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 | Acesso ao texto completo restrito à biblioteca da Embrapa Mandioca e Fruticultura. Para informações adicionais entre em contato com cnpmf.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Agricultura Digital; Embrapa Mandioca e Fruticultura. |
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Data corrente: |
30/09/2019 |
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Data da última atualização: |
24/10/2019 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
SOUSA, E. M. R.; SUZART, C.; COSTA, S. N.; COSTA, M. G. C.; ALMEIDA, A. A. F. de; COELHO FILHO, M. A.; SILVA, F. R. da; SOARES FILHO, W. dos S.; MICHELI, F.; GESTEIRA, A. da S. |
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Afiliação: |
ELIANA MARIA ROCHA SOUSA, UESC; CAIO SUZART, UESC; SHIRLEY NASCIMENTO COSTA, UESC; MARCIO GILBERTO CARDOSO COSTA, UESC; ALEX-ALAN FURTADO DE ALMEIDA, UESC; MAURICIO ANTONIO COELHO FILHO, CNPMF; FELIPE RODRIGUES DA SILVA, CNPTIA; WALTER DOS SANTOS SOARES FILHO, CNPMF; FABIENNE MICHELI, UESC, CIRAD -UMR AGAP; ABELMON DA SILVA GESTEIRA, UESC, CNPMF. |
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Título: |
Transcriptomic analysis related to the flowering of the citrus hybrid Microcitrangemonia. |
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Ano de publicação: |
2019 |
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Fonte/Imprenta: |
Current Plant Biology, v. 18, p. 1-9, May 2019. |
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DOI: |
https://doi.org/10.1016/j.cpb.2018.12.003 |
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Idioma: |
Inglês |
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Notas: |
Article number: 100097. |
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Conteúdo: |
ABSTRACT. Flowering in citrus plants grown from seeds occurs between four to ten years; therefore, the reduction of the juvenile period is a challenge for the genetic improvement of citrus. However, the Embrapa Mandioca e Fruticultura created a hybrid called Microcitrangemonia [Lemon Tree 'Rangpur' (LCR) X Citrus 'Yuma' (CTYM) - 005) X Microcitrus papuana (MCP) - 011] which presents a short juvenile period (one year) and flowering in all seasons of the year. It has a rare genotype for citrus cultivation. Other varieties with similar characteristics are only transgenic. This work describes the genes expressed in flowering-related pathways in the citrus hybrid Microcitrangemonia, which shows early and constant flowering and compares the gene function of each pathway with the existing Arabidopsis thaliana homologues. We performed RNA extraction, RNA-sequence library construction and sequencing from leaves, reproductive buds and stems of the H011 plant. We identified floweringrelated transcripts and cladograms of similarity for the SOC1, AP1 and FLC proteins. Sequence annotation showed that most of the hits are similar to Citrus sinensis, 57%, and Citrus clementina, 38.9%. Different sequences similar to 29 proteins belonging to different flowering-related pathways have been identified, such as gibberellin, photoperiod, autonomous and vernalization. The analysis of similarity allowed inferring that H011 has greater evolutionary kinship with Citrus sinensis. The outcomes contribute to the understanding of the early and constant flowering of H011 as well as provide an important resource for breeding programs in citrus aimed at juvenile period reduction. MenosABSTRACT. Flowering in citrus plants grown from seeds occurs between four to ten years; therefore, the reduction of the juvenile period is a challenge for the genetic improvement of citrus. However, the Embrapa Mandioca e Fruticultura created a hybrid called Microcitrangemonia [Lemon Tree 'Rangpur' (LCR) X Citrus 'Yuma' (CTYM) - 005) X Microcitrus papuana (MCP) - 011] which presents a short juvenile period (one year) and flowering in all seasons of the year. It has a rare genotype for citrus cultivation. Other varieties with similar characteristics are only transgenic. This work describes the genes expressed in flowering-related pathways in the citrus hybrid Microcitrangemonia, which shows early and constant flowering and compares the gene function of each pathway with the existing Arabidopsis thaliana homologues. We performed RNA extraction, RNA-sequence library construction and sequencing from leaves, reproductive buds and stems of the H011 plant. We identified floweringrelated transcripts and cladograms of similarity for the SOC1, AP1 and FLC proteins. Sequence annotation showed that most of the hits are similar to Citrus sinensis, 57%, and Citrus clementina, 38.9%. Different sequences similar to 29 proteins belonging to different flowering-related pathways have been identified, such as gibberellin, photoperiod, autonomous and vernalization. The analysis of similarity allowed inferring that H011 has greater evolutionary kinship with Citrus sinensis. The outcomes contribut... Mostrar Tudo |
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Palavras-Chave: |
Citrus spp; Melhoramento genético de citros; Microcitrangemonia; Precocius molecular reproduction. |
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Thesagro: |
Fruta Cítrica. |
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Thesaurus Nal: |
Genetic improvement. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 02685naa a2200325 a 4500
001 2112595
005 2019-10-24
008 2019 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1016/j.cpb.2018.12.003$2DOI
100 1 $aSOUSA, E. M. R.
