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Registros recuperados : 18 | |
1. | | PRADO, G. S.; PINHEIRO, T. T.; FARIA, J. C. de; VIANELLO, R. P. Genome editing via non-homologous end-joining (NHEJ) and ribonucleoproteins (RNP). In: MOLINARI, H. B. C.; VIEIRA, L. R.; SILVA, N. V. e; PRADO, G. S.; LOPES FILHO, J. F. (Ed.). CRISPR technology in plant genome editing: biotechnology applied to agriculture. Brasília, DF : Embrapa, 2021. p. 47-88. il. Biblioteca(s): Embrapa Arroz e Feijão. |
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2. | | PRADO, G. S.; PINHEIRO, T. T.; FARIA, J. C. de; VIANELLO, R. P. Edição de genoma via non-homologous end joining (NHEJ) e ribonucleoproteínas (RNP). In: MOLINARI, H. B. C.; VIEIRA, L. R.; SILVA, N. V. e; PRADO, G. S.; LOPES FILHO, J. H. (Ed.). Tecnologia CRISPR na edição genômica de plantas: biotecnologia aplicada à agricultura. Brasília, DF: Embrapa, 2020. p. 49-90. Cap. 2. Biblioteca(s): Embrapa Arroz e Feijão. |
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6. | | HABIBI, P.; PRADO, G. S.; PELEGRINI, P. B.; HEFFERON, K. L.; SOCCOL, C. R.; GROSSI-DE-SA, M. F. Optimization of inside and outside factors to improve recombinant protein yield in plant. Plant Cell, Tissue and Organ Culture, v. 130, n. 3, p. 449-467, 2017. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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7. | | PINHEIRO, T. T.; PRADO, G. S.; VALDISSER, P. A. M. R.; FARIA, J. C. de; VIANELLO, R. P. Validação de genes codificadores dos precursores de proantocianidina envolvidos no escurecimento pós-colheita em feijão carioca, visando à engenharia de genoma. In: CONGRESSO NACIONAL DE PESQUISA DE FEIJÃO, 13., 2021, Goiânia. Conectividade tecnológica, intensificação sustentável: resumos. Brasília, DF: Embrapa; Santo Antônio de Goiás: Embrapa Arroz e Feijão, 2021. p. 16. Evento online. Biblioteca(s): Embrapa Arroz e Feijão. |
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8. | | PRADO, G. S.; PINHEIRO, T. T.; VIANELLO, R. P.; VALDISSER, P. A. M. R.; COELHO, G. R. C.; FARIA, J. C. de. Aplicação da tecnologia CRISPR no silenciamento de genes DRIP para obtenção de tolerância à seca em feijoeiro comum (Phaseolus vulgaris). In: CONGRESSO NACIONAL DE PESQUISA DE FEIJÃO, 13., 2021, Goiânia. Conectividade tecnológica, intensificação sustentável: resumos. Brasília, DF: Embrapa; Santo Antônio de Goiás: Embrapa Arroz e Feijão, 2021. p. 15. Evento online. Biblioteca(s): Embrapa Arroz e Feijão. |
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9. | | MÜLLER, B. S. de F.; SAKAMOTO, T.; MENEZES, I. P. P. de; PRADO, G. S.; MARTINS, W. S.; BRONDANI, C.; BARROS, E. G. de; VIANELLO, R. P. Analysis of BAC-end sequences in common bean (Phaseolus vulgaris L.) towards the development and characterization of long motifs SSRs. Plant Molecular Biology, Dordrecht, v. 86, n. 4/5, p. 455-470, Nov. 2014. Biblioteca(s): Embrapa Arroz e Feijão. |
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10. | | PRADO, G. S.; COELHO, G. R. C.; MENEZES, I. P. P. de; OLIVEIRA, J. P. de; COSTA, J. G. C. da; BRONDANI, C.; VIANELLO, R. P. Análise da diversidade genética de variedades tradicionais de feijoeiro comum utilizando marcadores microssatélites. In: SEMINÁRIO JOVENS TALENTOS, 7., 2013, Santo Antônio de Goiás. Coletânea dos resumos apresentados. Santo Antônio de Goiás: Embrapa Arroz e Feijão, 2013. p. 48. (Embrapa Arroz e Feijão. Documentos, 292). Pôster - graduação. Biblioteca(s): Embrapa Arroz e Feijão. |
