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| Registros recuperados : 12 | |
| 2. |  | SILVA, V. R. da; ORTIGARA, C.; DEBIASI, H.; MORAES, M. T. de; LUZ, F. B.; FRANCHINI, J. C. Retenção e perda de água por evaporação de um Latossolo Vermelho sob diferentes níveis de compactação. In: REUNIÃO SUL-BRASILEIRA DE CIÊNCIA DO SOLO, 10., 2014, Pelotas. Fatos e mitos em ciência do solo. Pelotas: Sociedade Brasileira de Ciência do Solo; UFPEL, 2014. 1 pen drive.| Biblioteca(s): Embrapa Soja. |
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| 5. | | MORAES, M. T. de; DEBIASI, H.; FRANCHINI, J. C.; SILVA, V. R. da; CARLESSO, R.; LUZ, F. B. da. Curva de retenção de água de um latossolo sob estados de compactação. In: REUNIÃO BRASILEIRA DE MANEJO E CONSERVAÇÃO DO SOLO E DA ÁGUA, 19., 2012, Lages. Conservação do solo e da água no Brasil: preceitos e ações no ensino, na pesquisa e na extensão. Lages: SBCS: UDESC: IF: EPAGRI, 2012.| Biblioteca(s): Embrapa Soja. |
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| 6. | | MORAES, M. T. de; DEBIASI, H.; FRANCHINI, J. C.; SILVA, V. R. da; CARLESSO, R.; LUZ, F. B. da. Curva de retenção de água de um Latossolo sob estados de compactação. In: REUNIÃO BRASILEIRA DE MANEJO E CONSERVAÇÃO DO SOLO E DA ÁGUA, 19., 2012, Lages. Conservação do solo e da água no Brasil: preceitos e ações no ensino, na pesquisa e na extensão: [anais]. [S.l.]: SBCS, 2012. 1 CD-ROM.| Biblioteca(s): Embrapa Soja. |
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| 7. | | MORAES, M. T. de; SILVA, V. R. da; DEBIASI, H.; FRANCHINI, J. C.; ORTIGARA, C.; LUZ, F. B. da. Compressibilidade de um latossolo vermelho sob diferentes estados de compactação. In: JORNADA ACADÊMICA INTEGRADA, 26., 2011, Santa Maria. Anais... Santa Maria: UFSM, 2011. 4 p.| Biblioteca(s): Embrapa Soja. |
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| 8. | | ZULPO, L.; MORAES, M. T. de; DEBIASI, H.; FRANCHINI, J. C.; LUZ, F. B. da; LEVIEN, R. Sistemas de manejo do solo e de culturas em latossolo vermelho e sua relação com a produtividade de soja. In: REUNIÃO SUL-BRASILEIRA DE CIÊNCIA DO SOLO, 10., 2014, Pelotas. Fatos e mitos em ciência do solo. Pelotas: Sociedade Brasileira de Ciência do Solo; UFPEL, 2014. 1 pen drive.| Biblioteca(s): Embrapa Soja. |
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| 9. | | LUZ, F. B. da; MORAES, M. T. de; SILVA, V. R. da; DEBIASI, H.; FRANCHINI, J. C.; ORTIGARA, C. Tempo de escarificação e adoção do sistema plantio direto e a relação com a densidade do solo máxima. In: CONGRESSO BRASILEIRO DE CIÊNCIA DO SOLO, 34., 2013, Florianópolis. Ciência do solo: para quê e para quem? Anais... Florianópolis: SBCS, 2013. 4 p.| Biblioteca(s): Embrapa Soja. |
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| 10. | | LUZ, F. B. da; SILVA, V. R. da; MALLMANN, F. J. K.; PIRES, C. A. B.; DEBIASI, H.; FRANCHINI, J. C.; CHERUBIN, M. R. Monitoring soil quality changes in diversified agricultural cropping systems by the Soil Management Assessment Framework (SMAF) in southern Brazil Agriculture, Ecosystems and Environment, n. 281, p. 100-110, 2019.| Biblioteca(s): Embrapa Soja. |
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| 11. | | LUZ, F. B. da; ALVES, L. A.; ORTIGARA, C.; PIRES, C. A. B.; FRANCHINI, J. C.; DEBIASI, H.; SILVA, V. R. da. Soil Carbon and Nitrogen content in areas of agricultural expansion in southern Brazil. In: WORLD CONGRESS OF SOIL SCIENCE, 21., 2018, Rio de Janeiro. Soil science: beyond food and fuel: abstracts. Viçosa, MG: SBCS, 2018. não paginado. WCSS 2018.| Biblioteca(s): Embrapa Soja. |
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| 12. | | LUZ, F. B. da; MORAES, M. T. de; BORBA, D. A. de; ORTIGARA, C.; PIRES, C. A. B.; ALVES, L. A.; FREITAS, J. A. S. de; SILVA, V. R. da; DEBIASI, H.; FRANCHINI, J. C. Capacidade de suporte de carga de um Latossolo Vermelho com diferentes sistemas de manejo. In: REUNIÃO SUL-BRASILEIRA DE CIÊNCIA DO SOLO, 11., 2016, Frederico Westphalen. Qualidade do solo & ambiente de produção: anais. Pelotas: SBCS, 2016. 3 p.| Biblioteca(s): Embrapa Soja. |
