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| Registros recuperados : 136 | |
| 101. |  | MARTINS, A. C. Q.; MORGANTE, C. V.; SANTOS, C. M. R.; SILVA, F. R. da; ARAÚJO, A. C. G.; BERTIOLI, D. J.; BERTIOLI, S. C. de M. L.; GUIMARAES, P. M.; BRASILEIRO, A. C. M. A transcriptional approach for identifying genes related to drought stress. In: INTERNATIONAL CONFERENCE OF THE PEANUT RESEARCH COMMUNITY ON ADVANCES IN ARACHIS THROUGH GENOMICS AND BIOTECNOLOGY, 5., 2011, Brasília, DF. Book of abstracts... Brasília, DF: Embrapa Genetic Researces and Biotecnology, 2011. p. 77. Poster.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 102. | | MARTINS, A. C. Q.; MORGANTE, C. V.; SANTOS, C. M. R.; SILVA, F. R. da; ARAÚJO, A. C. G.; BERTIOLI, D. J.; BERTIOLI, S. C. de M. L.; GUIMARAES, P. M.; BRASILEIRO, A. C. M. A transcriptional approach for identifying genes related to drought stress. In: INTERNATIONAL CONFERENCE OF THE PEANUT RESEARCH COMMUNITY ON ADVANCES IN ARACHIS THROUGH GENOMICS AND BIOTECNOLOGY, 5., 2011, Brasília, DF. Book of abstracts... Brasília, DF: Embrapa Genetic Researces and Biotecnology, 2011. p. 77.| Biblioteca(s): Embrapa Semiárido. |
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| 103. | | BRASILEIRO, A. C. M.; MORGANTE, C. V.; BERTIOLI, S. C. de M. L.; ARAUJO, A. C. G. de; PAPPAS, G.; SILVA JUNIOR, O. B. da; MARTINS, A. C. Q.; BERTIOLI, D.; GUIMARAES, P. M. Transcriptome analysis in response to gradual water deficit in Arachis wild relatives. In: INTERNATIONAL CONFERENCE ON LEGUME GENETICS AND GENOMICS, 6., 2012, Hyderabad, India. Programe & abstract book... Hyderabad: ICRISAT, 2012.| Biblioteca(s): Embrapa Semiárido. |
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| 104. | | MARTINS, A. C. Q.; MORGANTE, C. V.; SANTOS, C. M. R.; DA SILVA, F. R.; LEAL BERTIOLI, S. C. M.; BERTIOLI, D. J.; GUIMARÃES, P. M.; BRASILEIRO, A. C. M. Transcriptome analysis of wild Arachis under drought stress. In: CONGRESSO BRASILEIRO DE GENÉTICA, 54., 2008, Salvador. Resumos... Salvador: SBG, 2008. p. 305. 1 CD-ROM.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 105. | | BRASILEIRO, A. C. M.; BERTIOLI, S. C. de M. L.; MORGANTE, C. V.; MARTINS, A. C. Q.; SANTOS, C. M. R.; ARAUJO, A. C. G. de; SILVA, F. R.; BERTIOLI, D. J.; GUIMARAES, P. M. Transcriptome analysis of wild Arachis under water stress. In: INTERNATIONAL CONFERENCE OF THE PEANUT RESEARCH COMMUNITY, 4, 2009, Mali, África. Advances in Arachis through genomics and biotechnology (AAGB-2009). Mali: International Crops Research Institute for the Semi-Arid Tropics, 2009.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 106. | | ARAUJO, A. C. G. de; GUIMARAES, P. M.; MORGANTE, C. V.; GUIMARÃES, L. A.; SILVA JUNIOR, O. B. da; ROBERTS, P. A.; BERTIOLI, S. C. de M. L.; BERTIOLI, D.; BRASILEIRO, A. C. M. A survey of differentially expressed genes in resistant wild arachis during nematode infection. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 4., 2013, Bento Gonçalves. Resumos... Bento Gonçalves: SBG, 2013. p. 58.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 107. | | ARAUJO, A. C. G. de; MORGANTE, C. V.; GUIMARAES, P. M.; SILVA JUNIOR, O. B. da; ROBERTS, P. A.; BERTIOLI, S. C. de M. L.; BERTIOLI, D.; BRASILEIRO, A. C. M. A survey of differentially expressed genes in resistant wild arachis during nematode infection. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 4., 2013, Bento Gonçalves. Resumos... Bento Gonçalves: SBG, 2013. p. 58.| Biblioteca(s): Embrapa Semiárido. |
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| 108. | | MORGANTE, C. V.; BRASILEIRO, A. C. M.; ROBERTS, P. A.; GUIMARAES, L. A.; ARAUJO, A. C. G. de; FONSECA, L. N.; BERTIOLI, S. C. de M. L.; BERTIOLI, D. J.; GUIMARAES, P. M. A survey of genes involved in Arachis stenosperma resistance to Meloidogyne arenaria race 1. Functional Plant Biology, v. 41, p. 1298-1309, 2013.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia; Embrapa Semiárido. |
