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| Registros recuperados : 180 | |
| 122. |  | IVAMOTO, S. T.; KITZBERGER, C. S. G.; SCHOLZ, M. B. S.; ANDRADE, D. S.; ALVES, L. C.; DOMINGUES, D. S.; VIEIRA, L. G. E.; PEREIRA, L. F. P. In silico analysis of cytochrome p450 genes involved in the metabolism of diterpenes in Coffea. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 3., 2011, Ilhéus. Resumos...| Biblioteca(s): Embrapa Café. |
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| 123. | | GEROMEL, C.; FERREIRA, L. P.; CAVALARI, A. A.; PEREIRA, L. F. P.; VIEIRA, L. G. E.; LEROY, T.; MAZZAFERA, P.; MARRACCINI, P. Sugar metabolism during coffee fruit development. In:INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 20., 2004, Bangalore, India. Anais... Montpellier, France: Association for Science and Information on Coffee, 2005. 1 CD-ROM.| Biblioteca(s): Embrapa Café. |
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| 124. | | GEROMEL, C.; FERREIRA, L. P.; BOTTCHER, A.; POT, D.; PEREIRA, L. F. P.; LEROY, T.; VIEIRA, L. G. E.; MAZZAFERA, P.; MARRACCINI, P. Sucrose metabolism during fruit development in coffea racemosa. Annals of Applied Biology, v. 152, n. 2, p.179-187, 2008.| Biblioteca(s): Embrapa Café; Embrapa Unidades Centrais. |
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| 125. | | IVAMOTO, S. T.; CALEDÓN, J. M.; KITZBERGER, C. S. G.; SCHOLZ, M. B. S.; BOHLMANN, J.; DOMINGUES, D. S.; PEREIRA, L. F. P. Transcriptome analysis and characterization of genes involved in diterpene biosynthesis in coffea arabica. In: CONGRESSO BRASILEIRO DE MELHORAMENTO DE PLANTAS, 9., 2017, Foz de Iguaçu. Melhoramento de plantas: projetando o futuro. Maringá, PR: SBMP, 2017. p. 105| Biblioteca(s): Embrapa Café. |
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| 126. | | YUYAMA, P. M.; REIS JUNIOR, O.; IVAMOTO, S. T.; DOMINGUES, D. S.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; CHARMETANT, P.; LEROY, T.; PEREIRA, L. F. P. Transcriptome analysis in Coffea eugenioides, an Arabica coffee ancestor, reveals differentially expressed genes inleaves and fruits. Molecular Genetics and Genomics, v. 291, n. 1, p. 323-336. 2016| Biblioteca(s): Embrapa Café. |
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| 127. | | SCHOLZ, M. B. S.; PAGIATTO, N. F.; KITZBERGER, C. S. G.; PEREIRA, L. F. P.; DAVRIEUX, F.; CHARMETANTE, P.; LEROYE, T. Validation of near-infrared spectroscopy for the quantification of cafestol and kahweol in green coffee. Food Research International, v. 61, p. 176-182, 2014.| Biblioteca(s): Embrapa Café. |
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| 128. | | PEREIRA, L. F. P.; CAÇÃO, S. M. B.; SILVA, N. V.; ALVES, G. S. C.; VINECKY, F.; CAIXETA, E. T.; ANDRADE, A. C.; VIEIRA, L. G. E. Using a coffea arabica bacterial artificial chromosome library for gene cloning and integrative mapping approaches. In: THE INTERNATIONAL CONFERENCE ON THE STATUS OF PLANT & ANIMAL GENOME RESEARCH, 16., 2008, San Diego. Final abstracts guide. San Diego, 2008, p. 276.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 129. | | CAÇÃO, S. M. B.; SILVA, N. V.; ALVES, G. S. C.; VINECKY, F.; DINIZ, L. E. C.; ANDRADE, A. C.; PEREIRA, L. F. P.; VIEIRA, L. G. E. Using coffea arabica bacterial artificial chromosome library for gene cloning and integrative mapping aproaches. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 22., 2008, Campinas, Brazil. Programme abstracts. Montpellier, France: Association for Science and Information on Coffee, 2008. PB633.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 130. | | CAÇÃO, S. M. B.; SILVA, N. V.; ALVES, G. S. C.; VINIECK, F.; DINIZ, L. E. C.; ANDRADE, A. C.; PEREIRA, L. F. P.; VIEIRA, L. G. E. Using a Coffea arabica bacterial artificial chromosome library for gene cloning and integrative mapping aproaches. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 22., 2008, Campinas, Brazil.| Biblioteca(s): Embrapa Unidades Centrais. |
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| 131. | | CAÇÃO, S. M. B.; SILVA, N. V.; ALVES, G. S. C.; VINIECK, F.; DINIZ, L. E. C.; ANDRADE, A. C.; PEREIRA, L. F. P.; VIEIRA, L. G. E. Using a Coffea arabica bacterial artificial chromosome library for gene cloning and integrative mapping aproaches. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 22., 2008, Campinas, Brazil.| Biblioteca(s): Embrapa Café. |