245 $aTranscriptomic analysis related to the flowering of the citrus hybrid Microcitrangemonia.$h[electronic resource]
260 $c2019
500 $aArticle number: 100097.
520 $aABSTRACT. Flowering in citrus plants grown from seeds occurs between four to ten years; therefore, the reduction of the juvenile period is a challenge for the genetic improvement of citrus. However, the Embrapa Mandioca e Fruticultura created a hybrid called Microcitrangemonia [Lemon Tree 'Rangpur' (LCR) X Citrus 'Yuma' (CTYM) - 005) X Microcitrus papuana (MCP) - 011] which presents a short juvenile period (one year) and flowering in all seasons of the year. It has a rare genotype for citrus cultivation. Other varieties with similar characteristics are only transgenic. This work describes the genes expressed in flowering-related pathways in the citrus hybrid Microcitrangemonia, which shows early and constant flowering and compares the gene function of each pathway with the existing Arabidopsis thaliana homologues. We performed RNA extraction, RNA-sequence library construction and sequencing from leaves, reproductive buds and stems of the H011 plant. We identified floweringrelated transcripts and cladograms of similarity for the SOC1, AP1 and FLC proteins. Sequence annotation showed that most of the hits are similar to Citrus sinensis, 57%, and Citrus clementina, 38.9%. Different sequences similar to 29 proteins belonging to different flowering-related pathways have been identified, such as gibberellin, photoperiod, autonomous and vernalization. The analysis of similarity allowed inferring that H011 has greater evolutionary kinship with Citrus sinensis. The outcomes contribute to the understanding of the early and constant flowering of H011 as well as provide an important resource for breeding programs in citrus aimed at juvenile period reduction.
650 $aGenetic improvement
650 $aFruta Cítrica
653 $aCitrus spp
653 $aMelhoramento genético de citros
653 $aMicrocitrangemonia
653 $aPrecocius molecular reproduction
700 1 $aSUZART, C.
700 1 $aCOSTA, S. N.
700 1 $aCOSTA, M. G. C.
700 1 $aALMEIDA, A. A. F. de
700 1 $aCOELHO FILHO, M. A.
700 1 $aSILVA, F. R. da
700 1 $aSOARES FILHO, W. dos S.
700 1 $aMICHELI, F.
700 1 $aGESTEIRA, A. da S.
773 $tCurrent Plant Biology$gv. 18, p. 1-9, May 2019.
