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| Registros recuperados : 108 | |
| 81. |  | GUIMARAES, P. M.; BRASILEIRO, A. C. M.; MORGANTE, C. V.; ROBERTS, P. A.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; BERTIOLI, S. C. de M. L.; MARTINS, A.; MORETZSOHN, M. de C.; BERTIOLI, D. Global transcriptome analysis of two peanut wild species (Arachis stenosperma and A. duranensis) under biotic and abiotic stress. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 3., 2011, Ilhéus. Resumos... Ribeirão Preto: SBG, 2011. 1 CD-ROM.| Biblioteca(s): Embrapa Semiárido. |
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| 82. | | PETROLI, C. D.; SANSALONI, C. P; CARLING, J.; STEANE, D. A.; VAILLANCOURT, R. E.; MYBURG, A. M.; SILVA JUNIOR, O. B. da; PAPPAS JUNIOR, G. J.; KILIAN, A.; GRATTAPAGLIA, D. Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome. PLoS ONE, v. 7, n. 9, set. 2012.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 83. | | BANDEIRA, G. V. V. M.; BASTOLLA, F. M.; VOM ENDT, D.; KIRCH, R. P.; PIZZOLI, G.; PAPPAS JUNIOR, G. J.; PEREIRA, G. A. G.; GRATTAPAGLIA, D.; CASCARDO, J. C. M.; PASQUALI, G. Projeto genolyptus: análise da expressão diferencial de transcritos de tecidos vasculares de Eucalyptus grandis. In: CONGRESSO BRASILEIRO DE GENÉTICA, 52., 2006, Foz do Iguaçu, PR. Resumos... Ribeirão Preto, SP: Sociedade Brasileira de Genética, 2006. p. 1156.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 84. | | GRATTAPAGLIA, D.; SANSALONI, C. P.; PETROLI, C. D.; FARIA, D. A. de; MISSIAGGIA, A. A.; TAKAHASHI, E. K.; ROSSE, L. N.; PAPPAS JUNIOR, G. J.; RESENDE, M. D. V. de. Quantitative genetics and breeding: from phenotype dissection to genomic selection in Eucalyptus breeding. In: IUFRO TREE BIOTECHNOLOGY CONFERENCE, 2009, Whislter. Abstracts. [S.l.]: IUFRO, 2009. p. 13| Biblioteca(s): Embrapa Florestas. |
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| 85. | | MILLER, R. N. G.; BERTIOLI, D. J.; BAURENS, F. C.; QUIRINO, B. F.; CIAMPI, A. Y.; SANTOS, C. M. R.; MARTINS, N. F.; SOUZA JUNIOR, M. T.; PAPPAS JUNIOR, G. J. Understanding plant responses to biotic stress: ongoing research in Musa. Acta Horticulturae, Leuven, n. 828, p. 255-271, 2009. Edição de Proceedings of the International Symposium on Recent Advances in Banana Crop Protection for Sustainable Production and Improved Livelihoods , White River, South Africa, 2009.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 86. | | PASQUALI, G.; BASTOLLA, F. M.; KIRCH, R. P.; PIZZOLI, G.; ROESLER, G. A.; PAZZINI, F.; CARAZZOLLE, M. F.; BRONDANI, R. V.; COELHO, A. S. G.; BROMMONSCHENKEL, S. H.; PAPPAS JÚNIOR, G. J.; PEREIRA, G. A. G.; CASCARDO, J. C. M.; GRATTAPAGLIA, D. Expressão gênica em Eucalyptus. In: CONGRESSO BRASILEIRO DE GENÉTICA, 51., 2005, Águas de Lindóia, SP. A era da genômica: da bioestatística à bioinformática: anais. Ribeirão Preto, SP: Sociedade Brasileira de Genética, 2005. p. 508.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 87. | | FONSECA, F. C. de A.; FIRMINO, A. A. P.; MACEDO. L. L. P. de; COELHO, R. R.; SOUSA JÚNIOR, J. D. A. de; SILVA JUNIOR, O. B.; TOGAWA, R. C.; PAPPAS JUNIOR, G. J.; GÓIS, L. A. B. de; SILVA, M. C. M. da; SA, M. F. G. de. Sugarcane giant borer transcriptome analysis and identification of genes related to digestion. Plos One, fev., 2015.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 88. | | MILLER, R. N. G.; PASSOS, M. A. N.; IMEDIATO, F. L.; CRUZ, V. O.; TEIXEIRA, C. de C.; FIGUEIREDO, L. F. de A.; MARTINS, N. F.; TOGAWA, R. C.; COSTA, M. M. do C.; SILVA JUNIOR, O. B. da; PAPPAS JUNIOR, G. J. Keynote: understanding plant immunity: transcriptome profiling in Musa-pathogen interactions using next generation sequencing. In: PROMUSA SYMPOSIUM, 2011, Salvador. Bananas and plantains: toward sustainable global production and improved uses: abstracts. [Montepellier.]: [Bioversity International, 2011. p. 116-117.