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| Registros recuperados : 180 | |
| 121. |  | MOLINARI, H. B. C.; MARUR, C. J.; BESPALHOK FILHO, J. C.; KOBAYASHI, A. K.; PILEGGI, M.; LEITE JÚNIOR, R. P.; PEREIRA, L. F. P.; VIEIRA, L. G. E. Osmotic adjustment in transgenic citrus rootstock Carrizo citrange (Citrus sinensis Osb. x Poncirus trifoliata L. Raf.) overproducing proline. Plant Science, v. 167, n. 6, p. 1375-1381, 2004.| Biblioteca(s): Embrapa Café. |
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| 122. | | POT, D.; SCHOLZ, M. B. dos S.; LANNES, S. D.; DEL GROSSI, L.; PEREIRA, L. F. P.; VIEIRA, L. G.; SERA, T. Phenotypic analysis of coffea arabica accessions from ethipia: contribution to the understanding of coffea arabica diversity. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 22., 2008, Campinas.| Biblioteca(s): Embrapa Café. |
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| 123. | | CHARMETANT, P.; ANDRADE, G.; FERREIRA, R.; MARRACCINI, P.; GUERA, A.; BARTOLO, G.; POT, D.; LEROY, T.; SERA, T.; PEREIRA, L. F. P. Phenotyping and genotyping genetic resources of Coffea arabica at IAPAR. FAO collection, preliminary results. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 24., 2012, Costa Rica. Programme & abstracts. [S.l.]: Association for Science and Information on Coffee, 2012. p. 221| Biblioteca(s): Embrapa Café. |
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| 124. | | DOMINGUES, D. S.; MEDA, A. R.; SANTOS, T. B.; VESPERO, E. B.; SITTA, R. B.; PEREIRA, L. F. P.; VIEIRA, L. G. E. Coffea nutriome: minding the gap among genomics, biotechnology and fertilization practices. In.: CONGRESSO BRASILEIRO DE GENÉTICA, 56., 2010, Guarujá.| Biblioteca(s): Embrapa Café; Embrapa Unidades Centrais. |
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| 125. | | SCHOLZ, M. B. dos S.; KITZBERGER, C. S. G.; PAGIATTO, N. F.; PEREIRA, L. F. P.; DAVRIEUX, F.; POT, D.; CHARMETANT, P.; LEROY, T. Chemical composition in wild ethiopian Arabica coffee accessions. Euphytica, v. 209, n. 2 p. 429-438, 2016.| Biblioteca(s): Embrapa Café. |
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| 127. | | SCHOLZ, M. B. dos S.; KITZBERGER, C. S. G.; PEREIRA, L. F. P.; DAVRIEUX, F.; POT, D.; CHARMETANT, P.; LEROY, T. Application of near infrared spectroscopy for green coffee biochemical phenotyping. Journal of Near Infrared Spectroscopy, v. 22, n. 6, p. 411-421, 2014.| Biblioteca(s): Embrapa Café. |
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| 128. | | PEREIRA, L. F. P.; CAÇÃO, S. M. B.; SILVA, N. V.; ALVES, G. S. C.; VINECKY, F.; CAIXETA, E. T.; ANDRADE, A. C.; VIEIRA, L. G. E. Using a coffea arabica bacterial artificial chromosome library for gene cloning and integrative mapping approaches. In: THE INTERNATIONAL CONFERENCE ON THE STATUS OF PLANT & ANIMAL GENOME RESEARCH, 16., 2008, San Diego. Final abstracts guide. San Diego, 2008, p. 276.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 129. | | CAÇÃO, S. M. B.; SILVA, N. V.; ALVES, G. S. C.; VINECKY, F.; DINIZ, L. E. C.; ANDRADE, A. C.; PEREIRA, L. F. P.; VIEIRA, L. G. E. Using coffea arabica bacterial artificial chromosome library for gene cloning and integrative mapping aproaches. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 22., 2008, Campinas, Brazil. Programme abstracts. Montpellier, France: Association for Science and Information on Coffee, 2008. PB633.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 130. | | CAÇÃO, S. M. B.; SILVA, N. V.; ALVES, G. S. C.; VINIECK, F.; DINIZ, L. E. C.; ANDRADE, A. C.; PEREIRA, L. F. P.; VIEIRA, L. G. E. Using a Coffea arabica bacterial artificial chromosome library for gene cloning and integrative mapping aproaches. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 22., 2008, Campinas, Brazil.| Biblioteca(s): Embrapa Unidades Centrais. |
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| 131. | | CAÇÃO, S. M. B.; SILVA, N. V.; ALVES, G. S. C.; VINIECK, F.; DINIZ, L. E. C.; ANDRADE, A. C.; PEREIRA, L. F. P.; VIEIRA, L. G. E. Using a Coffea arabica bacterial artificial chromosome library for gene cloning and integrative mapping aproaches. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 22., 2008, Campinas, Brazil.| Biblioteca(s): Embrapa Café. |