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| Registros recuperados : 12 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Pecuária Sudeste. |
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Data corrente: |
15/03/2019 |
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Data da última atualização: |
02/12/2019 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
DINIZ, W. J. S.; MAZZONI, G.; COUTINHO; BANERJEE, P.; GEISTLINGER, L.; CESAR, A. S. M.; BERTOLINI. F.; AFONSO, J.; OLIVEIRA, P. S. N.; TIZIOTO, P. C.; KADARMIDEEN, H. N.; REGITANO, L. C. de A. |
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Afiliação: |
Wellison J. S. Diniz, UFSCAR; Gianluca Mazzoni, Technical University of Denmark; Luiz L. Coutinho, USP; Priyanka Banerjee, Technical University of Denmark; Ludwig Geistlinger, Graduate School of Public Health and Health Policy; Aline S. M. Cesar, USP; Francesca Bertolini, Technical University of DenmarK; Juliana Afonso, UFSCAR; Priscila S. N. de Oliveira, Bolsista/Embrapa Pecuária Sudeste; Polyana C. Tizioto, USP; Haja N. Kadarmideen, Technical University of Denmark; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE. |
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Título: |
Detection of Co-expressed pathway modules associated with mineral concentration and meat quality in nelore cattle. |
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Ano de publicação: |
2019 |
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Fonte/Imprenta: |
Frontiers in genetics, v. 10, n. 210, p. 1-12, 2019. |
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DOI: |
10.3389/fgene.2019.00210 |
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Idioma: |
Inglês |
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Conteúdo: |
Meat quality is a complex trait that is influenced by genetic and environmental factors, which includes mineral concentration. However, the association between mineral concentration and meat quality, and the specific molecular pathways underlying this association, are not well explored. We therefore analyzed gene expression as measured with RNA-seq in Longissimus thoracis muscle of 194 Nelore steers for association with three meat quality traits (intramuscular fat, meat pH, and tenderness) and the concentration of 13 minerals (Ca, Cr, Co, Cu, Fe, K, Mg, Mn, Na, P, S, Se, and Zn). We identified seven sets of co-expressed genes (modules) associated with at least two traits, which indicates that common pathways influence these traits. From pathway analysis of module hub genes, we further found an over-representation for energy and protein metabolism (AMPK and mTOR signaling pathways) in addition to muscle growth, and protein turnover pathways. Among the identified hub genes FASN, ELOV5, and PDE3B are involved with lipid metabolism and were affected by previously identified eQTLs associated to fat deposition. The reported hub genes and over-represented pathways provide evidence of interplay among gene expression, mineral concentration, and meat quality traits. Future studies investigating the effect of different levels of mineral supplementation in the gene expression and meat quality traits could help us to elucidate the regulatory mechanism by which the genes/pathways are affected. MenosMeat quality is a complex trait that is influenced by genetic and environmental factors, which includes mineral concentration. However, the association between mineral concentration and meat quality, and the specific molecular pathways underlying this association, are not well explored. We therefore analyzed gene expression as measured with RNA-seq in Longissimus thoracis muscle of 194 Nelore steers for association with three meat quality traits (intramuscular fat, meat pH, and tenderness) and the concentration of 13 minerals (Ca, Cr, Co, Cu, Fe, K, Mg, Mn, Na, P, S, Se, and Zn). We identified