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Registros recuperados : 33 | |
3. | | MACÊDO, J. K. A.; RODRIGUES NETO, J. C.; BARROS, J. S.; JUNGMANN, L.; ABDELNUR, P. V. Comparative protein analysis of oil palm mesocarp from Elaeis guineenses and Elaeis oleifera to investigate acidification process. In: ASMS CONFERENCE ON MASS SPECTOMETRY AND ALLIED TOPICS, 64., 2016, San Antonio, Texas. [Anais ...]. Santa Fe: ASMS, 2016. Não paginado. 1 Poster. Biblioteca(s): Embrapa Agroenergia. |
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4. | | RODRIGUES NETO, J. C.; TEIXEIRA, T. S.; COSTA, P. P. K. G.; ABDELNUR, P. V. Desenvolvimento de protocolo de aplicação de matriz em folha de dendê para imagem química por MALDI-MS. In: ENCONTRO DE PESQUISA E INOVAÇÃO DA EMBRAPA AGROENERGIA, 5., 2018, Brasília, DF. Anais ... Brasília, DF: Embrapa Agroenergia, 2018. p. 59. Biblioteca(s): Embrapa Agroenergia. |
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7. | | TEIXEIRA, T. S.; RODRIGUES NETO, J. C.; CONCEIÇÃO, A. A.; SIQUEIRA, F. G. de; ABDELNUR, P. V. Interações fúngicas observadas através de imagem química por espectrometria de massas. In: ENCONTRO DE PESQUISA E INOVAÇÃO DA EMBRAPA AGROENERGIA, 6., 2020, Brasília, DF. Anais... Brasília, DF: Embrapa, 2020. p. 159-164 il. Biblioteca(s): Embrapa Agroenergia. |
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8. | | SOUZA, M. de A.; GUIMARÃES, M. B.; RODRIGUES NETO, J. C.; MENDONCA, S.; SIQUEIRA, F. G. de; ABDELNUR, P. V. Metabolômica de Schizophyllum commune cultivados em torta do caroço de algodão por espectrometria de massas. In: ENCONTRO DE PESQUISA E INOVAÇÃO DA EMBRAPA AGROENERGIA, 6., 2020, Brasília, DF. Anais... Brasília, DF: Embrapa, 2020. p. 49-56 il. Biblioteca(s): Embrapa Agroenergia. |
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9. | | TEIXEIRA, T. S.; RODRIGUES NETO, J. C.; SILVA, E. A.; CONCEIÇÃO, A. A.; SIQUEIRA, F. G. de; ABDELNUR, P. V. Mass spectrometry imaging for fungal interaction analysis: Classic versus imprinting methods. Brazilian Journal of Analytical Chemistry, v. 10, n. 38, p. 71-78, 2023. Biblioteca(s): Embrapa Agroenergia. |
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10. | | RODRIGUES NETO, J. C.; SILVA, M. E. R. da; COSTA, P. P. K. G.; RODRIGUES, C. M.; ABDELNUR, P. V. Desenvolvimento de protocolo analítico para folhas de dendê utilizando imagem química por MALDI-MS. In: WORKSHOP DA PÓS-GRADUAÇÃO EM QUÍMICA, 1., 2015, Goiânia, GO. [Resumos ...] Goiânia: UFG, 2015. WSPGQ-032 Biblioteca(s): Embrapa Agroenergia. |
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11. | | SOUTO, A. L.; RODRIGUES-NETO, J. C.; RIBEIRO, J. A. de A.; RODRIGUES, C. M.; ABDELNUR, P. V. Identificação de marcadores químicos do amarelecimento fatal em Elaeis guineensis por UHPLC-MS e PCA. In: REUNIÃO ANUAL DA SOCIEDADE BRASILEIRA DE QUÍMICA, 39., 2016, Goiânia, GO. Criar e empreender: anais ... São Paulo: SBQ, 2016. Não paginado. Biblioteca(s): Embrapa Agroenergia. |
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12. | | TEIXEIRA, T. S.; RODRIGUES NETO, J. C.; CONCEIÇÃO, A. A.; COSTA, P. P. K. G.; SIQUEIRA, F. G. de; ABDELNUR, P. V. Analysis of fungal co-culture metabolites using both classic and imprinting Mass Spectrometry Imaging. In: IBEROAMERICAN CONFERENCE ON MASS SPECTROMETRY, 3., 2022, Rio de Janeiro. Book of abstracts. [S/l]: Sociedade Brasileira de Espectrometria de Massas, 2022. p. 391-392 Biblioteca(s): Embrapa Agroenergia. |
