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Registro Completo |
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Biblioteca(s): |
Embrapa Gado de Leite. |
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Data corrente: |
18/12/2018 |
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Data da última atualização: |
24/01/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
ZANELLA, R.; LAGO, L. V.; SILVA, A. N. da; PÉRTILLE, F.; CARVALHO, N. S. de; PANETTO, J. C. do C.; ZANELLA, G. C.; FACIOLI, F. L.; SILVA, M. V. G. B. |
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Afiliação: |
RICARDO ZANELLA, Universidade de Passo Fundo; LUÍSA V. LAGO, Universidade de Passo Fundo; ARTHUR N. DA SILVA, Universidade de Passo Fundo; FÁBIO PÉRTILLE, ESALQ/USP; NATHÃ S. de CARVALHO, UFRGS; JOAO CLAUDIO DO CARMO PANETTO, CNPGL; GIOVANA C. ZANELLA, Universidade de Passo Fundo; FERNANDA L. FACIOLI, Universidade de Passo Fundo; MARCOS VINICIUS GUALBERTO B SILVA, CNPGL. |
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Título: |
Genetic characterization of Indubrasil cattle breed population. |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
Veterinary Sciences, v. 5, n. 4, 2018. |
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Páginas: |
10 p. |
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DOI: |
10.3390/vetsci5040098 |
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Idioma: |
Inglês |
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Conteúdo: |
Abstract The Indubrasil breed was developed in the Brazilian region called Triângulo Mineiro as a result of a cross between zebu cattle. Initially, it was used as a terminal cross and currently it represents approximately 4.45% of all the Brazilian zebu cattle. Studies were conducted to estimate genetic parameters in the Indubrasil using pedigree information, however, until now, no study has been developed using large-scale genomic markers in this breed. Pedigree information are widely used to investigate population parameters; however, they can neglect some estimates when compared to the use of genomic markers. Therefore, the objective of this study was to investigate the population structure and the genetic diversity of Indubrasil cattle using a high-density Single Nucleotide Polymorphism (SNP) panel (Illumina BovineHD BeadChip 700k). Levels of genomic homozygosity were evaluated using three different approaches: Runs of homozygosity (FROH), % of homozygosis (FSNP), and inbreeding coefficient (Fx). Further, Runs of Homozygosity (ROH) segments conserved among the animals were investigated to identify possible regions associated with the breed characteristics. Our results indicate that even the Indubrasil breed having a small effective population size, the levels of homozygosity (FROH = 0.046) are still small. This was possibly caused by the cross conducted among different breeds for its development. It suggests no immediate risks associated with loss of genetic variation. This information might be used in breeding programs, for the breed conservation and for the expansion of the Indubrasil breed. MenosAbstract The Indubrasil breed was developed in the Brazilian region called Triângulo Mineiro as a result of a cross between zebu cattle. Initially, it was used as a terminal cross and currently it represents approximately 4.45% of all the Brazilian zebu cattle. Studies were conducted to estimate genetic parameters in the Indubrasil using pedigree information, however, until now, no study has been developed using large-scale genomic markers in this breed. Pedigree information are widely used to investigate population parameters; however, they can neglect some estimates when compared to the use of genomic markers. Therefore, the objective of this study was to investigate the population structure and the genetic diversity of Indubrasil cattle using a high-density Single Nucleotide Polymorphism (SNP) panel (Illumina BovineHD BeadChip 700k). Levels of genomic homozygosity were evaluated using three different approaches: Runs of homozygosity (FROH), % of homozygosis (FSNP), and inbreeding coefficient (Fx). Further, Runs of Homozygosity (ROH) segments conserved among the animals were investigated to identify possible regions associated with the breed characteristics. Our results indicate that even the Indubrasil breed having a small effective population size, the levels of homozygosity (FROH = 0.046) are still small. This was possibly caused by the cross conducted among different breeds for its development. It suggests no immediate risks associated with loss of genetic variation. T... Mostrar Tudo |
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Palavras-Chave: |
Genetic diversity; Indubrasil; SNPs. |
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Thesaurus Nal: |
Inbreeding; Pedigree. |
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Categoria do assunto: |
L Ciência Animal e Produtos de Origem Animal |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/188795/1/Artigo-VetSciences-Panetto-Genetic.pdf
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Marc: |
LEADER 02429naa a2200301 a 4500
001 2101944
005 2023-01-24
008 2018 bl uuuu u00u1 u #d
024 7 $a10.3390/vetsci5040098$2DOI
100 1 $aZANELLA, R.
245 $aGenetic characterization of Indubrasil cattle breed population.$h[electronic resource]
260 $c2018
300 $a10 p.