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| 132. | | CHARMETANT, P.; PERTHUIS, B.; BEDIMO, J. M.; MANGA, A. M.; GUERRA, A. F.; BARTHOLO, G. F.; ROCHA, O. C.; LEROY, T.; PEREIRA, L. F. P.; RODRIGUES, G. C.; ANDRADE, A. C.; MARRACCINI, P. Adaptação de acessos de Coffea arabica provenientes de Camarões em várias condições edafoclimáticas. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 9., 2015, Curitiba. Consórcio pesquisa café: oportunidades e novos desafios: anais. Brasília, DF: Embrapa Café, 2015. Não paginado.| Biblioteca(s): Embrapa Café; Embrapa Recursos Genéticos e Biotecnologia. |
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| 133. | | CHARMETANT, P.; PERTHUIS, B.; BEDIMO, J. M.; MANGA, A. M.; GUERRA, A. F.; BARTHOLO, G. F.; ROCHA, O. C.; LEROY, T.; PEREIRA, L. F. P.; RODRIGUES, G. C.; ANDRADE, A. C.; MARRACCINI, P. Adaptação de acessos de Coffea arabica provenientes de Camarões em várias condições edafoclimáticas. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 9., 2015, Curitiba. Consórcio pesquisa café: oportunidades e novos desafios: anais. Brasília, DF: Embrapa Café, 2015. Não paginado.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 134. | | OLIVEIRA, F. F. de; TOMAZ, J. P.; SILVA, B. S. R. da; SANTOS, T. B. dos; IVAMOTO-SUZUKI, S. T.; SCHOLZE, M. B. dos S.; PEREIRA, L. F. P. Coffea arabica L. genes from isoprenoid metabolic pathways are more expressed in full sun cultivation systems than in agroforestry systems. Plant Gene, 26, 100287, 2021.| Biblioteca(s): Embrapa Café. |
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| 135. | | SANTOS, T. B. dos; MEDA, A. R.; SITTA, R. B.; VESPERO, E. B.; PAVAN, M. A.; CHARMETANT, P.; PEREIRA, L. F. P.; VIEIRA, L. G. E.; DOMINGUES, D. S. Concentração de nutrientes minerais em acessos da Etiópia de Coffea arabica. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 7., 2011, Araxá. Anais... Brasília, DF: Embrapa Café, 2011.| Biblioteca(s): Embrapa Café. |
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| 136. | | SANTOS, T. B. dos; LIMA, R. B. de; NAGASHIMA, G. T.; PETKOWICZ, C. L. de O.; CARPENTIERI-PÍPOLO, V.; PEREIRA, L. F. P.; DOMINGUES, D. S.; VIEIRA, L. G. E. Galactinol synthase transcriptional profile in two genotypes of Coffea canephora with contrasting tolerance to drought. Genetics and Molecular Biology, v. 38, n. 2, p. 182-190, 2015| Biblioteca(s): Embrapa Café. |
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| 137. | | MONDEGO, J. M. C.; VIDAL, R. O.; CARAZZOLLE, M. F.; TOKUDA, E. K.; PARIZZI, L. P.; COSTA, G. G. L.; PEREIRA, L. F. P.; ANDRADE, A. C.; COLOMBO, C. A.; VIEIRA, L. G. E.; PEREIRA, G. A. G. An EST-based analysis identifies new genes and reveals distinctive gene expression features of Coffea arabica and Coffea canephora. BMC Plant Biology, v.11, n. 30, 2011.| Biblioteca(s): Embrapa Café; Embrapa Recursos Genéticos e Biotecnologia. |
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| 138. | | GEROMEL, C.; FERREIRA, L. P.; DAVRIEUX, F.; GUYOT, B.; RIBEYRE, F.; SCHOLZ, M. B. dos S.; PEREIRA, L. F. P.; VAAST, P.; POT, D.; LEROY, T.; ANDROCIOLI FILHO, A.; VIEIRA, L. G. E.; MAZZAFERA, P.; MARRACCINI, P. Effects of shade on the development and sugar metabolism of coffee (Coffea arabica L.) fruits. PLANT PHYSIOLOGY AND BIOCHEMISTRY, v.46, n.5-6, p.569-579, may-june, 2008. 569-579| Biblioteca(s): Embrapa Café; Embrapa Unidades Centrais. |
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| 139. | | IVAMOTO, S. T.; SAKURAY, L. M.; FERREIRA, L. P.; KITZBERGER, C. S. G.; SCHOLZ, MARIA B. S.; POT, D.; LEROY, T.; VIEIRA, L. G. E.; DOMINGUES, D. S.; PEREIRA, L. F. P. Diterpenes biochemical profile and transcriptional analysis of cytochrome P450s genes in leaves, roots, flowers, and during Coffea arabica L. fruit development. Plant Physiology and Biochemistry, v. 111, p. 340-347, Dec. 2016.| Biblioteca(s): Embrapa Café. |