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13. | | RODRIGUES NETO, J. C.; CORREIA, M. V.; SOUTO, A. L.; RIBEIRO, J. A. de A.; RODRIGUES, C. M.; ABDELNUR, P. V. Metabolic biomarkers discovery of fatal yellowing on Elaeis guineensis leaves using metabolomics approach. In: IBERO-AMERICAN, 1.; BrMASS CONFERENCE ON MASS SPECTROMETRY, 6., 2016, Rio de Janeiro. Resumos Eletrônicos... São Paulo: Sociedade Brasileira de Espectrometria de Massas, 2016. p. 229-230. Biblioteca(s): Embrapa Agroenergia. |
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15. | | RODRIGUES-NETO, J. C.; CORREIA, M. V.; SOUTO, A. L.; RIBEIRO, J. A. de A.; VIEIRA, L. R.; SOUZA JUNIOR, M. T.; RODRIGUES, C. M.; ABDELNUR, P. V. Metabolic fingerprinting analysis of oil palm reveals a set of differentially expressed metabolites in fatal yellowing symptomatic and non-symptomatic plants. Metabolomics, v. 14, n. 142, 2018. Biblioteca(s): Embrapa Agroenergia. |
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16. | | SOUZA, M. A.; GUIMARÃES, M. B.; RIBEIRO, J. A. de A.; RODRIGUES NETO, J. C.; MENDONCA, S.; SIQUEIRA, F. G. de; ABDELNUR, P. V. Metabolômica untargeted por UHPLC-MS em processos pré-tratamento biológico de torta de pinhão manso por macrobasidiomicetos. In: ENCONTRO DE PESQUISA E INOVAÇÃO DA EMBRAPA AGROENERGIA, 5., 2018, Brasília, DF. Anais ... Brasília, DF: Embrapa Agroenergia, 2018. p. 15 Biblioteca(s): Embrapa Agroenergia. |
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17. | | FREITAS, S. V. de; SOUZA, F. R. de; RODRIGUES NETO, J. C.; VASCONCELOS, G. A.; ABDELNUR, P. V.; VAZ, B. G.; HENRY, C. S.; COLTRO, W. K. T. Uncovering the formation of color gradients for glucose colorimetric assays on microfluidic paper-based analytical devices by mass spectrometry imaging. Analytical Chemistry, v. 90, n. 20, p. 11949-11954, 2018. Biblioteca(s): Embrapa Agroenergia. |
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18. | | RODRIGUES NETO, J. C.; CORREIA, M. V.; SOUTO, A. L.; RIBEIRO, J. A. de A.; RODRIGUES, C. M.; ABDELNUR, P. V. Validation of a PLS-DA Model for biomarker discovery in Elaeis guineensis leaves related to fatal yellowing using UHPLC-MS/MS analysis. In: WORLD CHEMISTRY CONGRESS, 46.,; REUNIÃO ANNUAL DA SOCIEDADE BRASILEIRA DE QUÍMICA, 40., 2017, São Paulo, SP. [Resumos ...]. São Paulo: SBQ, 2017. Não paginado. Biblioteca(s): Embrapa Agroenergia. |
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19. | | BITTENCOURT, C. B.; SILVA, T. L. C. da; RODRIGUES NETO, J. C.; VIEIRA, L. R.; LEAO, A. P.; RIBEIRO, J. A. de A.; ABDELNUR, P. V.; SOUSA, C. A. F. de; SOUZA JUNIOR, M. T. Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part One?Salinity. Plants, 11, n. 1755, 2022. Biblioteca(s): Embrapa Agroenergia; Embrapa Meio-Norte. |
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20. | | LEAO, A. P.; BITTENCOURT, C. B.; SILVA, T. L. C. da; RODRIGUES NETO, J. C.; BRAGA, I. de O.; VIEIRA, L. R.; RIBEIRO, J. A. de A.; SOUSA, C. A. F. de; ABDELNUR, P. V.; SOUZA JUNIOR, M. T. Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part Two - Drought. Plants, 11, n. 2786, 2022. Biblioteca(s): Embrapa Agroenergia. |
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Registros recuperados : 33 | |
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Registro Completo
Biblioteca(s): |
Embrapa Agroenergia; Embrapa Meio-Norte. |
Data corrente: |
26/01/2022 |
Data da última atualização: |
21/02/2022 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Circulação/Nível: |
A - 2 |
Autoria: |