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| 109. | | MORGANTE, C. V.; BRASILEIRO, A. C. M.; ROBERTS, P. A.; GUIMARÃES, L. A.; FONSECA, L. N.; ARAUJO, A. C. G. de; BERTIOLI, S. C. de M. L.; BERTIOLI, D. J.; GUIMARAES, P. M. A survey of genes potentially involved in Arachis stenosperma resistance to Meloidogyne arenaria race In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 4., 2013, Bento Gonçalves. Resumos... Bento Gonçalves: SBG, 2013. p. 51.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 110. | | MORGANTE, C. V.; BRASILEIRO, A. C. M.; ROBERTS, P. A.; GUIMARÃES, L. A.; FONSECA, L. N.; ARAUJO, A. C. G. de; BERTIOLI, S. C. de M. L.; BERTIOLI, D. J.; GUIMARAES, P. M. A survey of genes potentially involved in Arachis stenosperma resistance to Meloidogyne arenaria race. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 4., 2013, Bento Gonçalves. Resumos... Bento Gonçalves: SBG, 2013. p. 51.| Biblioteca(s): Embrapa Semiárido. |
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| 111. | | MELO, B. P. de; LOURENCO-TESSUTTI, I. T.; MORGANTE, C. V.; SANTOS, N. C.; PINHEIRO, L. B.; LINS, C. B. de J.; SILVA, M. C. M.; MACEDO, L. L. P.; FONTES, E. P. B.; GROSSI-DE-SA, M. F. Soybean embryonic axis transformation: combining biolistic and Agrobacterium-Mediated Protocols to overcome typical complications of in vitro plant regeneration. Frontiers in Plant Science, v. 11, article 1228, 2020.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia; Embrapa Semiárido. |
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| 112. | | COSTA, L. S. de L.; ALVES, N. S. de F.; PINTO, C. E. M.; FLORENTINO, L. H.; MELO, B. P. de; MOREIRA, V. J. V.; SÁ, M. E. L. de; ARRAES, F. B. M.; RECH FILHO, E. L.; MORGANTE, C. V.; SA, M. F. G. de. Depleção do quadro de leitura upstream como nova estratégia para manipular a tradução de gmpr10 usando crispr/cas9 para aumentar a tolerância da soja a fitonematoides. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 8, 2023, Florianópolis, SC. Anais... Florianópolis: SBG, 2023. p. 131.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 113. | | COSTA, L. S. de L.; ALVES, N. S. de F.; PINTO, C. E. M.; FLORENTINO, L. H.; MELO, B. P. de; MOREIRA, V. J. V.; SÁ, M. E. L. de; ARRAES, F. B. M.; RECH FILHO, E. L.; MORGANTE, C. V.; SA, M. F. G. de. Depleção do quadro de leitura upstream como nova estratégia para manipular a tradução de gmpr10 usando crispr/cas9 para aumentar a tolerância da soja a fitonematoides. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 8, 2023, Florianópolis, SC. Anais... Florianópolis: SBG, 2023. p. 131.| Biblioteca(s): Embrapa Semiárido. |
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| 114. | | RIBEIRO, T. P.; MARTINS-DE-SA, D.; MACEDO, L. L. P. de; LOURENCO, I. T.; RUFFO, G. C.; SOUSA, J. P. A.; SANTANA, J. M. do R.; OLIVEIRA-NETO, O. B.; MOURA, S. M.; SILVA, M. C. M. da; MORGANTE, C. V.; OLIVEIRA, N. G. de; BASSO, M. F.; SA, M. F. G. de. Cotton plants overexpressing the Bacillus thuringiensis Cry23Aa and Cry37Aa binary-like toxins exhibit high resistance to the cotton boll weevil (Anthonomus grandis). Plant Science, v. 344, 112079, 2024. Na publicação: Leonardo Lima Pepino Macedo; Isabela Tristan Lourenço-Tessutti; Maria Cristina Mattar Silva; Maria Fatima Grossi-de-Sa.