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| 140. | | IVOMOTO, S. T.; SAKURAY, L. M.; FERREIRA, L. P.; KITZBERGER, C. S. G.; SCHOLZ, M. B. S.; POT, D.; LEROY, T.; VIEIRA, L. G. E.; DOMINGUES, D. S.; PEREIRA, L. F. P. Diterpenes biochemical profile and transcriptional analysis of cytochrome P450s genes in leaves, roots, flowers, and during Coffea arabica L. fruit development. Plant Physiology and Biochemistry, v. 111, p. 340-347, February, 2017.| Biblioteca(s): Embrapa Café. |
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| Registros recuperados : 180 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Café. |
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Data corrente: |
21/12/2017 |
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Data da última atualização: |
26/12/2017 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
IVAMOTO, S. T.; REIS JÚNIOR, O.; DOMINGUES, D. S.; SANTOS, T. B. dos; OLIVEIRA, F. F. de; POT, D.; LEROY, T.; VIEIRA, L. G. E.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; PEREIRA, L. F. P. |
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Afiliação: |
Suzana Tiemi Ivamoto, Programa de Pós-Graduação em Genética e Biologia Molecular/Centro de Ciências Bioloógicas/Universidade Estadual de Londrina - UEL; Osvaldo Reis Júnior, Laboratório de Genômica e Expressão/Departamento de Genética/Evolução e Bioagentes/Instituto de Biologia/Universidade Estadual de Campinas - UNICAMP; Douglas Silva Domingues, Departamento de Botânica/Instituto de Biociências de Rio Claro, Universidade Estadual Paulista - UNESP; Tiago Benedito dos Santos, Laboratório de Biotecnologia Vegetal/Instituto Agronômico do Paraná -IAPAR; Fernanda Freitas de Oliveira, Laboratório de Biotecnologia Vegetal/Instituto Agronômico do Paraná -IAPAR; David Pot, CIRAD/UMR AGAP; Thierry Leroy, CIRAD/UMR AGAP; Luiz Gonzaga Esteves Vieira, Programa de Pós Graduação em Agronomia/Universidade do Oeste Paulista - UNOESTE; Marcelo Falsarella Carazzolle, Laboratório de Genômica e Expressão/Departamento de Genética/Evolução e Bioagentes/Instituto de Biologia/Universidade Estadual de Campinas - UNICAMP; Gonçalo Amarante Guimarães Pereira, Laboratório de Genômica e Expressão/Departamento de Genética/Evolução e Bioagentes/Instituto de Biologia/Universidade Estadual de Campinas - UNICAMP; LUIZ FILIPE PROTASIO PEREIRA, SAPC. |
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Título: |
Transcriptome Analysis of Leaves, Flowers and Fruits Perisperm of Coffea arabica L. Reveals the Differential Expression of Genes Involved in Raffinose Biosynthesis. |
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Ano de publicação: |
2017 |
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Fonte/Imprenta: |
PLOS ONE, January 2017. |
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Idioma: |
Inglês |
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Conteúdo: |
Coffea arabica L. is an important crop in several developing countries. Despite its economic importance, minimal transcriptome data are available for fruit tissues, especially during fruit development where several compounds related to coffee quality are produced. To understand the molecular aspects related to coffee fruit and grain development, we report a largescale transcriptome analysis of leaf, flower and perisperm fruit tissue development. Illumina sequencing yielded 41,881,572 high-quality filtered reads. De novo assembly generated 65,364 unigenes with an average length of 1,264 bp. A total of 24,548 unigenes were annotated as protein coding genes, including 12,560 full-length sequences. In the annotation process, we identified nine candidate genes related to the biosynthesis of raffinose family oligossacarides (RFOs). These sugars confer osmoprotection and are accumulated during initial fruit development. Four genes from this pathway had their transcriptional pattern validated by quantitative reverse transcription polymerase chain reaction (qRT-PCR). Furthermore, we identified ~24,000 putative target sites for microRNAs (miRNAs) and 134 putative transcriptionally active transposable elements (TE) sequences in our dataset. This C. arabica transcriptomic atlas provides an important step for identifying candidate genes related to several coffee metabolic pathways, especially those related to fruit chemical composition and therefore beverage quality. Our results are the starting point for enhancing our knowledge about the coffee genes that are transcribed during the flowering