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| Registros recuperados : 729 | |
| 541. |  | PANETTO, J. C. do C.; SILVA, M. V. G. B.; LEITE, R. M. H.; MACHADO, M. A.; BRUNELI, F. A. T.; REIS, D. R. de L.; PEIXOTO, M. G. C. D.; VERNEQUE, R. da S. Red Sindhi cattle in Brazil: population structure and distribution. Genetics and Molecular Research, v. 16, n. 1, 2017. 9 p.| Biblioteca(s): Embrapa Gado de Leite. |
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| 542. | | FERNANDES, E. N.; MARTINS, C. E.; NOBRE, M. M.; NOVAES, E.; LOPES, F. C. F.; MENDONCA, L. C.; PEREIRA, L. G. R.; MACHADO, M. A.; TEIXEIRA, S. R.; TALONE, A.; SILVA, F. H.; FIORINI, J. P.; MARTINS, M. C. (ed.). Desafios para a sustentabilidade ambiental, social e econômica da cadeia produtiva do leite. Juiz de Fora: Embrapa Gado de Leite, 2012. 189 p.| Biblioteca(s): Embrapa Gado de Leite. |
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| 543. | | COLETA FILHO, H. D.; TARGON, M. L. P. N.; TAKITA, M. A.; NEGRI, J. D. de; AMARAL, A. M. do; MÜLLER, G. W.; POMPEU JÚNIOR, J.; CARVALHO, S. A. de; MACHADO, M. A. Detecção do agente causal do greening do citros (Candidatus Liberibacter asiaticus) no estado de São Paulo. Summa Phytopathologica, Botucatu, v. 30, n. 4, p. 510-511, Oct./Dec. 2004 Comunicação.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 544. | | NASCIMENTO, C. S. do; MACHADO, M. A.; GUIMARÃES, S. E. F.; GUIMARAES, M. F. M.; PEIXOTO, J. O.; FURLONG, J.; PRATA, M. C. de A.; VERNEQUE, R. da S.; TEODORO, R. L.; LOPES, P. S. Differential expression of genes in resistant versus susceptible Gyr x Holstein cattle challenged with the tick Rhipicephalus (Boophilus) microplus. Genetics and Molecular Research, v. 9, n. 4, p. 1974-1979, 2010.| Biblioteca(s): Embrapa Gado de Leite. |
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| 545. | | WOHLRES-VIANA, S.; ARASHIRO, E. K. N.; MINARE, T. P.; FERNANDES, C. A. C.; GRAZIA, J. G. V.; SIQUEIRA, L. G. B.; MACHADO, M. A.; VIANA, J. H. M. Differential expression of LHCGR and its isoforms is associated to the variability in superovulation responses of Gir cattle. Theriogenology, v. 126, p. 68-74, 2019.| Biblioteca(s): Embrapa Gado de Leite; Embrapa Recursos Genéticos e Biotecnologia. |
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| 546. | | ZERLOTINI NETO, A.; STAFUZZA, N. B.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; SILVA, M. V. G. B. Detection of potential genetic variants affecting gene function in Guzerat cattle. In: INTERNATIONAL CONFERENCE OF THE AB3C, 12., 2016, Belo Horizonte. Proceedings... [S.l.]: AB3C, 2016. p. 47. X-meeting 2016.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 547. | | ZERLOTINI NETO, A.; STAFUZZA, N. B.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; SILVA, M. V. G. B. Detection of potential genetic variants affecting gene function in Guzerat cattle. In: INTERNATIONAL CONFERENCE OF THE AB3C, 12., 2016, Belo Horizonte. Proceedings... [S.l.]: AB3C, 2016. p. 47. X-meeting 2016.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 548. | | GASPARIN, G.; MIYATA, M.; COUTINNHO, M.; MARTINEZ, M. L.; MACHADO, M. A.; SILVA, M. V. G. B.; SILVA, A. L.; CAMPOS, T. S.; SONSEGARD, T. S.; REGITANO, L. C. de A. Detection of a QTL associated with tick resistance on bovine chromossome 7 (BTA7) using A F2 experimental population. In: WORLD CONGRESS ON GENETICS APPLIED TO LIVESTOCK PRODUCTION, 8., 2006, Belo Horizonte. Proceedings... Belo Horizonte: Instituto Prociência, 2006. 2 f. 1 CD-ROM| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 549. | | MOURÃO, G. B.; SALEM, M. M. I; PACKER, U. I.; PINTO, L. F. B.; MACHADO, M. A.; GASPARIN, G.; AZEVEDO, A. L. S.; VERNEQUE, R. da S.; REGITANO, L. C. de A. Detection of quantitative trait loci for growth traits on bovine chromosome 2. In: WORLD CONGRESS ON GENETICS APPLIED TO LIVESTOCK PRODUCTION, 9., 2010, Leipzig. Proceedings... Leipzig: German Society fo Animal Science, 2010. 1 CD-ROM.| Biblioteca(s): Embrapa Gado de Leite. |