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 89. | | MARTINS, A. C. Q.; MORGANTE, C. V.; SILVA, A. K.; GALHARDO, I. C.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; BERTIOLI, S. C. de M. L.; BERTIOLI, D. J.; MILLER, R. N. G.; BRASILEIRO, A. C. M.; GUIMARAES, P. M. Large scale transcriptome analysis of wild peanut (Arachis stenosperma) inoculated with Passalora personata, the causal agent of late leaf spot. In: INTERNATIONAL CONFERENCE OF THE PEANUT RESEARCH COMMUNITY ON ADVANCES IN ARACHIS THROUGH GENOMICS AND BIOTECNOLOGY, 5., 2011, Brasília, DF. Book of abstracts... Brasília, DF: Embrapa Genetic Researces and Biotecnology, 2011. p. 76.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 90. | | MARTINS, A. C. Q.; MORGANTE, C. V.; SILVA, A. K.; GALHARDO, I. C.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; BERTIOLI, S. C. de M. L.; BERTIOLI, D. J.; MILLER, R. N. G.; BRASILEIRO, A. C. M.; GUIMARAES, P. M. Large scale transcriptome analysis of wild peanut (Arachis stenosperma) inoculated with Passalora personata, the causal agent of late leaf spot. In: INTERNATIONAL CONFERENCE OF THE PEANUT RESEARCH COMMUNITY ON ADVANCES IN ARACHIS THROUGH GENOMICS AND BIOTECNOLOGY, 5., 2011, Brasília, DF. Book of abstracts... Brasília, DF: Embrapa Genetic Researces and Biotecnology, 2011. p. 76.| Biblioteca(s): Embrapa Semiárido. |
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| 91. | | REVERS, L. F.; PORTO, D. D.; FALAVIGNA, V. da S.; BRUNEAU, M.; ANZANELLO, R.; TESSELE, C.; ALENCAR, S. A. de; CZERMAINSKI, A. B. C.; PAPPAS JUNIOR, G. J.; RENOU, J.-P.; FIALHO, F. B.; SANTOS, H. P. dos; DENARDI, F.; KVITSCHAL, M. V.; PASQUALI, G.; MARGIS, M. M. A. N. P.; DELATORRE, C. A.; OLIVEIRA, P. R. D. de. Integrating genetics, genomics and modeling of bud dormancy to improve apple adaptation to climatic changes. In: INTERNATIONAL PLANT DORMANCY SYMPOSIUM, 5., Auckland, 2013. [Abstract and programme book]. [S.l.: ISSS: Plant & Food Research, 2013]. p. 77. Resumo.| Biblioteca(s): Embrapa Uva e Vinho. |
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| 92. | | FARIA, B. M. S. de; MENEZES, I. P. P. de; PAPPAS JÚNIOR, G. J.; VALDISSER, P. A. M. R.; COELHO, G. R. C.; BORBA, T. C. de O.; ABREU, A. G. de; BRONDANI, C.; BARROS, E. G. de; VIANELLO, R. P. Análise da diversidade genética e estruturação populacional entre marcadores SSRs e SNPs em germoplasma de feijoeiro comum (Phaseolus vulgaris L.). In: CONGRESSO BRASILEIRO DE MELHORAMENTO DE PLANTAS, 7., 2013, Uberlândia. Variedade melhorada: a força da nossa agricultura: anais. Viçosa, MG: SBMP, 2013. p. 57-60.| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 93. | | PASSOS, M. A. N.; CRUZ, V. O. de; EMEDIATO, F. L.; TEIXEIRA, C. C. de; AZEVEDO, V. C. R.; BRASILEIRO, A. C. M.; AMORIM, E. P.; FERREIRA, C. F.; MARTINS, N. F.; TOGAWA, R. C.; PAPPAS JÚNIOR, G. J.; SILVA JUNIOR, O. B. da; MILLER, R. T N. G. Analysis of the leaf transcriptome of Musa acuminata during interaction with Mycosphaerella musicola: gene assembly, annotation and marker development. BMC Genomics, v.14, n.78, 2013.| Biblioteca(s): Embrapa Mandioca e Fruticultura; Embrapa Recursos Genéticos e Biotecnologia. |