SILVA, T. L. C. da; SILVA, V. N. B.; BRAGA, I. de O.; RODRIGUES NETO, J. C.; LEAO, A. P.; RIBEIRO, J. A. de A.; VALADARES, L. F.; ABDELNUR, P. V.; SOUSA, C. A. F. de; SOUZA JUNIOR, M. T. |
Afiliação: |
THALLITON LUIZ CARVALHO DA SILVA, Programa de Pós-Graduação em Biotecnologia Vegetal, Universidade Federal de Lavras, MG, Brasil.; VIVIANNY NAYSE BELO SILVA, Programa de Pós-Graduação em Biotecnologia Vegetal, Universidade Federal de Lavras, MG, Brasil.; ÍTALO DE OLIVEIRA BRAGA, Programa de Pós-Graduação em Biotecnologia Vegetal, Universidade Federal de Lavras, MG, Brasil.; JORGE CANDIDO RODRIGUES NETO, Instituto de Química, Universidade Federal de Goiás, Goiânia, GO, Brasil.; ANDRE PEREIRA LEAO, CNPAE; JOSE ANTONIO DE AQUINO RIBEIRO, CNPAE; LEONARDO FONSECA VALADARES, CNPAE; PATRICIA VERARDI ABDELNUR, CNPAE; CARLOS ANTONIO FERREIRA DE SOUSA, CPAMN; MANOEL TEIXEIRA SOUZA JUNIOR, CNPAE. |
Título: |
Integration of metabolomics and transcriptomics data to further characterize Gliricidia sepium (Jacq.) Kunth under high salinity stress. |
Ano de publicação: |
2021 |
Fonte/Imprenta: |
Plant Genome, e20182, 2021. |
Idioma: |
Inglês |
Conteúdo: |
Soil salinity is one abiotic stress that threatens agriculture in more than 100 countries. Gliricidia [Gliricidia sepium (Jacq.) Kunth] is a multipurpose tree known for its ability to adapt to a wide range of soils; however, its tolerance limits and responses to salt stress are not yet well understood. In this study, after characterizing the morphophysiological responses of young gliricidia plants to salinity stress, leaf metabolic and transcription profiles were generated and submitted to single and integrated analyses. RNA from leaf samples were subjected to RNA sequencing using an Illumina HiSeq platform and the paired-end strategy. Polar and lipidic fractions from leaf samples were extracted and analyzed on an ultra-high-performance liquid chromatography (UHPLC) coupled with electrospray ionization quadrupole time-offlight high-resolution mass spectrometry (MS) system. Acquired data were analyzed using the OmicsBox, XCMS Online, MetaboAnalyst, and Omics Fusion platforms. The substrate salinization protocol used allowed the identification of two distinct responses to salt stress: tolerance and adaptation. Single analysis on transcriptome and metabolome data sets led to a group of 5,672 transcripts and 107 metabolites differentially expressed in gliricidia leaves under salt stress. The phenylpropanoid biosynthesis was the most affected pathway, with 15 metabolites and three genes differentially expressed. Results showed that the differentially expressed metabolites and genes from this pathway affect mainly short-term salt stress (STS). The single analysis of the transcriptome identified 12 genes coding for proteins that might play a role in gliricidia response at both STS and long-termsalt stress (LTS). Further studies are needed to reveal the mechanisms behind the adaptation response. MenosSoil salinity is one abiotic stress that threatens agriculture in more than 100 countries. Gliricidia [Gliricidia sepium (Jacq.) Kunth] is a multipurpose tree known for its ability to adapt to a wide range of soils; however, its tolerance limits and responses to salt stress are not yet well understood. In this study, after characterizing the morphophysiological responses of young gliricidia plants to salinity stress, leaf metabolic and transcription profiles were generated and submitted to single and integrated analyses. RNA from leaf samples were subjected to RNA sequencing using an Illumina HiSeq platform and the paired-end