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| 550. | | MOURÃO, G. B.; SALEM, M. M. I.; PACKER, U. I.; PINTO, L. F. B.; MACHADO, M. A.; GASPARIN, G.; AZEVEDO, A. L. S.; VERNEQUE, R. da S.; REGITANO, L. C. de A. Detection of quantitative trait loci for growth traits on bovine chromosome. In: WORLD CONGRESS ON GENETICS APPLIED TO LIVESTOCK PRODUCTION, 9., 2010, Leipzig. Proceedings... Leipzig: German Society fo Animal Science, 2010. 1 CD-ROM| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 551. | | REIS, D. R. de L.; PEREIRA, H. P.; EGITO, A. A. do; TORRES JUNIOR, R. A. de A.; KIM, E. S.; SONSTEGARD, T. S.; MARTINS, M. F.; PANETTO, J. C. do C.; SILVA, M. V. G. B.; MACHADO, M. A. Development of tetra-primer ARMS-PCR protocol to genotype the prolactin receptor SNP 39136666 and assessment of this SNP in Brazilian locally adapted cattle breeds. Arquivo Brasileiro e Medicina Veterinária e Zootecnia, v. 73, p. 534-538, 2021. Communication.| Biblioteca(s): Embrapa Gado de Leite. |
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| 552. | | AZEVEDO, A. L. S.; SOUZA, F. R. de; CAMPOS, R. A.; REIS, D. R. de L.; MACHADO, J. C.; MACHADO, M. A.; LEDO, F. J. da S.; RESENDE, M. Development of microsatellite panels for molecular fingerprinting of Napier grass (Cenchrus purpureus) cultivars. Crop Breeding and Applied Biotechnology, v. 22, n. 4, e42522244, 2022. Nota científica.| Biblioteca(s): Embrapa Gado de Leite. |
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| 553. | | PEREIRA, M. M.; COSTA, F. Q.; CAMPOS JR, P. H. A.; SERAPIÃO, R. V.; POLISSENI, J.; CARVALHO, B. C.; VIANA, J. H. M.; SA, W. F.; MACHADO, M. A.; CAMARGO, L. S. de A. Developmental competence of bovine oocytes matured in serum-free medium under low oxygen tension. In: ANNUAL CONFERENCE OF THE INTERNATIONAL EMBRYO TRANSFER SOCIETY - REPRODUCTION, FERTILITY AND DEVELOPMENT, 21., 2009, San Diego. Proceeding... San Diego: ISTE, 2009.| Biblioteca(s): Embrapa Gado de Leite. |
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| 554. | | ROSSE, I. da C.; STEINBERG, R. da S.; COIMBRA, R. S.; PEIXOTO, M. G. C. D.; VERNEQUE, R. da S.; MACHADO, M. A.; FONSECA, C. G.; CARVALHO, M. R. S. Novel SNPs and INDEL polymorphisms in the 30UTR of DGAT1 gene: in silico analyses and a possible association. Molecular Biological Reproduction, v. 41, n. 7, p. 4555-4563, 2014.| Biblioteca(s): Embrapa Gado de Leite. |
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| 555. | | PANETTO, J. C. do C.; MACHADO, M. A.; SILVA, M. V. G. B.; BARBOSA, R. S.; SANTOS, G. G. dos; LEITE, R. de M. H.; PEIXOTO, M. G. C. D. Parentage assignment using SNP markers, inbreeding and population size for the Brazilian Red Sindhi cattle. Livestock Science, v. 204, p. 33-38, 2017.| Biblioteca(s): Embrapa Gado de Leite; Embrapa Semiárido. |