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| 94. | | BASTOLLA, F. M.; VOM ENDT, D.; JAHNS, M.; PIZZOLI, G.; PAZZINI, F.; KIRCH, R. P.; CARAZZOLE, M. F.; BRONDANI, R. V.; COELHO, A. S. G.; BROMMONSCHENKEL, S. H.; PAPPAS JUNIOR, G. J.; PEREIRA, G. A. G.; GRATTAPAGLIA, D.; CASCARDO, J. C. M.; PASQUALI, G. Differential gene expression in two Eucalyptus species. In: CONGRESSO BRASILEIRO DE GENÉTICA, 52., 2006, Foz do Iguaçu, PR. Resumos... Ribeirão Preto, SP: Sociedade Brasileira de Genética, 2006. p. 1123.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 95. | | BENEVENTI, M. A.; SILVA JUNIOR, O. B. da; SÁ, M. E. L. de; FIRMINO, A. A. P.; AMORIM, R. M. S. de; ALBUQUERQUE, E. V. S.; SILVA, M. C. M. da; SILVA, J. P. da; CAMPOS, M. de A.; LOPES, M. J. C.; TOGAWA, R. C.; PAPPAS JÚNIOR, G. J.; GROSSI DE SÁ, M. F. Transcription profile of soybean-root-knot nematode interaction reveals a key role of phythormones in the resistance reaction. BMC Genomics, v. 14: 322, 2013.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 96. | | FIRMINO, A. A. P.; FONSECA, F. C. de A.; MACEDO, L. L. P. de; COELHO, R. R.; SOUZA JÚNIOR, J. D. A. de; TOGAWA, R. C.; SILVA JUNIOR, O. B. da; PAPPAS JÚNIOR, G. J.; SILVA, M. C. M. da; ENGLER, G.; GROSI DE SÁ, M. F. Transcriptome analysis in cotton Boll Weevil (Anthonomus grandis) and RNA interference in insect pests. Plos One, v. 8, n. 12, e85079, 2013.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 97. | | FERREIRA, C. F.; AMORIM, E. P.; SILVA, P. H.; SANTOS, V. J.; VILARINHOS, A. D.; CIAMPI, A. Y.; PAPPAS JUNIOR, G. J.; PAPPAS, M. de C. R.; SOUZA JUNIOR, M. T.; SANTOS, V. J. dos; MILLER, R. N. G; AZEVEDO, V. C. R. Optimization and validation of SSR Markers in banana. In: INTERNATIONAL HORTICULTURAL CONGRESS, 28., 2010, Lisboa. Science and horticulture for people: programme & book of abstracts. Lisboa: ISHS, 2010. 1 CD-ROM. 2 p.759. PDF. S18.208.| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 98. | | GUIMARAES, P. M.; BRASILEIRO, A. C. M.; MORGANTE, C. V.; MARTINS, A. C. Q.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; TOGAWA, R. C.; BERTIOLI, S. C. de M. L.; ARAUJO, A. C. G. de; MORETZSOHN, M. de C.; BERTIOLI, D. J. Global transcriptome analysis of two wild relatives of peanut under drought and fungi infection. BMC Genomics, v. 13, n. 387, 2012.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 99. | | RESENDE, M. D. V. de; RESENDE JUNIOR, M. F. R.; SANSALONI, C. P.; PETROLI, C. D.; MISSIAGGIA, A. A.; AGUIAR, A. M.; ABAD, J. M.; TAKAHASHI, E. K.; ROSADO, A. M.; FARIA, D. A.; PAPPAS JUNIOR, G. J.; KILIAN, A.; GRATTAPAGLIA, D. Genomic selection for growth and wood quality in Eucalyptus: capturing the missing heritability and accelerating breeding for complex traits in forest trees. New Phytologist, v. 194, p. 116-128, 2012.| Biblioteca(s): Embrapa Florestas; Embrapa Recursos Genéticos e Biotecnologia. |
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| 100. | | KIRCH, R. P.; SCHWAMBACH, J.; BASTOLLA, F. M.; PAZZINI, F.; PIZZOLI, G.; ROESLER, G. A.; MIRANDA, R. P.; CARAZZOLLE, M. F.; BRONDANI, R. V.; COELHO, A. S. G.; GRATTAPAGLIA, D.; BROMMONSCHENKEL, S. H.; PAPPAS JÚNIOR, G. J.; PEREIRA, G. A. G.; FETT-NETO, A. G.; CASCARDO, J. C. M.; PASQUALI, G. Projeto Genolyptus: seqüenciamento e análise de transcritos de plântulas de Eucalyptus grandis submetidos a diferentes estímulos. In: CONGRESSO BRASILEIRO DE GENÉTICA, 51., 2005, Águas de Lindóia, SP. A era da genômica: da bioestatística à bioinformática: anais. Ribeirão Preto, SP: Sociedade Brasileira de Genética, 2005. p. 528.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| Registros recuperados : 108 | |
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 | Acesso ao texto completo restrito à biblioteca da Embrapa Arroz e Feijão. Para informações adicionais entre em contato com cnpaf.biblioteca@embrapa.br. |
Registro Completo
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Biblioteca(s): |
Embrapa Arroz e Feijão. |
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Data corrente: |
17/02/2016 |
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Data da última atualização: |