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11. | | PRADO, G. S.; PINHEIRO, T. T.; VALDISSER, P. A. M. R.; COELHO, G. R. C.; VIANELLO, R. P.; FARIA, J. C. de. Estabelecimento e validação da edição de genoma via CRISPR/Cas em feijoeiro comum (Phaseolus vulgaris) por knockout de GUS. In: CONGRESSO NACIONAL DE PESQUISA DE FEIJÃO, 13., 2021, Goiânia. Conectividade tecnológica, intensificação sustentável: resumos. Brasília, DF: Embrapa; Santo Antônio de Goiás: Embrapa Arroz e Feijão, 2021. p. 14. Evento online. Biblioteca(s): Embrapa Arroz e Feijão. |
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12. | | MAXIMIANO, M. R.; TÁVORA, F. T. P. K.; PRADO, G. S.; DIAS, S. C.; REIS, A. M. dos; FRANCO, O. L. CRISPR genome dditing technology: a powerful tool applied to developing agribusiness. Journal of Agricultural and Food Chemistry, v. 69, n. 23, p. 6379-6395, 2021. Na Publicação: Angela Mehta. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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13. | | HABIB, P.; SOCCOL, C. R.; O'KEEFE, B. R.; KRUMPE, L. R. H.; WILSON, J.; MACEDO, L. L. P. de; FAHEEM, M.; SANTOS, V. O. dos; PRADO, G. S.; BOTELHO, M. A.; LACOMBE, S.; SA, M. F. G. de. Gene-silencing suppressors for high-level production of the HIV-1 entry inhibitor griffithsin in Nicotiana benthamiana. Process Biochemistry, v. 70, p. 45-54, 2018. Na publicação: Maria Fatima Grossi-de-Sa. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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14. | | IBARRA, L. N.; ALVES, A. E. O. de A.; ANTONINO, J. D.; PRADO, G. S.; PINTO, C. E. M.; SOCCOL, C. R.; VASCONCELOS, E. A. R. de; GROSSI-DE-SA, M. F. Enzymatic activity of a recombinant beta-1,4-endoglucanase from the Cotton Boll Weevil (Anthonomus grandis) aiming second generation ethanol production. Scientific Reports, v. 9, 19580, 2019. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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15. | | SANTOS, C.; NOGUEIRA, F. C. S.; DOMONT, G. B.; FONTES, W.; PRADO, G. S.; HABIBI, P.; SANTOS, V. O.; OLIVEIRA-NETO, O. B.; SA, M. F. G. de; JORRÍN-NOVO, J. V.; FRANCO, O. L.; REIS, A. M. dos. Corrigendum: proteomic analysis and functional validation of a Brassica oleracea Endochitinase involved in resistance to Xanthomonas campestris. Frontiers in Plant Science, v. 11, article 201, 2020. Na publicação: Maria Fatima Grossi-de-Sá, Angela Mehta. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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16. | | CAMPOS, M. L.; PRADO, G. S.; SANTOS, V. O. dos; NASCIMENTO, L. C.; DOHMS, S. M.; CUNHA, N. B. da; RAMADA, M. H. S.; GROSSI-DE-SA, M. F.; DIAS, S. C. Mosses: versatile plants for biotechnological applications. Biotechnology Advances, v. 41, article 107533, 2020. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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17. | | PRADO, G. S.; ROCHA, D. C.; SANTOS, L. N. dos; CONTILIANI, D. F.; NOBILE, P. M.; MARTINATI-SCHENK, J. C.; PADILHA, L.; MALUF, M. P.; LUBINI, G.; PEREIRA, T. C.; MONTEIRO-VITORELLO, C. B.; CRESTE, S.; BOSCARIOL-CAMARGO, R. L.; TAKITA, M. A.; CRISTOFANI-YALY, M.; SOUZA, A. A. de. CRISPR technology towards genome editing of the perennial and semi-perennial crops citrus, coffee and sugarcane. Frontiers in Plant Science, v. 14, article 1331258, 2023. Biblioteca(s): Embrapa Café. |
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18. | | PRADO, G. S.; BAMOGO, P. K. Z.; ABREU, J. A. C. de; GILLET, F. X.; SANTOS, V. O. dos; SILVA, M. C. M. da; BRIZARD, J. P.; BEMQUERER, M. P.; BANGRATZ, M.; BRUGIDOU, C.; SÉRÉMÉ, D.; SA, M. F. G. de; LACOMBE, S. Nicotiana benthamiana is a suitable transient system for high-level expression of an active inhibitor of cotton boll weevil alfa-amylase. BMC Biotechnology, v. 19, n. 1, p.15, 2019. Na publicação: Maria Cristina Mattar Silva, Maria Fatima Grossi-de-Sa. Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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Registros recuperados : 18 | |