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 115. | | MOREIRA, V. J. V.; LOURENCO, I. T.; BASSO, M. F.; LISEI-DE-SA, M. E.; MORGANTE, C. V.; PAES-DE-MELO, B.; ARRAES, F. B. M.; MARTINS-DE-SA, D.; SILVA, M. C. M. da; ENGLER, J. de A.; SA, M. F. G. de. Minc03328 effector gene downregulation severely affects Meloidogyne incognita parasitism in transgenic Arabidopsis thaliana. Planta, v. 255,44, 2022. Na publicação: Isabela Tristan Lourenço-Tessutti; Maria Cristina Mattar Silva; Maria Fatima Grossi-de-Sa.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 116. | | MOREIRA, V. J. V; LOURENCO, I. T.; BASSO, M. F.; SÁ. M. E. L. de; MORGANTE, C. V.; MELO, B. P.; ARRAES, F. B. M.; SÁ, D. M. de; SILVA, M. C. M. da; ENGLER, J. de A.; SA, M. F. G. de. Minc03328 effector gene down regulation severely affects Meloidogyne incognita parasitism in transgenic Arabidopsis thaliana. Planta, v. 255, n. 2, 2022.| Biblioteca(s): Embrapa Semiárido. |
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| 117. | | SANTOS, J. W. M. dos; SILVA, J. F. da; FERREIRA, T. D. dos S.; DIAS, M. A. M.; FRAIZ, A. C. R.; ESCOBAR, I. E. C.; SANTOS, R. C. dos; LIMA, L. M. de; MORGANTE, C. V.; FERNANDES JUNIOR, P. I. Molecular and symbiotic characterization of peanut bradyrhizobia from the semi-arid region of Brazil. Applied Soil Ecology, v. 121, p. 177-184, 2017.| Biblioteca(s): Embrapa Algodão; Embrapa Semiárido. |
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| 118. | | FREITA, E. O.; MELO, B. P.; LOURENCO-TESSUTTI, I. T.; ARRAES, F. B. M.; AMORIM, R. M.; LISEI-DE-SÁ, M. E.; COSTA, J. A.; LEITE, A. G. B.; FAHEEM, M.; FERREIRA, M. A.; MORGANTE, C. V.; FONTES, E. P. B.; GROSSI-DE-SA, M. F. Identification and characterization of the GmRD26 soybean promoter in response to abiotic stresses: potential tool for biotechnological application. BMC Biotechnology, v. 19, article 79, 2019.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia; Embrapa Semiárido. |
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| 119. | | GUIMARAES, P. M.; BRASILEIRO, A. C. M.; MORGANTE, C. V.; MARTINS, A. C. Q.; PAPPAS JUNIOR, G. J.; SILVA JUNIOR, O. B. da; TOGAWA, R. C.; BERTIOLI, S. C. de M. L.; ARAUJO, A. C. G. de; MORETZSOHN, M. de C.; BERTIOLI, D. J. Global transcriptome analysis of two wild relatives of peanut under drought and fungi infection. BMC Genomics, v. 13, n. 387, 2012.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 120. | | MOREIRA-PINTO, C. E.; COELHO, R. R.; LEITE, A. G. B.; SILVEIRA, D. A.; SOUZA, D. A.; LOPES, R. B.; MACEDO, L. L. P. de; SILVA, M. C. M. da; RIBEIRO, T. P.; MORGANTE, C. V.; ANTONINO, J. D.; SA, M. F. G. de. Increasing Anthonomus grandis susceptibility to Metarhizium anisopliae through RNAi-induced AgraRelish knockdown: a perspective to combine biocontrol and biotechnology. Pest Management Science, v. 77, n. 9, p. 4054-4063, 2021. Na publicação: Leonardo L P Macedo; Maria C M Silva; Maria F Grossi-de-Sa.,| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia; Embrapa Semiárido. |
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| Registros recuperados : 136 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Recursos Genéticos e Biotecnologia; Embrapa Semiárido. |
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Data corrente: |
19/02/2021 |
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Data da última atualização: |
07/02/2022 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 2 |
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Autoria: |
ARRAES, F. B. M.; MARTINS-DE-SA, D; VASQUEZ, D. D. N.; MELO, B. P.; FAHEEM, M.; MACEDO, L. L. P. de; MORGANTE, C. V.; BARBOSA, J. A. R. G.; TOGAWA, R. C.; MOREIRA, V. J. V.; DANCHIN, E. G. J.; SA, M. F. G. de. |
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Afiliação: |
FABRICIO BARBOSA MONTEIRO ARRAES; DIOGO MARTINS-DE-SA; DANIEL D. NORIEGA VASQUEZ; BRUNO PAES MELO; MUHAMMAD FAHEEM; LEONARDO LIMA PEPINO DE MACEDO; CAROLINA VIANNA MORGANTE, CPATSA; JOÃO ALEXANDRE R. G. BARBOSA; ROBERTO COITI TOGAWA; VALDEIR JUNIO VAZ MOREIRA; ETIENNE G. J. DANCHIN; MARIA FATIMA GROSSI DE SA. |