17/02/2016 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
MÜLLER, B. S. F.; PAPPAS JUNIOR, G. J.; VALDISSER, P. A. M. R.; COELHO, G. R. C.; MENEZES, I. P. P. de; ABREU, A. G.; BORBA, T. C. O.; SAKAMOTO, T.; BRONDANI, C.; BARROS, E. G.; VIANELLO, R. P. |
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Afiliação: |
BARBARA S. F. MÜLLER, BIOAGRO; GEORGIOS J. PAPPAS JUNIOR, UNB; PAULA ARIELLE M RIBEIRO VALDISSER, CNPAF; GESIMARIA RIBEIRO COSTA COELHO, CNPAF; IVANDILSON P. P. DE MENEZES, INSTITUTO FEDERAL GOIANO, Urutaí-GO; ALUANA GONCALVES DE ABREU, CNPAF; TEREZA CRISTINA DE OLIVEIRA BORBA, CNPAF; TETSU SAKAMOTO, UFMG; CLAUDIO BRONDANI, CNPAF; EVERALDO G. BARROS, BIOAGRO; ROSANA PEREIRA VIANELLO, CNPAF. |
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Título: |
An operational SNP panel integrated to SSR marker for the assessment of genetic diversity and population structure of the common bean. |
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Ano de publicação: |
2015 |
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Fonte/Imprenta: |
Plant Molecular Biology Reporter, v. 33, n. 6, p. 1697-1711, Dec. 2015. |
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DOI: |
10.1007/s11105-015-0866-x |
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Idioma: |
Inglês |
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Conteúdo: |
The common bean, an important source of protein and minerals for humans, complements cereals both nutritionally and as a rotation crop, supplying nitrogen and reducing soil pathogens. The aim of this study was to develop an operational SNP-based panel for common bean in order to facilitate SSR employment in genetic diversity and population structure analyses, and its use in breeding programs. A set of 88 diverse and important common bean cultivars/lines (53), landraces (33) and wild accessions (2) were genotyped. Overall, the 58 SSRs performed better at evaluating genetic diversity (Ā=7.38; He=58.7 %; PI=1.20E−45) than the 345 SNPs, of which the SSRs dinucleotides (SSR-di) were more informative (Ā=9.92; He=72.5 %; PI=3.40E−26) and a selected set of 13 SSRs (Ā=15.31/locus; He=84.5 %; PI=1.03E−19) allowed for the discrimination of all individuals. For the 345 high-quality scored SNPs a low combined PI (4.70E −119) and high PE (100 %) was obtained for the assessment of parentage and identity. The SNPs were very useful for linkage mapping in inter- (78.2 %) and intra-gene pool (17.7 %) crosses. Both markers afforded high resolution detection of inter-gene pool structure, with greater differentiation based on SNPs (K=2, FST=0.759). The SSRs-di differentiated cultivars/lines and landraces (K=3) of Mesoamerican origin. A set of 16 SSRs was selected to establish a routine and operational analysis of Genbank accessions allowing an efficient origin-based discrimination of common bean accessions. Operational genotyping panels based on SSRs and SNPs were derived, contributing to the growing integration of genomics with molecular breeding programs of the common bean. MenosThe common bean, an important source of protein and minerals for humans, complements cereals both nutritionally and as a rotation crop, supplying nitrogen and reducing soil pathogens. The aim of this study was to develop an operational SNP-based panel for common bean in order to facilitate SSR employment in genetic diversity and population structure analyses, and its use in breeding programs. A set of 88 diverse and important common bean cultivars/lines (53), landraces (33) and wild accessions (2) were genotyped. Overall, the 58 SSRs performed better at evaluating genetic diversity (Ā=7.38; He=58.7 %; PI=1.20E−45) than the 345 SNPs, of which the SSRs dinucleotides (SSR-di) were more