| |
|
|
|
Registro Completo |
|
Biblioteca(s): |
Embrapa Café. |
|
Data corrente: |
08/12/2017 |
|
Data da última atualização: |
15/12/2017 |
|
Tipo da produção científica: |
Artigo em Periódico Indexado |
|
Autoria: |
SOUSA, T. V.; CAIXETA, E. T.; ALKIMIM, E. R.; OLIVEIRA, A. C. B. de; PEREIRA, A. A.; SAKIYAMA, N. S.; RESENDE JÚNIOR, M. F. R. de; ZAMBOLIM, L. |
|
Afiliação: |
TIAGO VIEIRA SOUSA, BIOAGRO/Biocafé/UFV; EVELINE TEIXEIRA CAIXETA, SAPC; EMILLY RUAS ALKIMIM, BIOAGRO/Biocafé/UFV; ANTONIO CARLOS BAIAO DE OLIVEIRA, SAPC; ANTONIO ALVES PEREIRA, EPAMIG; NEY SUSSUMU SAKIYAMA, UFV; MARCIO FERNANDO RIBEIRO DE RESENDE JÚNIOR, Horticultural Sciences Department/University of Florida; LAÉRCIO ZAMBOLIM, DF/UFV. |
|
Título: |
Population structure and genetic diversity of coffee progenies derived from Catuaí and Híbrido de Timor revealed by genome-wide SNP marker. |
|
Ano de publicação: |
2017 |
|
Fonte/Imprenta: |
Tree Genetics & Genomes, v. 13, n. 6, Dec. 2017. |
|
Idioma: |
Inglês |
|
Conteúdo: |
The use of single nucleotide polymorphism (SNP) molecular markers has provided advances in selection methodologies used in breeding programs of different crops, reducing cost and time of cultivar release. Despite the great economic and social importance of Coffea arabica, studies with SNP markers are scarce and a small number of SNP are available for this species, when compared with other crops of agronomic mportance. Thus, the objective of this study was to identify and validate SNP molecular markers for the species Coffea arabica and to introduce these markers to genetic breeding by means of an accurate analysis of the diversity and genetic structure of breeding populations of this species. After quality filtering, 11,187 SNP markers were selected from the coffee population obtained from crosses between the genotypes Catuaí and Híbrido de Timor. A great number of markers were distributed in the 11 chromosomes, within transcribed regions, and were used to estimate the genetic dissimilarity among the individuals of the breeding population. Dendrogram analysis and a Bayesian approach demonstrated the formation of two groups and the discrimination of all genotypes evaluated. The expressive number of SNP molecular markers distributed throughout C. arabica genome was efficient to discriminate all the accessions evaluated in the experiment, clustering them according to their genealogies. This work identified mixtures within the progenies. The genotyping data also provided detailed information about the parental genotypes and led to the identification of new candidate parents to be introduced to the breeding program. The study discussed population structure and its consequence in obtaining improved varieties of C. arabica. MenosThe use of single nucleotide polymorphism (SNP) molecular markers has provided advances in selection methodologies used in breeding programs of different crops, reducing cost and time of cultivar release. Despite the great economic and social importance of Coffea arabica, studies with SNP markers are scarce and a small number of SNP are available for this species, when compared with other crops of agronomic mportance. Thus, the objective of this study was to identify and validate SNP molecular markers for the species Coffea arabica and to introduce these markers to genetic breeding by means of an accurate analysis of the diversity and genetic structure of breeding populations of this species. After quality filtering, 11,187 SNP markers were selected from the coffee population obtained from crosses between the genotypes Catuaí and Híbrido de Timor. A great number of markers were distributed in the 11 chromosomes, within transcribed regions, and were used to estimate the genetic dissimilarity among the individuals of the breeding population. Dendrogram analysis and a Bayesian approach demonstrated the formation of two groups and the discrimination of all genotypes evaluated. The expressive number of SNP molecular markers distributed throughout C. arabica genome was efficient to discriminate all the accessions evaluated in the experiment, clustering them according to their genealogies. This work identified mixtures within the progenies. The genotyping data also provided detaile... Mostrar Tudo |
|
Palavras-Chave: |
Molecular breeding; Next-generation sequence. |
|
Thesagro: |
Coffea arabica. |
|
Thesaurus Nal: |
Genetic relationships; Introgression; Teachers. |
|
Categoria do assunto: |
-- |
|
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/168492/1/Population-structure-and-genetic-diversity.pdf
|
|
Marc: |
LEADER 02620naa a2200277 a 4500
001 2081931
005 2017-12-15
008 2017 bl uuuu u00u1 u #d
100 1 $aSOUSA, T. V.