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| 556. | | GUEDES, E.; AZEVEDO, A. L. S.; GASPARINI, C.; REIS, D. R. de L.; PRATA, M. C. de A.; FURLONG, J.; VERNEQUE, R. da S.; ANDRADE, L. G. DE; ARBEX, W. A.; SILVA, M. V. G. B.; MACHADO, M. A. A partial genome scan study to identify loci for tick resistance in cattle. Ticks and tick-borne pathogens International Conference, 2011, Zaragoza. Proceedings... p. 148| Biblioteca(s): Embrapa Gado de Leite. |
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| 557. | | SANTOS, F. F.; MENDONCA, L. C.; GUIMARAES, A. S.; RIBEIRO, J. B.; LANGE, C. C.; SILVA, M. A. S.; OLIVEIRA, B. L.; MENDONÇA, R. S. DE; MACHADO, M. A.; BRITO, M. A. V. P. e. Perfil de resistência a antimicrobianos de Staphylococcus spp. resistentes a oxacilina isolados de leite bovino. In: CONGRESSO BRASILEIRO DE QUALIDADE DO LEITE, 5., 2013, Botucatu. Anais. Curitiba: Conselho Brasileiro de Qualidade do Leite, 2013. p. 98-99.| Biblioteca(s): Embrapa Gado de Leite. |
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| 558. | | RAMOS-GONZÁLEZ, P. L.; CHABI-JESUS, C.; GUERRA-PERAZA, O.; BRETON, M. C.; ARENA, G. D.; NUNES, M. A.; KITAJIMA, E. W.; MACHADO, M. A.; ASTUA, J. de F. Phylogenetic and Molecular Variability Studies Reveal a New Genetic Clade of Citrus leprosis virus C. Viruses, v.8, n.153, 2016.| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 559. | | GOMES, S. S. L.; LOPES, J. M. L.; MATOS, E. M. de; CABRAL, E. G.; AZEVEDO, A. L. S.; MACHADO, M. A.; CAMPOS, J. M. S. de; MENINI NETO, L.; VICCINI, L. F. Phenotypic variation seems not to be associated with the genetic profle in Zygopetalum (Orchidaceae): a case study of a high‑elevation rocky complex. Molecular Biology Reports, v. 51, article 582, 2024.| Biblioteca(s): Embrapa Gado de Leite. |
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| 560. | | AZEVEDO, A. L. S.; GASPARINI, K.; BERNARDO, K. B.; PEIXOTO, M. G. C. D.; PIRES, M. de F. A.; REGITANO, L. C. de A.; SILVA, M. V. G. B.; VERNEQUE, R. da S.; MACHADO, M. A. Fine mapping of quantitative trait loci for tick resistance on BTA5. In: INTERNATIONAL CONFERENCE ON ANIMAL GENETICS, 32., 2010, Edinburgh. Proceedings... Edinburgh: International Society for Animal Genetics, 2010.| Biblioteca(s): Embrapa Gado de Leite. |
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| Registros recuperados : 729 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Gado de Corte; Embrapa Gado de Leite; Embrapa Pecuária Sudeste. |
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Data corrente: |
19/08/2021 |
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Data da última atualização: |
29/12/2021 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
VERARDO, L. L.; SILVA, F. F. e; MACHADO, M. A.; PANETTO, J. C. do C.; REIS, D. R. de L.; OTTO, P. I.; REGITANO, L. C. de A.; SILVA, L. O. C. da; EGITO, A. A. do; ALBUQUERQUE, M. do S. M.; ZANELLA, R.; SILVA, M. V. G. B. |
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Afiliação: |
LUCAS LIMA VERARDO, Universidade Federal dos Vales do Jequitinhonha e Mucuri; FABYANO FONSECA E SILVA, Universidade Federal de Viçosa; MARCO ANTONIO MACHADO, CNPGL; JOAO CLAUDIO DO CARMO PANETTO, CNPGL; DANIELE RIBEIRO DE LIMA REIS FAZA, CNPGL; PAMELA ITAJARA OTTO, Universidade Federal de Santa Maria; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE; LUIZ OTAVIO CAMPOS DA SILVA, CNPGC; ANDREA ALVES DO EGITO, CNPGC; MARIA DO SOCORRO MAUÉS ALBUQUERQUE; RICARDO ZANELLA, Universidade de Passo Fundo; MARCOS VINICIUS GUALBERTO B SILVA, CNPGL. |
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Título: |