520 $aAbstract The Indubrasil breed was developed in the Brazilian region called Triângulo Mineiro as a result of a cross between zebu cattle. Initially, it was used as a terminal cross and currently it represents approximately 4.45% of all the Brazilian zebu cattle. Studies were conducted to estimate genetic parameters in the Indubrasil using pedigree information, however, until now, no study has been developed using large-scale genomic markers in this breed. Pedigree information are widely used to investigate population parameters; however, they can neglect some estimates when compared to the use of genomic markers. Therefore, the objective of this study was to investigate the population structure and the genetic diversity of Indubrasil cattle using a high-density Single Nucleotide Polymorphism (SNP) panel (Illumina BovineHD BeadChip 700k). Levels of genomic homozygosity were evaluated using three different approaches: Runs of homozygosity (FROH), % of homozygosis (FSNP), and inbreeding coefficient (Fx). Further, Runs of Homozygosity (ROH) segments conserved among the animals were investigated to identify possible regions associated with the breed characteristics. Our results indicate that even the Indubrasil breed having a small effective population size, the levels of homozygosity (FROH = 0.046) are still small. This was possibly caused by the cross conducted among different breeds for its development. It suggests no immediate risks associated with loss of genetic variation. This information might be used in breeding programs, for the breed conservation and for the expansion of the Indubrasil breed.
650 $aInbreeding
650 $aPedigree
653 $aGenetic diversity
653 $aIndubrasil
653 $aSNPs
700 1 $aLAGO, L. V.
700 1 $aSILVA, A. N. da
700 1 $aPÉRTILLE, F.
700 1 $aCARVALHO, N. S. de
700 1 $aPANETTO, J. C. do C.
700 1 $aZANELLA, G. C.
700 1 $aFACIOLI, F. L.
700 1 $aSILVA, M. V. G. B.
773 $tVeterinary Sciences$gv. 5, n. 4, 2018.
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Registro original: |
Embrapa Gado de Leite (CNPGL) |
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Biblioteca |
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| Registros recuperados : 48 | |
| 24. |  | BALBINO, L. C.; MOREIRA, J. A. A.; SILVA, J. G. da; OLIVEIRA, E. F. de; OLIVEIRA, I. P. de. Plantio direto. In: ARAUJO, R. S.; RAVA, C. A.; STONE, L. F.; ZIMMERMANN, M. J. de O. (Coord.). Cultura do feijoeiro comum no Brasil. Piracicaba: POTAFOS, 1996. p. 301-352.| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 26. | | SOUZA, G. N. de; GREGO, C. R.; HOTT, M. C.; OLIVEIRA, E. F. DE; HYLARIO, S. M.; MENDONCA, L. C.; SILVA, M. R. Análise espacial da contagem de células somáticas dos rebanhos da Associação dos Criadores de Gado Holandês de Minas Gerais. In: CONGRESSO BRASILEIRO DE QUALIDADE DO LEITE, 5., 2013, Botucatu. Anais. Curitiba: Conselho Brasileiro de Qualidade do Leite, 2013. p. 269-270.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Leite. |
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| 27. | | MARCHIORO, V. S.; FRANCO, F. de A.; NORA, T. D.; OLIVEIRA, E. F. de; SCHUSTER, I.; VIEIRA, E. S. N.; EVANGELISTA, A. CD 117: nova cultivar de trigo de ampla adaptação. Pesquisa Agropecuária Brasileira, Brasília, DF, v. 44, n. 4, p. 424-426, abr. 2009 Notas Científicas.
