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4. | | MENDES, R.; GARBEVA, P.; RAAIJMAKERS, J. M. The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms. FEMS Microbiology Reviews, Bethesda, v. 37, n. 5, p. 634-663, 2013. Biblioteca(s): Embrapa Meio Ambiente. |
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18. | | VOORT, M. van der; KEMPENAAR, M.; DRIEL, M.; RAAIJMAKERS, J. M.; MENDES, R. Impact of soil heat on reassembly of bacterial communities in the rhizosphere microbiome and plant disease suppression. Ecology Letters, Oxford, v. 19, n. 4, p. 375-382, 2016. Biblioteca(s): Embrapa Meio Ambiente. |
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19. | | PÉREZ-JARAMILLO, J. E.; CARRION, V. J.; HOLLANDER, M. de; MENDES, R.; RAAIJMAKERS, J. M. The spermosphere effect: building up plant microbiome assembly. In: CONGRESS OF EUROPEAN MICROBIOLOGISTS - FEMS, 7., 2017, Valencia, Spain. Abstract Book... Valencia: Federation of European Microbiological Society (FEMS), 2017. Ref. FEMS7-2470. Biblioteca(s): Embrapa Meio Ambiente. |
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Registro Completo
Biblioteca(s): |
Embrapa Meio Ambiente. |
Data corrente: |
25/11/2019 |
Data da última atualização: |
25/11/2019 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Circulação/Nível: |
A - 1 |
Autoria: |
PEREZ-JARAMILLO, J. E.; HOLLANDER, M. de; RAMÍREZ, C. A.; MENDES, R.; RAAIJMAKERS, J. M.; CARRIÓN, V. J. |
Afiliação: |
JUAN ESTEBAN PEREZ-JARAMILLO, Netherlands Institute of Ecology; MATTIAS DE HOLLANDER, Netherlands Institute of Ecology; CAMILO ANDRES RAMIREZ, University of Antioquia; RODRIGO MENDES, CNPMA; JOS M RAAIJMAKERS, Netherlands Institute of Ecology; VICTOR J CARRION, Leiden University. |
Título: |
Deciphering rhizosphere microbiome assembly of wild and modern common bean (Phaseolus vulgaris) in native and agricultural soils from Colombia. |
Ano de publicação: |
2019 |
Fonte/Imprenta: |
Microbiome, v. 7, 2019. Article 114. |
DOI: |
https://doi.org/10.1186/s40168-019-0727-1 |
Idioma: |
Inglês |
Conteúdo: |
Abstract: Background: Modern crop varieties are typically cultivated in agriculturally well-managed soils far from the centers oforigin of their wild relatives. How this habitat expansion impacted plant microbiome assembly is not well understood. Results: Here, we investigated if the transition from a native to an agricultural soil affected rhizobacterial communityassembly of wild and modern common bean (Phaseolus vulgaris) and if this led to a depletion of rhizobacterialdiversity. The impact of the bean genotype on rhizobacterial assembly was more prominent in the agriculturalsoil than in the native soil. Although only 113 operational taxonomic units (OTUs) out of a total of 15,925 wereshared by all eight bean accessions grown in native and agricultural soils, this core microbiome represented a largefraction (25.9%) of all sequence reads. More OTUs were exclusively found in the rhizosphere of common bean in theagricultural soil as compared to the native soil and in the rhizosphere of modern bean accessions as compared to wildaccessions. Co-occurrence analyses further showed a reduction in complexity of the interactions in the beanrhizosphere microbiome in the agricultural soil as compared to the native soil. |
Palavras-Chave: |
Common bean; Core microbiome; Networks; Wild and modern accessions. |
Thesagro: |
Feijão; Rizosfera. |
Thesaurus NAL: |
domestication; Microbiome; Phaseolus; rhizosphere. |
Categoria do assunto: |
S Ciências Biológicas |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/205381/1/Mendes-Rhizosphere-Bean-2019.pdf
|
Marc: |
LEADER 02174naa a2200313 a 4500 001 2115028 005 2019-11-25 008 2019 bl uuuu u00u1 u #d 024 7 $ahttps://doi.org/10.1186/s40168-019-0727-1$2DOI 100 1 $aPEREZ-JARAMILLO, J. E. 245 $aDeciphering rhizosphere microbiome assembly of wild and modern common bean (Phaseolus vulgaris) in native and agricultural soils from Colombia.$h[electronic resource] 260 $c2019 520 $aAbstract: Background: Modern crop varieties are typically cultivated in agriculturally well-managed soils far from the centers oforigin of their wild relatives. How this habitat expansion impacted plant microbiome assembly is not well understood. Results: Here, we investigated if the transition from a native to an agricultural soil affected rhizobacterial communityassembly of wild and modern common bean (Phaseolus vulgaris) and if this led to a depletion of rhizobacterialdiversity. The impact of the bean genotype on rhizobacterial assembly was more prominent in the agriculturalsoil than in the native soil. Although only 113 operational taxonomic units (OTUs) out of a total of 15,925 wereshared by all eight bean accessions grown in native and agricultural soils, this core microbiome represented a largefraction (25.9%) of all sequence reads. More OTUs were exclusively found in the rhizosphere of common bean in theagricultural soil as compared to the native soil and in the rhizosphere of modern bean accessions as compared to wildaccessions. Co-occurrence analyses further showed a reduction in complexity of the interactions in the beanrhizosphere microbiome in the agricultural soil as compared to the native soil. 650 $adomestication 650 $aMicrobiome 650 $aPhaseolus 650 $arhizosphere 650 $aFeijão 650 $aRizosfera 653 $aCommon bean 653 $aCore microbiome 653 $aNetworks 653 $aWild and modern accessions 700 1 $aHOLLANDER, M. de 700 1 $aRAMÍREZ, C. A. 700 1 $aMENDES, R. 700 1 $aRAAIJMAKERS, J. M. 700 1 $aCARRIÓN, V. J. 773 $tMicrobiome$gv. 7, 2019. Article 114.
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Embrapa Meio Ambiente (CNPMA) |
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