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Registros recuperados : 5 | |
1. | | LIU, G. E.; LI, R. W.; SONSTEGARD, T. S.; MATUKUMALLI, L. K.; SILVA, M. V. G. B.; VAN TASSELL, C. P. Characterization of a novel microdeletion polymorphism on BTA5 in cattle. Animal Genetics, v. 39, n. 6, p. 655-658, 2008. Biblioteca(s): Embrapa Gado de Leite. |
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2. | | PORTO-NETO, L. R.; SONSTEGARD, T. S.; LIU, G. E.; BICKHART, D. M.; SILVA, M. V. G. B.; MACHADO, M. A.; UTSUNOMIYA, Y. T.; GARCIA, J. F.; GONDRO, C.; VAN TASSELL, C. P. Genomic divergence of zebu and taurine cattle identified through high-density SNP genotyping. BMC Genomics, v. 14, article 876, 2013. Disponível em: http://www.biomedcentral.com/1471-2164/14/876 Biblioteca(s): Embrapa Gado de Leite. |
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3. | | O'BRIEN, A. M. P.; UTSUNOMIYA, Y. T.; MÉSZÁROS, G.; BICKHART, D. M.; LIU, G. E.; TASSEL, C. P. V.; SONSTEGARD, T. S.; SILVA, M. V. G. B.; GARCIA, J. F.; SÖLKNER, J. Assessing signatures of selection through variation in linkage disequilibrium between taurine and indicine cattle. Genetics Selection Evolution, v. 46, n. 19, 2014. 14 p. Biblioteca(s): Embrapa Gado de Leite. |
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4. | | LIU G. E.; HOU, Y. L.; ZHU, B.; CARDONE, M. F.; JIANG, L.; CELLAMARE, A.; MITRA, A.; ALEXANDER, L. J.; COUTINHO. L. L.; DELL'AQUILA, M. E.; GASBARRE, L. C.; LACALANDRA, G.; LI, R. W.; MATUKUMALLI, L. K.; NONNEMAN, D.; REGITANO, L. C. de A.; SMITH, T. P; SONG, J. Z.; SONSTEGARD, T. S.; Van TASSELL, C. P.; VENTURA, M.; EICHLER, E. E.; McDANELD, T. G.; KEELE, J. W. Analysis of copy number variations among diverse cattle breeds. Genome Research, v. 20, n. 5, p. 693-703, 2010 Biblioteca(s): Embrapa Pecuária Sudeste. |
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5. | | GIBBS, R. A.; TAYLOR, J. F.; VAN TASSELL, C. P.; BARENDSE, W.; EVERSOLE, K. A.; GILL, C. A.; GREEN, R. D.; HAMERNIK, D. L.; KAPPES, S. M.; LIEN, S.; MATUKUMALLI, L. K.; MCEWAN, J. C.; NAZARETH, L. V.; SCHNABEL, R. D.; WEINSTOCK, G. M.; WHEELER, D. A.; AJMONE-MARSAN, P.; BOETTCHER, P. J.; CAETANO, A. R.; GARCIA, J. F.; HANOTTE, O.; MARIANI, P.; SKOW, L. C.; SONSTEGARD, T. S.; WILLIAMS, J. L.; DIALLO, B.; HAILEMARIAM, L.; MARTINEZ, M. L.; MORRIS, C. A.; SILVA, L. O. C. da; SPELMAN, R. J.; MULATU, W.; ZHAO, K.; ABBEY, C. A.; AGABA, M.; ARAUJO, F. R.; BUNCH, R. J.; BURTON, J.; GORNI, C.; OLIVIER, H.; HARRISON, B. E.; LUFF, B.; MACHADO, M. A.; MWAKAYA, J.; PLASTOW, G.; SIM, W.; SMITH, T.; THOMAZ, M. B.; VALENTINI, A.; WILLIAMS, P.; WOMACK, J.; WOOLLIAMS, J. A.; LIU, Y.; QIN, X.; WORLEY, K. C.; GAO, C.; JIANG, H.; MOORE, S. S.; REN, Y.; SONG, X.-Z.; BUSTAMANTE, C. D.; HERNANDEZ, R. D.; MUZNY, D. M.; PATIL, S.; SAN LUCAS, A.; FU, Q.; KENT, M. P.; VEGA, R.; MATUKUMALLI, A.; MCWILLIAM, S.; SCLEP, G.; BRYC, K.; CHOI, J.; GAO, H.; GREFENSTETTE, J. J.; MURDOCH, B.; STELLA, A.; VILLA-ANGULO, R.; WRIGHT, M.; AERTS, J.; JANN, O.; NEGRINI, R.; GODDARD, M. E.; HAYES, B. J.; BRADLEY, D. G.; SILVA, M. V. G. B.; LAU, L. P. L.; LIU, G. E.; LYNN, D. J.; PANZITTA, F.; DODDS, K. G. Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds. Science, v. 324, n. 5926, p. 528-532, 2009. Biblioteca(s): Embrapa Gado de Leite. |