Genome-wide analyses reveal the genetic architecture and candidate genes of indicine, taurine, synthetic crossbreds, and locally adapted cattle in Brazil. |
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Ano de publicação: |
2021 |
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Fonte/Imprenta: |
Frontiers in Genetics, v. 12, article 702822, 2021. |
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DOI: |
https://doi.org/10.3389/fgene.2021.702822 |
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Idioma: |
Inglês |
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Conteúdo: |
Cattle population history, breeding systems, and geographic subdivision may be reflected in runs of homozygosity (ROH), effective population size (Ne), and linkage disequilibrium (LD) patterns. Thus, the assessment of this information has become essential to the implementation of genomic selection on purebred and crossbred cattle breeding programs. In this way, we assessed the genotype of 19 cattle breeds raised in Brazil belonging to taurine, indicine, synthetic crossbreds, and Iberian-derived locally adapted ancestries to evaluate the overall LD decay patterns, Ne, ROH, and breed composition. We were able to obtain a general overview of the genomic architecture of cattle breeds currently raised in Brazil and other tropical countries. We found that, among the evaluated breeds, different marker densities should be used to improve the genomic prediction accuracy and power of genome-wide association studies. Breeds showing low Ne values indicate a recent inbreeding, also reflected by the occurrence of longer ROH, which demand special attention in the matting schemes to avoid extensive inbreeding. Candidate genes (e.g., ABCA7, PENK, SPP1, IFNAR1, IFNAR2, SPEF2, PRLR, LRRTM1, and LRRTM4) located in the identified ROH islands were evaluated, highlighting biological processes involved with milk production, behavior, rusticity, and fertility. Furthermore, we were successful in obtaining the breed composition regarding the taurine and indicine composition using single-nucleotide polymorphism (SNP) data. MenosCattle population history, breeding systems, and geographic subdivision may be reflected in runs of homozygosity (ROH), effective population size (Ne), and linkage disequilibrium (LD) patterns. Thus, the assessment of this information has become essential to the implementation of genomic selection on purebred and crossbred cattle breeding programs. In this way, we assessed the genotype of 19 cattle breeds raised in Brazil belonging to taurine, indicine, synthetic crossbreds, and Iberian-derived locally adapted ancestries to evaluate the overall LD decay patterns, Ne, ROH, and breed composition. We were able to obtain a general overview of the genomic architecture of cattle breeds currently raised in Brazil and other tropical countries. We found that, among the evaluated breeds, different marker densities should be used to improve the genomic prediction accuracy and power of genome-wide association studies. Breeds showing low Ne values indicate a recent inbreeding, also reflected by the occurrence of longer ROH, which demand special attention in the matting schemes to avoid extensive inbreeding. Candidate genes (e.g., ABCA7, PENK, SPP1, IFNAR1, IFNAR2, SPEF2, PRLR, LRRTM1, and LRRTM4) located in the identified ROH islands were evaluated, highlighting biological processes involved with milk production, behavior, rusticity, and fertility. Furthermore, we were successful in obtaining the breed composition regarding the taurine and indicine composition using single-nucleotide pol... Mostrar Tudo |
