Tudo |
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Palavras-Chave: |
Molecular markers; RNA sequencing; Urochloa genus. |
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Thesagro: |
Brachiaria Decumbens. |
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Thesaurus NAL: |
Aluminum. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/166583/1/De-novo-RNA-sequencing-and-analysis.pdf
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Marc: |
LEADER 02506naa a2200289 a 4500
001 2079489
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008 2017 bl uuuu u00u1 u #d
024 7 $a10.1007/s10725-017-0291-2$2DOI
100 1 $aSALGADO, L. R.
245 $aDe novo RNA sequencing and analysis of the transcriptome of signalgrass (Urochloa decumbens) roots exposed to aluminum.$h[electronic resource]
260 $c2017
520 $aAcidic soils occupy a vast area in the world, and the aluminum (Al) in these soils can directly interact with plant cells and tissues to inhibit their growth and reduce yields. The signalgrass Urochloa decumbens cv. Basilisk (syn. Brachiaria decumbens cv. Basilisk), a widely sown tropical forage grass, is recognized for its high productivity under intensive use, vigorous growth, ease of establishment, and good forage value throughout the year, as well as its exceptional adaptation to infertile acid soils. We sequenced the transcriptome from roots of U. decumbens cv. Basilisk under two conditions, with and without Al, using Illumina paired-end sequencing technology and performed de novo assembly of those reads, which yielded 164,920 transcripts. Of these transcripts, 113,918 were assigned a putative protein function through comparisons with different gene set databases. Additionally, 13,375 simple sequence repeat (SSR) markers were identified. Digital gene expression analyses were conducted to identify 6698 differentially expressed genes between treatments, revealing a great differences in the root transcriptional landscape when exposed to aluminum. An extensive annotation of the differentially expressed genes (DEGs), made possible to identify several transcripts with putative functions correlated to aluminum exposure, most belonging to vesicle transportation, cell wall modifications and metal handling ontologies. In this work, abundant, high-quality transcripts were obtained, providing a reference platform for future biotechnological studies and breeding programs for this species and its close relatives.
650 $aAluminum
650 $aBrachiaria Decumbens
653 $aMolecular markers
653 $aRNA sequencing
653 $aUrochloa genus
700 1 $aLIMA, R.
700 1 $aSANTOS, B. F. dos
700 1 $aSHIRAKAWA, K. T.
700 1 $aVILELA, M. de M.
700 1 $aALMEIDA, N. F.
700 1 $aPEREIRA, R. M.
700 1 $aNEPOMUCENO, A. L.
700 1 $aCHIARI, L.
773 $tPlant Growth Regulation$gv. 83, n. 1, p. 157-170, 2017.
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Embrapa Gado de Corte (CNPGC) |
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