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Título: |
Dissecting protein domain variability in the core rna interference machinery of five insect orders. |
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Ano de publicação: |
2021 |
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Fonte/Imprenta: |
RNA Biology, v. 18, n. 11, p. 1653-1681, 2021. |
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DOI: |
https://doi.org/10.1080/15476286.2020.1861816 |
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Idioma: |
Inglês |
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Conteúdo: |
RNA interference (RNAi)-mediated gene silencing can be used to control specific insect pest populations. Unfortunately, the variable efficiency in the knockdown levels of target genes has narrowed the applicability of this technology to a few species. Here, we examine the current state of knowledge regarding the miRNA (micro RNA) and siRNA (small interfering RNA) pathways in insects and investigate the structural variability at key protein domains of the RNAi machinery. Our goal was to correlate domain variability with mechanisms affecting the gene silencing efficiency. To this end, the protein domains of 168 insect species, encompassing the orders Coleoptera, Diptera, Hemiptera, Hymenoptera, and Lepidoptera, were analysed using our pipeline, which takes advantage of meticulous structure-based sequence alignments. We used phylogenetic inference and the evolutionary rate coefficient (K) to outline the variability across domain regions and surfaces. Our results show that four domains, namely dsrm, Helicase, PAZ and Ribonuclease III, are the main contributors of protein variability in the RNAi machinery across different insect orders. We discuss the potential roles of these domains in regulating RNAi-mediated gene silencing and the role of loop regions in fine-tuning RNAi efficiency. Additionally, we identified several order-specific singularities which indicate that lepidopterans have evolved differently from other insect orders, possibly due to constant coevolution with plants and viruses. In conclusion, our results highlight several variability hotspots that deserve further investigation in order to improve the application of RNAi technology in the control of insect pests. MenosRNA interference (RNAi)-mediated gene silencing can be used to control specific insect pest populations. Unfortunately, the variable efficiency in the knockdown levels of target genes has narrowed the applicability of this technology to a few species. Here, we examine the current state of knowledge regarding the miRNA (micro RNA) and siRNA (small interfering RNA) pathways in insects and investigate the structural variability at key protein domains of the RNAi machinery. Our goal was to correlate domain variability with mechanisms affecting the gene silencing efficiency. To this end, the protein domains of 168 insect species, encompassing the orders Coleoptera, Diptera, Hemiptera, Hymenoptera, and Lepidoptera, were analysed using our pipeline, which takes advantage of meticulous structure-based sequence alignments. We used phylogenetic inference and the evolutionary rate coefficient (K) to outline the variability across domain regions and surfaces. Our results show that four domains, namely dsrm, Helicase, PAZ and Ribonuclease III, are the main contributors of protein variability in the RNAi machinery across different insect orders. We discuss the potential roles of these domains in regulating RNAi-mediated gene silencing and the role of loop regions in fine-tuning RNAi efficiency. Additionally, we identified several order-specific singularities which indicate that lepidopterans have evolved differently from other insect orders, possibly due to constant coevolution with plant... Mostrar Tudo |