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| Acesso ao texto completo restrito à biblioteca da Embrapa Arroz e Feijão. Para informações adicionais entre em contato com cnpaf.biblioteca@embrapa.br. |
Registro Completo
Biblioteca(s): |
Embrapa Arroz e Feijão. |
Data corrente: |
01/09/2014 |
Data da última atualização: |
09/12/2014 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Circulação/Nível: |
A - 1 |
Autoria: |
MÜLLER, B. S. de F.; SAKAMOTO, T.; MENEZES, I. P. P. de; PRADO, G. S.; MARTINS, W. S.; BRONDANI, C.; BARROS, E. G. de; VIANELLO, R. P. |
Afiliação: |
BÁRBARA SALOMÃO DE FARIA MÜLLER, UFV; TETSU SAKAMOTO, UFMG; IVANDILSON PESSOA PINTO DE MENEZES, INSTITUTO FEDERAL GOIANO, Urutaí-GO; GUILHERME SOUZA PRADO, bolsista CNPAF; WELLINGTON SANTOS MARTINS, UFG; CLAUDIO BRONDANI, CNPAF; EVERALDO GONÇALVES DE BARROS, UNIVERSIDADE CATÓLICA DE BRASÍLIA; ROSANA PEREIRA VIANELLO, CNPAF. |
Título: |
Analysis of BAC-end sequences in common bean (Phaseolus vulgaris L.) towards the development and characterization of long motifs SSRs. |
Ano de publicação: |
2014 |
Fonte/Imprenta: |
Plant Molecular Biology, Dordrecht, v. 86, n. 4/5, p. 455-470, Nov. 2014. |
DOI: |
10.1007/s11103-014-0240-7 |
Idioma: |
Inglês |
Conteúdo: |
The increasing volume of genomic data on the Phaseolus vulgaris species have contributed to its importance as a model genetic species and positively affected the investigation of other legumes of scientific and economic value. To expand and gain a more in-depth knowledge of the common bean genome, the ends of a number of bacterial artificial chromosome (BAC) were sequenced, annotated and the presence of repetitive sequences was determined. In total, 52,270 BESs (BAC-end sequences), equivalent to 32 Mbp (~6 %) of the genome, were processed. In total, 3,789 BES-SSRs were identified, with a distribution of one SSR (simple sequence repeat) per 8.36 kbp and 2,000 were suitable for the development of SSRs, of which 194 were evaluated in low-resolution screening. From 40 BES-SSRs based on long motifs SSRs (≥trinucleotides) analyzed in high-resolution genotyping, 34 showed an equally good amplification for the Andean and for the Mesoamerican genepools, exhibiting an average gene diversity (H E) of 0.490 and 5.59 alleles/locus, of which six classified as Class I showed a H E ≥ 0.7. The PCoA and structure analysis allowed to discriminate the gene pools (K = 2, FST = 0.733). From the 52,270 BESs, 2 % corresponded to transcription factors and 3 % to transposable elements. Putative functions for 24,321 BESs were identified and for 19,363 were assigned functional categories (gene ontology). This study identified highly polymorphic BES-SSRs containing tri- to hexanucleotides motifs and bringing together relevant genetic characteristics useful for breeding programs. Additionally, the BESs were incorporated into the international genome-sequencing project for the common bean. MenosThe increasing volume of genomic data on the Phaseolus vulgaris species have contributed to its importance as a model genetic species and positively affected the investigation of other legumes of scientific and economic value. To expand and gain a more in-depth knowledge of the common bean genome, the ends of a number of bacterial artificial chromosome (BAC) were sequenced, annotated and the presence of repetitive sequences was determined. In total, 52,270 BESs (BAC-end sequences), equivalent to 32 Mbp (~6 %) of the genome, were processed. In total, 3,789 BES-SSRs were