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Registros recuperados : 5 | |
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Registro Completo
Biblioteca(s): |
Embrapa Gado de Leite. |
Data corrente: |
06/03/2009 |
Data da última atualização: |
14/05/2024 |
Tipo da produção científica: |
Artigo em Anais de Congresso / Nota Técnica |
Autoria: |
LIU, G. E.; LI, R. W.; SONSTEGARD, T. S.; MATUKUMALLI, L. K.; SILVA, M. V. G. B.; VAN TASSELL, C. P. |
Afiliação: |
G. E. Liu, USDA-ARS; R.W. LI, USDA-ARS; Tad S. Sonstegard USDA USA; Lakshmi Matukumalli George Mason University USA; Marcos Vinicius Gualberto Barbosa da Silva Embrapa Gado de Leite / USDA USA; Curtis Van Tassell USDA USA. |
Título: |
Characterization of a novel microdeletion polymorphism on BTA5 in cattle. |
Ano de publicação: |
2008 |
Fonte/Imprenta: |
Animal Genetics, v. 39, n. 6, p. 655-658, 2008. |
DOI: |
https://doi.org/10.1111/j.1365-2052.2008.01769.x |
Idioma: |
Inglês |
Conteúdo: |
We present a detailed breakpoint mapping and population frequency analysis of a 214-kb microdeletion that removes multiple olfactory receptor genes. Using progressive rounds of PCR assays, we mapped the upstream and downstream breakpoints of this microdeletion event to 1 and 12 kb genomic regions, respectively. We developed PCR-based genotyping assays, characterized a dairy cattle panel of 96 samples and found that the frequency of the deletion allele was over 51%. Our results indicated that this microdeletion is an ancient event occurring in one of the earlier founders, and that it has been stably inherited across generations in the North American dairy cattle population. |
Palavras-Chave: |
Breakpoint; Cattle genome; Deletion; Population frequency; Structural variants. |
Categoria do assunto: |
-- |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/596819/1/Characterization-of-a-novel-microdeletion-polymorphism-on-BTA5-in-cattle.pdf
|
Marc: |
LEADER 01435naa a2200253 a 4500 001 1596819 005 2024-05-14 008 2008 bl uuuu u00u1 u #d 024 7 $ahttps://doi.org/10.1111/j.1365-2052.2008.01769.x$2DOI 100 1 $aLIU, G. E. 245 $aCharacterization of a novel microdeletion polymorphism on BTA5 in cattle.$h[electronic resource] 260 $c2008 520 $aWe present a detailed breakpoint mapping and population frequency analysis of a 214-kb microdeletion that removes multiple olfactory receptor genes. Using progressive rounds of PCR assays, we mapped the upstream and downstream breakpoints of this microdeletion event to 1 and 12 kb genomic regions, respectively. We developed PCR-based genotyping assays, characterized a dairy cattle panel of 96 samples and found that the frequency of the deletion allele was over 51%. Our results indicated that this microdeletion is an ancient event occurring in one of the earlier founders, and that it has been stably inherited across generations in the North American dairy cattle population. 653 $aBreakpoint 653 $aCattle genome 653 $aDeletion 653 $aPopulation frequency 653 $aStructural variants 700 1 $aLI, R. W. 700 1 $aSONSTEGARD, T. S. 700 1 $aMATUKUMALLI, L. K. 700 1 $aSILVA, M. V. G. B. 700 1 $aVAN TASSELL, C. P. 773 $tAnimal Genetics$gv. 39, n. 6, p. 655-658, 2008.
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Embrapa Gado de Leite (CNPGL) |
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