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| 132. | | SILVA, B. S. R. da; SANT'ANA, G. C.; CHAVES, C. L.; ANDROCIOLI, L. G.; FERREIRA, R. V.; SERA, G. H.; CHARMETANT, P.; LEROY, T.; POT, D.; DOMINGUES, D. S.; PEREIRA, L. F. P. Population structure and genetic relationships between Ethiopian and Brazilian Coffea arabica genotypes revealed by SSR markers. Genetica, v. 147, n. 2, p. 205–216, April 2019.| Biblioteca(s): Embrapa Café. |
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| 133. | | SANTOS, T. B. dos; LIMA, R. B. de; NAGASHIMA, G. T.; PETKOWICZ, C. L. de O.; CARPENTIERI-PÍPOLO, V.; PEREIRA, L. F. P.; DOMINGUES, D. S.; VIEIRA, L. G. E. Galactinol synthase transcriptional profile in two genotypes of Coffea canephora with contrasting tolerance to drought. Genetics and Molecular Biology, v. 38, n. 2, p. 182-190, 2015| Biblioteca(s): Embrapa Café. |
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| 134. | | VIDAL, R. O.; MONDEGO, J. M. C.; POT, D.; AMBRÓSIO, A. B.; ANDRADE, A. C.; PEREIRA, L. F. P.; COLOMBO, C. A.; VIEIRA, L. G. E.; CARAZZOLLE, M. F.; PEREIRA, G. A. G. A high-throughput data mining of single nucleotide polymorphisms in Coffea species expresed sequence tags suggests differential homeologous gene expression in the allotetrapoloid Coffea arabica. PLANT PHYSIOLOGY, v. 154, p. 1053-1066. 2010. 1053-1066| Biblioteca(s): Embrapa Café; Embrapa Recursos Genéticos e Biotecnologia; Embrapa Unidades Centrais. |
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| 135. | | POT, D.; FERREIRA, L. P.; DIAS, R. C. E.; DURAND, N.; GUYOT, B.; RAMOS, J.; PERTHUIS, B.; SANDRIN, P.; BENASSI M. T.; MARRACCINI, P.; PEREIRA, L. F. P.; LEROY, T.; VIEIRA, L. G. E. Genetic and molecular determinism of diterpene metabolism in Coffea spp. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 22., 2008, Campinas.| Biblioteca(s): Embrapa Café. |
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| 136. | | CAÇÃO, S. M. B.; LEITE, T. F.; BUDZINSKI, I. G. F.; SANTOS, T. B.; SCHOLZ, M. B. S.; CARPENTIERI-PIPOLO, V.; DOMINGUES, D. S.; VIEIRA, L. G. E.; PEREIRA, L. F. P. Gene expression and enzymatic activity of pectin methylesterase during fruit development and ripening in Coffea arabica L. Genetics and Molecular Research, v. 11, n. 3, p. 3186-3197, 2012.| Biblioteca(s): Embrapa Café. |
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| 137. | | YUYAMA, P. M.; POT, D.; DEREEPER, A.; POINTET, S.; SILVA, J. B. G. D. da; SERA, G. H.; SERA, T.; CHARMETANT, P.; DOMINGUES, D. S.; LEROY, T.; PEREIRA, L. F. P. Identificação de polimorfismos em genótipos de Coffea arabica de uma coleção da Etiópia. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 8., 2013, Salvador. Sustentabilidade e inclusão Social. Brasília, DF: Embrapa Café, 2013.| Biblioteca(s): Embrapa Café. |
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| 138. | | PEREIRA, L. F. P.; SCHENK, J. C. M.; MALUF, M. P.; SANT'ANA, G. C.; NOGUEIRA, L.; PEREIRA, L. A.; SILVA, B. S. R. da; GUIMARÃES, P. de S.; GUERREIRO FILHO, O.; PADILHA, L. Marcadores SNP avaliados em cultivares de Café Arábica. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 10., 2019, Vitória. Pesquisa, Inovação e Sustentabilidade dos Cafés do Brasil. Anais... Brasília, DF: Embrapa Café, 2019. Título em inglês: SNP markers assessed in Arabica coffee cultivars.| Biblioteca(s): Embrapa Café. |
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| 139. | | MARRACCINI, P.; GEROMEL, C.; FERREIRA, L. P.; PEREIRA, L. F. P.; LEROY, T.; POT, D.; DAVRIEUX, F.; RIBEYRE, F.; GUYOT, B.; SCHOLZ, M. B. S.; ANDROCIOLI FILHO, A.; VIEIRA, L. G. E.; MAZZAFERA, P. Soluble sugars, enzymatic activities and gene expression during development of coffee fruits submitted to shade condition. In:INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 21., 2006, Montpellier, France. Table of contents... Montpellier, France: Association for Science and Information on Coffee, 2007. 1 CD-ROM.| Biblioteca(s): Embrapa Café. |