identified, with a distribution of one SSR (simple sequence repeat) per 8.36 kbp and 2,000 were suitable for the development of SSRs, of which 194 were evaluated in low-resolution screening. From 40 BES-SSRs based on long motifs SSRs (≥trinucleotides) analyzed in high-resolution genotyping, 34 showed an equally good amplification for the Andean and for the Mesoamerican genepools, exhibiting an average gene diversity (H E) of 0.490 and 5.59 alleles/locus, of which six classified as Class I showed a H E ≥ 0.7. The PCoA and structure analysis allowed to discriminate the gene pools (K = 2, FST = 0.733). From the 52,270 BESs, 2 % corresponded to transcription factors and 3 % to transposable elements. Putative functions for 24,321 BESs were identified and for 19,363 were assigned functional categories (gene ontology). This study identified highly polymorphic BES-SSRs containing tri- to hexanucleotides mo... Mostrar Tudo |
Thesagro: |
Feijão; Genética molecular; Phaseolus vulgaris. |
Thesaurus NAL: |
Beans; Fabaceae; Genomics; Microsatellite repeats; Molecular genetics; Transcription factors; Transposons. |
Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
Marc: |
LEADER 02734naa a2200337 a 4500 001 1993888 005 2014-12-09 008 2014 bl uuuu u00u1 u #d 024 7 $a10.1007/s11103-014-0240-7$2DOI 100 1 $aMÜLLER, B. S. de F. 245 $aAnalysis of BAC-end sequences in common bean (Phaseolus vulgaris L.) towards the development and characterization of long motifs SSRs.$h[electronic resource] 260 $c2014 520 $aThe increasing volume of genomic data on the Phaseolus vulgaris species have contributed to its importance as a model genetic species and positively affected the investigation of other legumes of scientific and economic value. To expand and gain a more in-depth knowledge of the common bean genome, the ends of a number of bacterial artificial chromosome (BAC) were sequenced, annotated and the presence of repetitive sequences was determined. In total, 52,270 BESs (BAC-end sequences), equivalent to 32 Mbp (~6 %) of the genome, were processed. In total, 3,789 BES-SSRs were identified, with a distribution of one SSR (simple sequence repeat) per 8.36 kbp and 2,000 were suitable for the development of SSRs, of which 194 were evaluated in low-resolution screening. From 40 BES-SSRs based on long motifs SSRs (≥trinucleotides) analyzed in high-resolution genotyping, 34 showed an equally good amplification for the Andean and for the Mesoamerican genepools, exhibiting an average gene diversity (H E) of 0.490 and 5.59 alleles/locus, of which six classified as Class I showed a H E ≥ 0.7. The PCoA and structure analysis allowed to discriminate the gene pools (K = 2, FST = 0.733). From the 52,270 BESs, 2 % corresponded to transcription factors and 3 % to transposable elements. Putative functions for 24,321 BESs were identified and for 19,363 were assigned functional categories (gene ontology). This study identified highly polymorphic BES-SSRs containing tri- to hexanucleotides motifs and bringing together relevant genetic characteristics useful for breeding programs. Additionally, the BESs were incorporated into the international genome-sequencing project for the common bean. 650 $aBeans 650 $aFabaceae 650 $aGenomics 650 $aMicrosatellite repeats 650 $aMolecular genetics 650 $aTranscription factors 650 $aTransposons 650 $aFeijão 650 $aGenética molecular 650 $aPhaseolus vulgaris 700 1 $aSAKAMOTO, T. 700 1 $aMENEZES, I. P. P. de 700 1 $aPRADO, G. S. 700 1 $aMARTINS, W. S. 700 1 $aBRONDANI, C. 700 1 $aBARROS, E. G. de 700 1 $aVIANELLO, R. P. 773 $tPlant Molecular Biology, Dordrecht$gv. 86, n. 4/5, p. 455-470, Nov. 2014.
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