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Registro original: |
Embrapa Agricultura Digital (CNPTIA) |
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| Registros recuperados : 14 | |
| 1. |  | ZAHN, E.; DIAS, N. L.; ARAUJO, A.; SÁ, L. D. A.; SÖRGEL, M.; TREBS, I.; WOLFF, S.; MANZI, A. Scalar turbulent behavior in the roughness sublayer of an Amazonian forest. Atmospheric Chemistry and Physics, v. 16, p. 11349-11366, 2016.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 3. | | CAVA, D.; MORTARINI, L.; DIAS JÚNIOR, C. Q.; BRONDANI, D.; ACEVEDO, O.; OLIVEIRA, P.; GIOSTRA, U.; MANZI, A. O.; ARAUJO, A. C. de; TSOKANKUNKU, A.; SÖRGEL, M. Impact of Atmospheric Stability on Vertical Propagation of Submeso and Coherent Structure in a Dense Amazon Forest. In: EGU GENERAL ASSEMBLY, 2022, Viena. Programme. [S.l.]: EGU, 2022.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 4. | | CHOR, T. L.; DIAS, N. L.; ARAUJO, A. C. de; WOLFF, S.; ZAHN, E.; MANZI, A.; TREBS, I.; SÁ, M. O.; TEIXEIRA, P. R.; SÖRGEL, M. Flux-variance and flux-gradient relationships in the roughnesssublayer over the Amazon forest. Agricultural and Forest Meteorology, v. 239, p. 213-222, May 2017.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
|  |
| 5. | | MAFRA, A. C. B.; ARAUJO, A. C. de; SÁ, L. D. de A.; SANTOS, R. M. N. dos; TREBS, I.; SÖRGEL, M. Variabilidade da concentração média de CO2 acima da floresta Amazônica durante a noite associada a distintos regimes turbulentos. Ciência e Natura, Santa Maria, v. 38, n. 1, p. 429-433, jan./abr. 2016.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 2 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 6. | | OLVEIRA, P. E. S.; ACEVEDO, O. C.; SÖRGEL, M.; TSOKANKUNKU, A.; WOLFF, S.; ARAUJO, A. C. de; SOUZA, R. A. F.; SÁ, M. O.; MANZI, A. O.; ANDREAE, M. O. Nighttime wind and scalar variability within and above an Amazonian canopy. Atmospheric Chemistry and Physics, v. 18, n. 5, p. 3083-3099, 2018.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 7. | | SERRA-NETO, E. M.; MARTINS, H. S.; DIAS-JUNIOR, C. Q.; SANTANA, R. A.; BRONDANI, D. V.; MANZI, A. O.; ARAUJO, A. C. de; TEIXEIRA, P. R.; SÖRGEL, M.; MORTARINI, L. Simulation of the scalar transport above and within the Amazon Forest Canopy. Atmosphere, v. 12, n. 12, Article 1631, 2021.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
| |
| 8. | | KOMIYA, S.; ARAUJO, A. C. de; LAVRIC, J. V.; NELSON, B.; SÖRGEL, M.; WEBER, B.; BOTIA, S.; GOMES-ALVES, E.; WALTER, D.; SÁ, M. de O.; WOLFF, S.; PINHO, D. M.; KONDO, F.; TRUMBORE, S. Seasonal and interannual variations of carbon fluxes at the Amazon Tall Tower Observatory site in 2014-2019. In: EGU GENERAL ASSEMBLY, 2022, Viena. Programme. [S.l.]: EGU, 2022.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 9. | | PFANNERSTILL, E. Y.; REIJRINK, N. G.; EDTBAUER, A.; RINGSDORF, A.; ZANNONI, N.; ARAUJO, A. C. de; DITAS, F.; HOLANDA, B. A.; SÁ, M. O.; TSOKANKUNKU, A.; WALTER, D.; WOLFF, S.; LAVRIC, J. V.; PÖHLKER, C.; SÖRGEL, M.; WILLIAMS, J. Total OH reactivity over the Amazon rainforest: variability with temperature, wind, rain, altitude, time of day, season, and an overall budget closure. Atmospheric Chemistry and Physics, v. 21, n. 8, p. 6231-6256, 2021.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 10. | | MORTARINI, L.; DIAS-JÚNIOR, C. Q.; ACEVEDO, O.; OLIVEIRA, P. E. S.; TSOKANKUNKU, A.; SÖRGEL. M.; MANZI, A. O.; ARAUJO, A. C. de; BRONDANI, D. V.; TORO, I. M. C.; GIOSTRA, U.; CAVA, D. Vertical propagation of submeso and coherent structure in a tall and dense amazon forest in different stability conditions. PART II: Coherent structures analysis. Agricultural and Forest Meteorology, v. 322, 108993, July 2022.