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| 140. | | TISKI, I.; PEREIRA, L. F. P.; VIEIRA, L. G. E.; TAKAHASHI, E. K.; FERREIRA, L. P.; MARRACCINI, P.; POT, D.; LEROY, T.; BENASSI, M. T.; DIAS, R. C. E. In silico and in vitro analysis of the isoprenoid pathway in coffee. In:INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 21., 2006, Montpellier, France. Table of contents... Montpellier, France: Association for Science and Information on Coffee, 2007. 1 CD-ROM.| Biblioteca(s): Embrapa Café. |
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| Registros recuperados : 180 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Café; Embrapa Recursos Genéticos e Biotecnologia. |
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Data corrente: |
18/02/2011 |
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Data da última atualização: |
28/02/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
VIDAL, R. O.; MONDEGO, J. M. C.; POT, D.; AMBRÓSIO, A. B.; ANDRADE, A. C.; PEREIRA, L. F. P.; COLOMBO, C. A.; VIEIRA, L. G. E.; CARAZZOLLE, M. F.; PEREIRA, G. A. G. |
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Afiliação: |
RAMON OLIVEIRA VIDAL, UNICAMP/Instituto de Biologia; JORGE MAURÍCIO COSTA MONDEGO, Instituto Agronômico de Campinas; DAVID POT, Centre de Coopération Internationale en Recherche Agronomique pour le Développement; ALINNE BATISTA AMBRÓSIO, UNICAMP/Instituto de Biologia; ALAN CARVALHO ANDRADE, CENARGEN; LUIZ FILIPE PROTASIO PEREIRA, SAPC; CARLOS AUGUSTO COLOMBO, Instituto Agronômico de Campinas; LUIZ GONZAGA ESTEVES VIEIRA, Instituo Agronômico do Pará; MARCELO FALSARELLA CARAZZOLLE, UNICAMP/Instituto de Biologia; GONÇALO AMARANTE GUIMARÃES PEREIRA, UNICAMP/Instituto de Biologia. |
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Título: |
A high-throughput data mining of single nucleotide polymorphisms in Coffea species expresed sequence tags suggests differential homeologous gene expression in the allotetrapoloid Coffea arabica. |
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Ano de publicação: |
2010 |
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Fonte/Imprenta: |
PLANT PHYSIOLOGY, v. 154, p. 1053-1066. 2010. |
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Páginas: |
1053-1066 |
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Idioma: |
Inglês |
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Conteúdo: |
Polyploidization constitutes a common mode of evolution in flowering plants. This event provides the raw material for the divergence of function in homeologous genes, leading to phenotypic novelty that can contribute to the success of polyploids in nature or their selection for use in agriculture. Mounting evidence underlined the existence of homeologous expression biases in polyploid genomes; however, strategies to analyze such transcriptome regulation remained scarce. Important factors regarding homeologous expression biases remain to be explored, such as whether this phenomenon influences specific genes, how paralogs are affected by genome doubling, and what is the importance of the variability of homeologous expression bias to genotype differences. This study reports the expressed sequence tag assembly of the allopolyploid Coffea arabica and one of its direct ancestors, Coffea canephora. The assembly was used for the discovery of single nucleotide polymorphisms through the identification of high-quality discrepancies in overlapped expressed sequence tags and for gene expression information indirectly estimated by the transcript redundancy. Sequence diversity profiles were evaluated within C. arabica (Ca) and C. canephora (Cc) and used to deduce the transcript contribution of the Coffea eugenioides (Ce) ancestor. The assignment of the C. arabica haplotypes to the C. canephora (CaCc) or C. eugenioides (CaCe) ancestral genomes allowed us to analyze gene expression contributions of each subgenome in C. arabica. In silico data were validated by the quantitative polymerase chain reaction and allele-specific combination TaqMAMA-based method. The presence of differential expression of C. arabica homeologous genes and its implications in coffee gene expression, ontology, and physiology are discussed. MenosPolyploidization constitutes a common mode of evolution in flowering plants. This event provides the raw material for the divergence of function in homeologous