245 $aPopulation structure and genetic diversity of coffee progenies derived from Catuaí and Híbrido de Timor revealed by genome-wide SNP marker.$h[electronic resource]
260 $c2017
520 $aThe use of single nucleotide polymorphism (SNP) molecular markers has provided advances in selection methodologies used in breeding programs of different crops, reducing cost and time of cultivar release. Despite the great economic and social importance of Coffea arabica, studies with SNP markers are scarce and a small number of SNP are available for this species, when compared with other crops of agronomic mportance. Thus, the objective of this study was to identify and validate SNP molecular markers for the species Coffea arabica and to introduce these markers to genetic breeding by means of an accurate analysis of the diversity and genetic structure of breeding populations of this species. After quality filtering, 11,187 SNP markers were selected from the coffee population obtained from crosses between the genotypes Catuaí and Híbrido de Timor. A great number of markers were distributed in the 11 chromosomes, within transcribed regions, and were used to estimate the genetic dissimilarity among the individuals of the breeding population. Dendrogram analysis and a Bayesian approach demonstrated the formation of two groups and the discrimination of all genotypes evaluated. The expressive number of SNP molecular markers distributed throughout C. arabica genome was efficient to discriminate all the accessions evaluated in the experiment, clustering them according to their genealogies. This work identified mixtures within the progenies. The genotyping data also provided detailed information about the parental genotypes and led to the identification of new candidate parents to be introduced to the breeding program. The study discussed population structure and its consequence in obtaining improved varieties of C. arabica.
650 $aGenetic relationships
650 $aIntrogression
650 $aTeachers
650 $aCoffea arabica
653 $aMolecular breeding
653 $aNext-generation sequence
700 1 $aCAIXETA, E. T.
700 1 $aALKIMIM, E. R.
700 1 $aOLIVEIRA, A. C. B. de
700 1 $aPEREIRA, A. A.
700 1 $aSAKIYAMA, N. S.
700 1 $aRESENDE JÚNIOR, M. F. R. de
700 1 $aZAMBOLIM, L.
773 $tTree Genetics & Genomes$gv. 13, n. 6, Dec. 2017.
Download
Esconder MarcMostrar Marc Completo |
|
Registro original: |
Embrapa Café (CNPCa) |
|
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
URL |
Voltar
|
|
|
 | Acesso ao texto completo restrito à biblioteca da Embrapa Suínos e Aves. Para informações adicionais entre em contato com cnpsa.biblioteca@embrapa.br. |
Registro Completo
|
Biblioteca(s): |
Embrapa Suínos e Aves. |
|
Data corrente: |
24/09/2008 |
|
Data da última atualização: |
24/09/2008 |
|
Tipo da produção científica: |
Artigo em Anais de Congresso / Nota Técnica |
|
Autoria: |
SILVA, E. G. da; LUDKE, M. do C. M. M.; LUDKE, J. V.; BERTOL, T. M.; DUTRA JUNIOR, W. M.; NASCIMENTO, G. R. do; AQUINO, R. S. de; SANTANA, J. C. N. de. |
|
Afiliação: |
Edmilson Gomes da Silva, Universidade Federal Rural de Pernambuco; Maria do Carmo Mohaupt Marques Ludke, Universidade Federal Rural de Pernambuco; Jorge Vitor Ludke, Embrapa Suínos e Aves; Teresinha Marisa Bertol, Embrapa Suínos e Aves; Wilson Moreira Dutra Júnior, Universidade Federal Rural de Pernambuco; Guilherme Rodrigues do Nascimento, Universidade Federal Rural de Pernambuco; Rafael Santos de Aquino, UFRPE; Juliana Cláudia Neves de Santana, Universidade Federal Rural de Pernambuco. |
|
Título: |
Determinação da composição nutricional, energia metabolizável e balanço da matéria seca do soro de queijo coalho em suínos. |
|
Ano de publicação: |
2008 |
|
Fonte/Imprenta: |
In: CONGRESSO BRASILEIRO DE ZOOTECNIA, 18; CONGRESSO INTERNACIONAL DE ZOOTECNIA, 10., 2008, João Pessoa, PB. Anais. João Pessoa: UFPB: ABZ, 2008. |
|
Páginas: |
4 p. |
|
Idioma: |
Português |
|
Notas: |
Projeto/Plano de Ação: 16.00.30004-00. |
|
Palavras-Chave: |
Alimentos; Avaliação. |
|
Thesagro: |
Digestibilidade; Metabolismo; Suinocultura. |
|
Categoria do assunto: |
-- |
|
Marc: |
LEADER 00948naa a2200277 a 4500
001 1444024
005 2008-09-24
008 2008 bl --- 0-- u #d
100 1 $aSILVA, E. G. da
245 $aDeterminação da composição nutricional, energia metabolizável e balanço da matéria seca do soro de queijo coalho em suínos.
260 $c2008
300 $a4 p.
500 $aProjeto/Plano de Ação: 16.00.30004-00.
650 $aDigestibilidade
650 $aMetabolismo
650 $aSuinocultura
653 $aAlimentos
653 $aAvaliação
700 1 $aLUDKE, M. do C. M. M.
700 1 $aLUDKE, J. V.
700 1 $aBERTOL, T. M.
700 1 $aDUTRA JUNIOR, W. M.
700 1 $aNASCIMENTO, G. R. do
700 1 $aAQUINO, R. S. de
700 1 $aSANTANA, J. C. N. de
773 $tIn: CONGRESSO BRASILEIRO DE ZOOTECNIA, 18; CONGRESSO INTERNACIONAL DE ZOOTECNIA, 10., 2008, João Pessoa, PB. Anais. João Pessoa: UFPB: ABZ, 2008.
Download
Esconder MarcMostrar Marc Completo |
|
Registro original: |
Embrapa Suínos e Aves (CNPSA) |
|
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
Fechar
|
| Expressão de busca inválida. Verifique!!! |
|
|