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 11. | | CORRÊA, P. B.; DIAS-JÚNIOR, C. Q.; CAVA, D.; SÖRGEL, M.; BOTÍA, S.; ACEVEDO, O.; OLIVEIRA, P. E. S.; MANZI, A. O.; MACHADO, L. A. T.; MARTINS, H. dos S.; TSOKANKUNKU, A.; ARAUJO, A. C. de; LAVRIC, J. V.; WALTER, D.; MORTARINI, L. A case study of a gravity wave induced by Amazon forest orography and low level jet generation. Agricultural and Forest Meteorology, v. 307, Article 108457, 2021.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 12. | | PFANNERSTILL, E. Y.; NÖLSCHER, A. C.; YÁÑEZ-SERRANO, A. M.; BOURTSOUKIDIS, E.; KEBEL, S.; JANSSEN, R. H. H.; TSOKANKUNKU, A.; WOLFF, S.; SÖRGEL, M.; SÁ, M. O.; ARAUJO, A. C. de; WALTER, D.; LAVRIC, J.; DIAS-JUNIOR, C. Q.; KESSELMEIER, J.; WILLIAMS, J. Total OH reactivity changes over the Amazon rainforest during an El Niño event. Frontiers in Forests and Global Change, v. 1, Article 12, Dec. 2018.| Tipo: Artigo em Periódico Indexado |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 13. | | ANDREAE, M. O.; ACEVEDO, O. C.; ARAUJO, A.; ARTAXO, P.; BARBOSA, C. G. G.; BARBOSA, H. M. J.; BRITO, J.; CARBONE, S.; CHI, X.; CINTRA, B. B. L.; SILVA, N. F. da; DIAS, N. L.; DIAS-JÚNIOR, C. Q.; DITAS, F.; DITZ, R.; GODOI, A. F. L.; GODOI, R. H. M.; HEIMANN, M.; HOFFMANN, T.; KESSELMEIER, J.; KÖNEMANN, T.; KRÜGER, M. L.; LAVRIC, J. V.; MANZI, A. O.; MORAN-ZULOAGA, D.; NÖLSCHER, A. C.; NOGUEIRA, D. S.; PIEDADE, M. T. F.; PÖHLKER, C.; PÖSCHL, U.; RIZZO, L. V.; RO, C.-U.; RUCKTESCHLER, N.; SÁ, L. D. A.; SÁ, M. D. O.; SALES, C. B.; SANTOS, R. M. N. dos; SATURNO, J.; SCHÖNGART, J.; SÖRGEL, M.; SOUZA, C. M. de; SOUZA, R. A. F. de; SU, H.; TARGHETTA, N.; TÓTA, J.; TREBS, I.; TRUMBORE, S.; EIJCK, A. van; WALTER, D.; WANG, Z.; WEBER, B.; WILLIAMS, J.; WINDERLICH, J.; WITTMANN, F.; WOLFF, S.; YÁÑEZ-SERRANO, A. M. The Amazon Tall Tower Observatory (ATTO) in the remote Amazon basin: overview of first results from ecosystem ecology, meteorology, trace gas, and aerosol measurements. Atmospheric Chemistry and Physics Discuss, v. 15, n. 18, p. 11599-11726, 2015.| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 14. | | ANDREAE, M. O.; ACEVEDO, O. C.; ARAUJO, A.; ARTAXO, P.; BARBOSA, C. G. G.; BARBOSA, H. M. J.; BRITO, J.; CARBONE, S.; CHI, X.; CINTRA, B. B. L.; SILVA, N. F. da; DIAS, N. L.; DIAS-JÚNIOR, C. Q.; DITAS, F.; DITZ, R.; GODOI, A. F. L.; GODOI, R. H. M.; HEIMANN, M.; HOFFMANN, T.; KESSELMEIER, J.; KÖNEMANN, T.; KRÜGER, M. L.; LAVRIC, J. V.; MANZI, A. O.; LOPES, A. P.; MARTINS, D. L.; MIKHAILOV, E. F.; MORAN-ZULOAGA, D.; NELSON, B. W.; NÖLSCHER, A. C.; NOGUEIRA, D. S.; PIEDADE, M. T. F.; PÖHLKER, C.; PÖSCHL, U.; QUESADA, C. A.; RIZZO, L. V.; RO, C.-U.; RUCKTESCHLER, N.; SÁ, L. D. A.; SÁ, M. de O.; SALES, C. B.; SANTOS, R. M. N. dos; SATURNO, J.; SCHÖNGART, J.; SÖRGEL, M.; SOUZA, C. M. de; SOUZA, R. A. F. de; SU, H.; TARGHETTA, N.; TÓTA, J.; TREBS, I.; TRUMBORE, S.; EIJCK, A. van; WALTER, D.; WANG, Z.; WEBER, B.; WILLIAMS, J.; WINDERLICH, J.; WITTMANN, F.; WOLFF, S.; YÁÑEZ-SERRANO, A. M. The Amazon Tall Tower Observatory (ATTO): overview of pilot measurements on ecosystem ecology, meteorology, trace gases, and aerosols. Atmospheric Chemistry and Physics, v. 15, n. 18, p. 10723-10776, 2015.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| Registros recuperados : 14 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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