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Palavras-Chave: |
Argonaute; DCR1; Dicer; Drosha; DsRBDs; Evolução da proteína; In silico analysis; Loquacious; Pasha; Protein evolution; R2D2; RIIID II; Sequência de proteínas inteira; Structure-function relationship. |
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Thesagro: |
Controle Genético; Genoma; Inseto; Praga; Proteína. |
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Thesaurus NAL: |
Insect control; Pest control; Protein structure; Proteins. |
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Categoria do assunto: |
--
G Melhoramento Genético |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/230917/1/Dissecting-protein-domain-variability-2021.pdf
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Marc: |
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245 $aDissecting protein domain variability in the core rna interference machinery of five insect orders.$h[electronic resource]
260 $c2021
520 $aRNA interference (RNAi)-mediated gene silencing can be used to control specific insect pest populations. Unfortunately, the variable efficiency in the knockdown levels of target genes has narrowed the applicability of this technology to a few species. Here, we examine the current state of knowledge regarding the miRNA (micro RNA) and siRNA (small interfering RNA) pathways in insects and investigate the structural variability at key protein domains of the RNAi machinery. Our goal was to correlate domain variability with mechanisms affecting the gene silencing efficiency. To this end, the protein domains of 168 insect species, encompassing the orders Coleoptera, Diptera, Hemiptera, Hymenoptera, and Lepidoptera, were analysed using our pipeline, which takes advantage of meticulous structure-based sequence alignments. We used phylogenetic inference and the evolutionary rate coefficient (K) to outline the variability across domain regions and surfaces. Our results show that four domains, namely dsrm, Helicase, PAZ and Ribonuclease III, are the main contributors of protein variability in the RNAi machinery across different insect orders. We discuss the potential roles of these domains in regulating RNAi-mediated gene silencing and the role of loop regions in fine-tuning RNAi efficiency. Additionally, we identified several order-specific singularities which indicate that lepidopterans have evolved differently from other insect orders, possibly due to constant coevolution with plants and viruses. In conclusion, our results highlight several variability hotspots that deserve further investigation in order to improve the application of RNAi technology in the control of insect pests.
650 $aInsect control
650 $aPest control
650 $aProtein structure
650 $aProteins
650 $aControle Genético
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650 $aProteína
653 $aArgonaute
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653 $aIn silico analysis
653 $aLoquacious
653 $aPasha
653 $aProtein evolution
653 $aR2D2
653 $aRIIID II
653 $aSequência de proteínas inteira
653 $aStructure-function relationship
700 1 $aMARTINS-DE-SA, D
700 1 $aVASQUEZ, D. D. N.
700 1 $aMELO, B. P.
700 1 $aFAHEEM, M.
700 1 $aMACEDO, L. L. P. de
700 1 $aMORGANTE, C. V.
700 1 $aBARBOSA, J. A. R. G.
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700 1 $aDANCHIN, E. G. J.
700 1 $aSA, M. F. G. de
773 $tRNA Biology$gv. 18, n. 11, p. 1653-1681, 2021.
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Embrapa Semiárido (CPATSA) |
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