and initial fruit development stages. MenosCoffea arabica L. is an important crop in several developing countries. Despite its economic importance, minimal transcriptome data are available for fruit tissues, especially during fruit development where several compounds related to coffee quality are produced. To understand the molecular aspects related to coffee fruit and grain development, we report a largescale transcriptome analysis of leaf, flower and perisperm fruit tissue development. Illumina sequencing yielded 41,881,572 high-quality filtered reads. De novo assembly generated 65,364 unigenes with an average length of 1,264 bp. A total of 24,548 unigenes were annotated as protein coding genes, including 12,560 full-length sequences. In the annotation process, we identified nine candidate genes related to the biosynthesis of raffinose family oligossacarides (RFOs). These sugars confer osmoprotection and are accumulated during initial fruit development. Four genes from this pathway had their transcriptional pattern validated by quantitative reverse transcription polymerase chain reaction (qRT-PCR). Furthermore, we identified ~24,000 putative target sites for microRNAs (miRNAs) and 134 putative transcriptionally active transposable elements (TE) sequences in our dataset. This C. arabica transcriptomic atlas provides an important step for identifying candidate genes related to several coffee metabolic pathways, especially those related to fruit chemical composition and therefore beverage quality. Our results are the ... Mostrar Tudo |
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Thesagro: |
Coffea Arábica. |
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Thesaurus NAL: |
Biosynthesis; Knowledge; Raffinose. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/169661/1/Transcriptome-analysis-of-leaves-flowers.pdf
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Marc: |
LEADER 02512naa a2200289 a 4500
001 2083340
005 2017-12-26
008 2017 bl uuuu u00u1 u #d
100 1 $aIVAMOTO, S. T.
245 $aTranscriptome Analysis of Leaves, Flowers and Fruits Perisperm of Coffea arabica L. Reveals the Differential Expression of Genes Involved in Raffinose Biosynthesis.$h[electronic resource]
260 $c2017
520 $aCoffea arabica L. is an important crop in several developing countries. Despite its economic importance, minimal transcriptome data are available for fruit tissues, especially during fruit development where several compounds related to coffee quality are produced. To understand the molecular aspects related to coffee fruit and grain development, we report a largescale transcriptome analysis of leaf, flower and perisperm fruit tissue development. Illumina sequencing yielded 41,881,572 high-quality filtered reads. De novo assembly generated 65,364 unigenes with an average length of 1,264 bp. A total of 24,548 unigenes were annotated as protein coding genes, including 12,560 full-length sequences. In the annotation process, we identified nine candidate genes related to the biosynthesis of raffinose family oligossacarides (RFOs). These sugars confer osmoprotection and are accumulated during initial fruit development. Four genes from this pathway had their transcriptional pattern validated by quantitative reverse transcription polymerase chain reaction (qRT-PCR). Furthermore, we identified ~24,000 putative target sites for microRNAs (miRNAs) and 134 putative transcriptionally active transposable elements (TE) sequences in our dataset. This C. arabica transcriptomic atlas provides an important step for identifying candidate genes related to several coffee metabolic pathways, especially those related to fruit chemical composition and therefore beverage quality. Our results are the starting point for enhancing our knowledge about the coffee genes that are transcribed during the flowering and initial fruit development stages.
650 $aBiosynthesis
650 $aKnowledge
650 $aRaffinose
650 $aCoffea Arábica
700 1 $aREIS JÚNIOR, O.
700 1 $aDOMINGUES, D. S.
700 1 $aSANTOS, T. B. dos
700 1 $aOLIVEIRA, F. F. de
700 1 $aPOT, D.
700 1 $aLEROY, T.
700 1 $aVIEIRA, L. G. E.
700 1 $aCARAZZOLLE, M. F.
700 1 $aPEREIRA, G. A. G.
700 1 $aPEREIRA, L. F. P.
773 $tPLOS ONE, January 2017.
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