strategy. Polar and lipidic fractions from leaf samples were extracted and analyzed on an ultra-high-performance liquid chromatography (UHPLC) coupled with electrospray ionization quadrupole time-offlight high-resolution mass spectrometry (MS) system. Acquired data were analyzed using the OmicsBox, XCMS Online, MetaboAnalyst, and Omics Fusion platforms. The substrate salinization protocol used allowed the identification of two distinct responses to salt stress: tolerance and adaptation. Single analysis on transcriptome and metabolome data sets led to a group of 5,672 transcripts and 107 metabolites differentially expressed in gliricidia leaves under salt stress. The phenylpropanoid biosynthesis was the most affected pathway, with 15 metabolites and three genes differentially expressed. Results showed that the differentially expressed metabolites and gen... Mostrar Tudo |
Palavras-Chave: |
Adaptation; Salinization protocol. |
Categoria do assunto: |
-- |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/230514/1/The-Plant-Genome-2022-Integration.pdf
|
Marc: |
LEADER 02601naa a2200253 a 4500 001 2139329 005 2022-02-21 008 2021 bl uuuu u00u1 u #d 100 1 $aSILVA, T. L. C. da 245 $aIntegration of metabolomics and transcriptomics data to further characterize Gliricidia sepium (Jacq.) Kunth under high salinity stress.$h[electronic resource] 260 $c2021 520 $aSoil salinity is one abiotic stress that threatens agriculture in more than 100 countries. Gliricidia [Gliricidia sepium (Jacq.) Kunth] is a multipurpose tree known for its ability to adapt to a wide range of soils; however, its tolerance limits and responses to salt stress are not yet well understood. In this study, after characterizing the morphophysiological responses of young gliricidia plants to salinity stress, leaf metabolic and transcription profiles were generated and submitted to single and integrated analyses. RNA from leaf samples were subjected to RNA sequencing using an Illumina HiSeq platform and the paired-end strategy. Polar and lipidic fractions from leaf samples were extracted and analyzed on an ultra-high-performance liquid chromatography (UHPLC) coupled with electrospray ionization quadrupole time-offlight high-resolution mass spectrometry (MS) system. Acquired data were analyzed using the OmicsBox, XCMS Online, MetaboAnalyst, and Omics Fusion platforms. The substrate salinization protocol used allowed the identification of two distinct responses to salt stress: tolerance and adaptation. Single analysis on transcriptome and metabolome data sets led to a group of 5,672 transcripts and 107 metabolites differentially expressed in gliricidia leaves under salt stress. The phenylpropanoid biosynthesis was the most affected pathway, with 15 metabolites and three genes differentially expressed. Results showed that the differentially expressed metabolites and genes from this pathway affect mainly short-term salt stress (STS). The single analysis of the transcriptome identified 12 genes coding for proteins that might play a role in gliricidia response at both STS and long-termsalt stress (LTS). Further studies are needed to reveal the mechanisms behind the adaptation response. 653 $aAdaptation 653 $aSalinization protocol 700 1 $aSILVA, V. N. B. 700 1 $aBRAGA, I. de O. 700 1 $aRODRIGUES NETO, J. C. 700 1 $aLEAO, A. P. 700 1 $aRIBEIRO, J. A. de A. 700 1 $aVALADARES, L. F. 700 1 $aABDELNUR, P. V. 700 1 $aSOUSA, C. A. F. de 700 1 $aSOUZA JUNIOR, M. T. 773 $tPlant Genome, e20182, 2021.
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