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Palavras-Chave: |
Rusticidade; Rusticity. |
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Thesagro: |
Bovino; Comportamento Animal; Fertilidade Animal; Gado; Genética Animal; Genoma; Produção Leiteira. |
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Thesaurus NAL: |
Animal behavior; Animal fertility; Homozygosity; Linkage disequilibrium; Milk production; Population size. |
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Categoria do assunto: |
K Ciência Florestal e Produtos de Origem Vegetal |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/225349/1/Genome-wide.pdf
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Marc: |
LEADER 02865naa a2200445 a 4500
001 2133730
005 2021-12-29
008 2021 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.3389/fgene.2021.702822$2DOI
100 1 $aVERARDO, L. L.
245 $aGenome-wide analyses reveal the genetic architecture and candidate genes of indicine, taurine, synthetic crossbreds, and locally adapted cattle in Brazil.$h[electronic resource]
260 $c2021
520 $aCattle population history, breeding systems, and geographic subdivision may be reflected in runs of homozygosity (ROH), effective population size (Ne), and linkage disequilibrium (LD) patterns. Thus, the assessment of this information has become essential to the implementation of genomic selection on purebred and crossbred cattle breeding programs. In this way, we assessed the genotype of 19 cattle breeds raised in Brazil belonging to taurine, indicine, synthetic crossbreds, and Iberian-derived locally adapted ancestries to evaluate the overall LD decay patterns, Ne, ROH, and breed composition. We were able to obtain a general overview of the genomic architecture of cattle breeds currently raised in Brazil and other tropical countries. We found that, among the evaluated breeds, different marker densities should be used to improve the genomic prediction accuracy and power of genome-wide association studies. Breeds showing low Ne values indicate a recent inbreeding, also reflected by the occurrence of longer ROH, which demand special attention in the matting schemes to avoid extensive inbreeding. Candidate genes (e.g., ABCA7, PENK, SPP1, IFNAR1, IFNAR2, SPEF2, PRLR, LRRTM1, and LRRTM4) located in the identified ROH islands were evaluated, highlighting biological processes involved with milk production, behavior, rusticity, and fertility. Furthermore, we were successful in obtaining the breed composition regarding the taurine and indicine composition using single-nucleotide polymorphism (SNP) data.
650 $aAnimal behavior
650 $aAnimal fertility
650 $aHomozygosity
650 $aLinkage disequilibrium
650 $aMilk production
650 $aPopulation size
650 $aBovino
650 $aComportamento Animal
650 $aFertilidade Animal
650 $aGado
650 $aGenética Animal
650 $aGenoma
650 $aProdução Leiteira
653 $aRusticidade
653 $aRusticity
700 1 $aSILVA, F. F. e
700 1 $aMACHADO, M. A.
700 1 $aPANETTO, J. C. do C.
700 1 $aREIS, D. R. de L.
700 1 $aOTTO, P. I.
700 1 $aREGITANO, L. C. de A.
700 1 $aSILVA, L. O. C. da
700 1 $aEGITO, A. A. do
700 1 $aALBUQUERQUE, M. do S. M.
700 1 $aZANELLA, R.
700 1 $aSILVA, M. V. G. B.
773 $tFrontiers in Genetics$gv. 12, article 702822, 2021.
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Embrapa Gado de Leite (CNPGL) |
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