Título em inglês: CD 117: new wheat cultivar with wide adaptation.| Biblioteca(s): Embrapa Unidades Centrais. |
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| 28. | | SOUZA, G. N. de; OLIVEIRA, E. F. DE; BRITO, M. A. V. P. e; LANGE, C. C.; HYLARIO, S. M.; REIS, R. A.; SILVA, M. R. Estimativa da prevalência de Staphylococcus aureus e Streptococcus agalactiae nos rebanhos da Associação dos Criadores de Gado Holandês de Minas Gerais, Brasil, 2011/2012. In: CONGRESSO INTERNACIONAL DO LEITE, 11.; WORKSHOP DE POLÍTICAS PÚBLICAS, 11.; SIMPÓSIO DE SUSTENTABILIDADE DA ATIVIDADE LEITEIRA, 12., 2012, Goiânia. Anais... Juiz de Fora: Embrapa Gado de Leite, 2012.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Leite. |
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| 29. | | OLIVEIRA, E. F. DE; BRITO, M. A. V. P. e; LANGE, C. C.; HYLARIO, S. M.; BRUNO, A. F.; SILVA, M. R.; SOUZA, G. N. de. Estimate of Staphylococcus aureus and Streptococcus agalactiae prevalence among dairy herds from Minas Gerais Holstein Dairy Association, Brazil, 2011/2012. In: NATIONAL MASTITIS COUNCIL ANNUAL MEETING, 52, 2013, San Diego. Proceedings... San Diego: [s.n.], 2013. p. 209-210.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Leite. |
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| 30. | | SOUZA, G. N. de; OLIVEIRA, E. F. DE; BRITO, M. A. V. P. e; LANGE, C. C.; HYLARIO, S. M.; REIS, R. A.; OLIVEIRA, M. R. de. Estimate of Staphylococcus aureus and Streptococcus agalactiae prevalence among dairy herds from Minas Gerais holstein dairy farmers association, Brazil, 2011/2012. In: CONGRESSO INTERNACIONAL DO LEITE, 11.; WORKSHOP DE POLÍTICAS PÚBLICAS, 11.; SIMPÓSIO DE SUSTENTABILIDADE DA ATIVIDADE LEITEIRA, 12., 2012, Goiânia. Anais... Juiz de Fora: Embrapa Gado de Leite, 2012.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Leite. |
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| 34. | | PRUSKI, F. F.; VENDRAME, V.; OLIVEIRA, E. F. de; BALBINO, L. C.; FERREIRA, P. A.; WERLANG, L.; CARVALHO, L. T. de. Infiltração da água num latossolo roxo. Pesquisa Agropecuária Brasileira, v. 32, n. 1, p. 77-84, jan. 1997.| Tipo: Artigo em Periódico Indexado |
| Biblioteca(s): Embrapa Arroz e Feijão; Embrapa Unidades Centrais. |
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| 36. | | BAIRRAO, J. F. M.; OLIVEIRA, M. A. R. de; OLIVEIRA, E. F. de; SANTOS, B.; YORINORI, J. T.; GAUDENCIO, C. de A. Rotacao e sucessao de culturas com a soja, no sistema de semeadura direta, em Cascavel, PR. In: EMBRAPA. Centro Nacional de Pesquisa de Soja (Londrina, PR). Resultados de pesquisa de soja 1988/89. Londrina, 1989. p.249-252. (EMBRAPA-CNPSo. Documentos, 43).| Biblioteca(s): Embrapa Soja. |
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| 37. | | CHAGAS, J. F. R.; SANTOS, G. R. dos; COSTA, R. V. da; DALCIN, M. S.; OLIVEIRA, E. F. de; CASTRO NETO, M. D. de. Severidade de doenças no milho sob efeito do alto e baixo nitrogênio em cobertura. In: CONGRESSO NACIONAL DE MILHO E SORGO, 30.; SIMPÓSIO SOBRE LEPDÓPTEROS COMUNS A MILHO, SOJA E ALGODÃO, 1., 2014, Salvador. Eficiência nas cadeias produtivas e o abastecimento global: resumos expandidos. Sete Lagoas: Associação Brasileira de Milho e Sorgo, 2014. 1 CD-ROM.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 38. | | SCUDELETTI, D.; CRUSCIOLL, C. A. C.; BOSSOLANI, J. W.; MORETTI, L. G.; MOMESSO, L.; TUBAÑA, B. S.; CASTRO, S. G. Q. de; OLIVEIRA, E. F. de; HUNGRIA, M. Trichoderma asperellum inoculation as a tool for attenuating drought stress in sugarcane. Frontiers in Plant Science, v. 12, article 645542, 2021. 13 p.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Soja. |
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| 39. | | SOUZA, G. N. de; GREGO, C. R.; HOTT, M. C.; SILVA, M. R.; CARVALHO, W. A.; HYLARIO, S. M.; AMARAL, C. M.; OLIVEIRA, E. F. DE. Spatial analysis of bulk tank milk somatic cell counts from dairy herds located in Brazil Southeast Region, 2011. In: CONGRESSO INTERNACIONAL DO LEITE, 11.; WORKSHOP DE POLÍTICAS PÚBLICAS, 11.; SIMPÓSIO DE SUSTENTABILIDADE DA ATIVIDADE LEITEIRA, 12., 2012, Goiânia. Anais... Juiz de Fora: Embrapa Gado de Leite, 2012.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Leite. |
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| 40. | | SOUZA, G. N. de; GREGO, C. R.; HOTT, M. C.; SILVA, M. R.; CARVALHO, W. A.; HYLARIO, S. M.; AMARAL, C. M.; OLIVEIRA, E. F. DE. Spatial analysis of bulk tank milk somatic cell counts from dairy herds located in southeast region of Brazil, 2011. In: NATIONAL MASTITIS COUNCIL ANNUAL MEETING, 52, 2013, San Diego. Proceedings... San Diego: [s.n.], 2013. p. 207-208.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Leite. |
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| Registros recuperados : 48 | |
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