seven sets of co-expressed genes (modules) associated with at least two traits, which indicates that common pathways influence these traits. From pathway analysis of module hub genes, we further found an over-representation for energy and protein metabolism (AMPK and mTOR signaling pathways) in addition to muscle growth, and protein turnover pathways. Among the identified hub genes FASN, ELOV5, and PDE3B are involved with lipid metabolism and were affected by previously identified eQTLs associated to fat deposition. The reported hub genes and over-represented pathways provide evidence of interplay among gene expression, mineral concentration, and meat quality traits. Future studies investigating the effect of different levels of mineral supplementation in the gene expression and meat quality traits could help us to elucidate the regulatory mechanism by which the genes/pathways are affe... Mostrar Tudo |
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Palavras-Chave: |
AMPK pathway; Co-expression analysis; RNA sequencing; Tenderness. |
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Thesagro: |
Gado de Corte; Gordura Animal. |
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Thesaurus NAL: |
Beef cattle; Beef quality; Intramuscular fat. |
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Categoria do assunto: |
L Ciência Animal e Produtos de Origem Animal |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/194304/1/fgene-10-00210.pdf
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Marc: |
LEADER 02585naa a2200373 a 4500
001 2107117
005 2019-12-02
008 2019 bl uuuu u00u1 u #d
024 7 $a10.3389/fgene.2019.00210$2DOI
100 1 $aDINIZ, W. J. S.
245 $aDetection of Co-expressed pathway modules associated with mineral concentration and meat quality in nelore cattle.$h[electronic resource]
260 $c2019
520 $aMeat quality is a complex trait that is influenced by genetic and environmental factors, which includes mineral concentration. However, the association between mineral concentration and meat quality, and the specific molecular pathways underlying this association, are not well explored. We therefore analyzed gene expression as measured with RNA-seq in Longissimus thoracis muscle of 194 Nelore steers for association with three meat quality traits (intramuscular fat, meat pH, and tenderness) and the concentration of 13 minerals (Ca, Cr, Co, Cu, Fe, K, Mg, Mn, Na, P, S, Se, and Zn). We identified seven sets of co-expressed genes (modules) associated with at least two traits, which indicates that common pathways influence these traits. From pathway analysis of module hub genes, we further found an over-representation for energy and protein metabolism (AMPK and mTOR signaling pathways) in addition to muscle growth, and protein turnover pathways. Among the identified hub genes FASN, ELOV5, and PDE3B are involved with lipid metabolism and were affected by previously identified eQTLs associated to fat deposition. The reported hub genes and over-represented pathways provide evidence of interplay among gene expression, mineral concentration, and meat quality traits. Future studies investigating the effect of different levels of mineral supplementation in the gene expression and meat quality traits could help us to elucidate the regulatory mechanism by which the genes/pathways are affected.
650 $aBeef cattle
650 $aBeef quality
650 $aIntramuscular fat
650 $aGado de Corte
650 $aGordura Animal
653 $aAMPK pathway
653 $aCo-expression analysis
653 $aRNA sequencing
653 $aTenderness
700 1 $aMAZZONI, G.
700 1 $aCOUTINHO
700 1 $aBANERJEE, P.
700 1 $aGEISTLINGER, L.
700 1 $aCESAR, A. S. M.
700 1 $aBERTOLINI. F.
700 1 $aAFONSO, J.
700 1 $aOLIVEIRA, P. S. N.
700 1 $aTIZIOTO, P. C.
700 1 $aKADARMIDEEN, H. N.
700 1 $aREGITANO, L. C. de A.
773 $tFrontiers in genetics$gv. 10, n. 210, p. 1-12, 2019.
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Embrapa Pecuária Sudeste (CPPSE) |
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