informative (Ā=9.92; He=72.5 %; PI=3.40E−26) and a selected set of 13 SSRs (Ā=15.31/locus; He=84.5 %; PI=1.03E−19) allowed for the discrimination of all individuals. For the 345 high-quality scored SNPs a low combined PI (4.70E −119) and high PE (100 %) was obtained for the assessment of parentage and identity. The SNPs were very useful for linkage mapping in inter- (78.2 %) and intra-gene pool (17.7 %) crosses. Both markers afforded high resolution detection of inter-gene pool structure, with greater differentiation based on SNPs (K=2, FST=0.759). The SSRs-di differentiated cultivars/lines and landraces (K=3) of Mesoamerican origin. A set of 16 SSRs was selected to establish a routine and operational analysis of Genbank accessions allowing an efficient orig... Mostrar Tudo |
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Palavras-Chave: |
Diversity pattern; Genetic structure; Molecular breeding. |
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Thesagro: |
Feijão; Phaseolus vulgaris; Variação genética. |
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Categoria do assunto: |
S Ciências Biológicas |
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Marc: |
LEADER 02750naa a2200325 a 4500
001 2037381
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008 2015 bl uuuu u00u1 u #d
024 7 $a10.1007/s11105-015-0866-x$2DOI
100 1 $aMÜLLER, B. S. F.
245 $aAn operational SNP panel integrated to SSR marker for the assessment of genetic diversity and population structure of the common bean.$h[electronic resource]
260 $c2015
520 $aThe common bean, an important source of protein and minerals for humans, complements cereals both nutritionally and as a rotation crop, supplying nitrogen and reducing soil pathogens. The aim of this study was to develop an operational SNP-based panel for common bean in order to facilitate SSR employment in genetic diversity and population structure analyses, and its use in breeding programs. A set of 88 diverse and important common bean cultivars/lines (53), landraces (33) and wild accessions (2) were genotyped. Overall, the 58 SSRs performed better at evaluating genetic diversity (Ā=7.38; He=58.7 %; PI=1.20E−45) than the 345 SNPs, of which the SSRs dinucleotides (SSR-di) were more informative (Ā=9.92; He=72.5 %; PI=3.40E−26) and a selected set of 13 SSRs (Ā=15.31/locus; He=84.5 %; PI=1.03E−19) allowed for the discrimination of all individuals. For the 345 high-quality scored SNPs a low combined PI (4.70E −119) and high PE (100 %) was obtained for the assessment of parentage and identity. The SNPs were very useful for linkage mapping in inter- (78.2 %) and intra-gene pool (17.7 %) crosses. Both markers afforded high resolution detection of inter-gene pool structure, with greater differentiation based on SNPs (K=2, FST=0.759). The SSRs-di differentiated cultivars/lines and landraces (K=3) of Mesoamerican origin. A set of 16 SSRs was selected to establish a routine and operational analysis of Genbank accessions allowing an efficient origin-based discrimination of common bean accessions. Operational genotyping panels based on SSRs and SNPs were derived, contributing to the growing integration of genomics with molecular breeding programs of the common bean.
650 $aFeijão
650 $aPhaseolus vulgaris
650 $aVariação genética
653 $aDiversity pattern
653 $aGenetic structure
653 $aMolecular breeding
700 1 $aPAPPAS JUNIOR, G. J.
700 1 $aVALDISSER, P. A. M. R.
700 1 $aCOELHO, G. R. C.
700 1 $aMENEZES, I. P. P. de
700 1 $aABREU, A. G.
700 1 $aBORBA, T. C. O.
700 1 $aSAKAMOTO, T.
700 1 $aBRONDANI, C.
700 1 $aBARROS, E. G.
700 1 $aVIANELLO, R. P.
773 $tPlant Molecular Biology Reporter$gv. 33, n. 6, p. 1697-1711, Dec. 2015.
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