genes, leading to phenotypic novelty that can contribute to the success of polyploids in nature or their selection for use in agriculture. Mounting evidence underlined the existence of homeologous expression biases in polyploid genomes; however, strategies to analyze such transcriptome regulation remained scarce. Important factors regarding homeologous expression biases remain to be explored, such as whether this phenomenon influences specific genes, how paralogs are affected by genome doubling, and what is the importance of the variability of homeologous expression bias to genotype differences. This study reports the expressed sequence tag assembly of the allopolyploid Coffea arabica and one of its direct ancestors, Coffea canephora. The assembly was used for the discovery of single nucleotide polymorphisms through the identification of high-quality discrepancies in overlapped expressed sequence tags and for gene expression information indirectly estimated by the transcript redundancy. Sequence diversity profiles were evaluated within C. arabica (Ca) and C. canephora (Cc) and used to deduce the transcript contribution of the Coffea eugenioides (Ce) ancestor. The assignment of the C. arabica haplotypes to the C. canephora (CaCc) or C. eugenioides (CaCe) ancestral genomes allowed us to analyze gene expression contribut... Mostrar Tudo |
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Thesagro: |
Coffea Arábica. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/29342/1/A-high-throughput.pdf
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Marc: |
LEADER 02657naa a2200253 a 4500
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100 1 $aVIDAL, R. O.
245 $aA high-throughput data mining of single nucleotide polymorphisms in Coffea species expresed sequence tags suggests differential homeologous gene expression in the allotetrapoloid Coffea arabica.$h[electronic resource]
260 $c2010
300 $a1053-1066
520 $aPolyploidization constitutes a common mode of evolution in flowering plants. This event provides the raw material for the divergence of function in homeologous genes, leading to phenotypic novelty that can contribute to the success of polyploids in nature or their selection for use in agriculture. Mounting evidence underlined the existence of homeologous expression biases in polyploid genomes; however, strategies to analyze such transcriptome regulation remained scarce. Important factors regarding homeologous expression biases remain to be explored, such as whether this phenomenon influences specific genes, how paralogs are affected by genome doubling, and what is the importance of the variability of homeologous expression bias to genotype differences. This study reports the expressed sequence tag assembly of the allopolyploid Coffea arabica and one of its direct ancestors, Coffea canephora. The assembly was used for the discovery of single nucleotide polymorphisms through the identification of high-quality discrepancies in overlapped expressed sequence tags and for gene expression information indirectly estimated by the transcript redundancy. Sequence diversity profiles were evaluated within C. arabica (Ca) and C. canephora (Cc) and used to deduce the transcript contribution of the Coffea eugenioides (Ce) ancestor. The assignment of the C. arabica haplotypes to the C. canephora (CaCc) or C. eugenioides (CaCe) ancestral genomes allowed us to analyze gene expression contributions of each subgenome in C. arabica. In silico data were validated by the quantitative polymerase chain reaction and allele-specific combination TaqMAMA-based method. The presence of differential expression of C. arabica homeologous genes and its implications in coffee gene expression, ontology, and physiology are discussed.
650 $aCoffea Arábica
700 1 $aMONDEGO, J. M. C.
700 1 $aPOT, D.
700 1 $aAMBRÓSIO, A. B.
700 1 $aANDRADE, A. C.
700 1 $aPEREIRA, L. F. P.
700 1 $aCOLOMBO, C. A.
700 1 $aVIEIRA, L. G. E.
700 1 $aCARAZZOLLE, M. F.
700 1 $aPEREIRA, G. A. G.
773 $tPLANT PHYSIOLOGY$gv. 154, p. 1053-1066. 2010.
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Embrapa Recursos Genéticos e Biotecnologia (CENARGEN) |
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