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Registro Completo |
Biblioteca(s): |
Embrapa Gado de Corte; Embrapa Pecuária Sudeste. |
Data corrente: |
19/02/2018 |
Data da última atualização: |
18/07/2019 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
ROMEROA, A. R. da S.; SIQUEIRA, F.; SANTIAGO, G. G.; REGITANO, L. C. de A.; SOUZA JÚNIOR, M. D. de; TORRES JúNIOR, R. A. de A.; NASCIMENTO, A. V. do; GRISOLIA, A. B. |
Afiliação: |
Andrea Renata da Silva Romeroa, Federal University of Dourados - UFGD; FABIANE SIQUEIRA, CNPGC; Gustavo Garcia Santiago, Federal University of Mato Grosso do Sul - UFMS; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE; Maury Dorta de Souza Júnior, Brazilian Association of Canchim Cattle Breeders - ABCCAN; Roberto Augusto de Almeida Torres Júnior; André Vieira do Nascimento, São Paulo State University - UNESP; Alexeia Barufatti Grisolia, Federal University of Dourados - UFGD. |
Título: |
Prospecting genes associated with navel length, coat and scrotal circumference traits in Canchim cattle. |
Ano de publicação: |
2018 |
Fonte/Imprenta: |
Livestock Science, v. 210, p. 33-38, April 2018 |
Idioma: |
Inglês |
Conteúdo: |
The aim of this work was to identify genomic regions and genes in association with the navel length, coat and scrotal circumference traits of Canchim breed of cattle, using genome-wide association studies (GWAS). Imputed data from single nucleotide polymorphism type markers were used, with accuracy greater than 95%. The analyses of genome-wide association were conducted by the Bayes B method, implemented in the GenSel program. Non-overlapping windows that explained at least 0.19% of the additive genetic variance were considered as significant, this value corresponds five times the expected for 1 Mb size windows. GWAS indicated 31 regions in association with navel length, one coat region, and four SC-related regions. In these regions, 4 quantitative loci (QTLs) related to navel length and 5 with SC were identified, as for the coat, the QTLs detected did not present previously described relation with this trait. Among the candidate genes in the associated regions, 7 genes were cited in previous studies, with biological functions related to navel length, one for coat and three for SC. The candidate genes TMEM176A and TMEM176AB, which are orthologous in humans, are in association with navel's trait and compose the Androgen Induced 1 cluster. The identification of genes and QTLs, with a function related to the studied traits, previously described in the literature, reinforces the evidence that the found regions are associated with navel length, coat and SC. This information may contribute to the understanding of the genetic architecture involved with of these traits, to guiding genetic validation studies, gene introgression and contribute to include information concerning molecular markers in genetic evaluation of animal improvement programs. MenosThe aim of this work was to identify genomic regions and genes in association with the navel length, coat and scrotal circumference traits of Canchim breed of cattle, using genome-wide association studies (GWAS). Imputed data from single nucleotide polymorphism type markers were used, with accuracy greater than 95%. The analyses of genome-wide association were conducted by the Bayes B method, implemented in the GenSel program. Non-overlapping windows that explained at least 0.19% of the additive genetic variance were considered as significant, this value corresponds five times the expected for 1 Mb size windows. GWAS indicated 31 regions in association with navel length, one coat region, and four SC-related regions. In these regions, 4 quantitative loci (QTLs) related to navel length and 5 with SC were identified, as for the coat, the QTLs detected did not present previously described relation with this trait. Among the candidate genes in the associated regions, 7 genes were cited in previous studies, with biological functions related to navel length, one for coat and three for SC. The candidate genes TMEM176A and TMEM176AB, which are orthologous in humans, are in association with navel's trait and compose the Androgen Induced 1 cluster. The identification of genes and QTLs, with a function related to the studied traits, previously described in the literature, reinforces the evidence that the found regions are associated with navel length, coat and SC. This information may c... Mostrar Tudo |
Palavras-Chave: |
GWAS; Inference Bayesian; Polymorphisms. |
Thesaurus Nal: |
Single nucleotide polymorphism. |
Categoria do assunto: |
-- G Melhoramento Genético |
Marc: |
LEADER 02557naa a2200253 a 4500 001 2087833 005 2019-07-18 008 2018 bl uuuu u00u1 u #d 100 1 $aROMEROA, A. R. da S. 245 $aProspecting genes associated with navel length, coat and scrotal circumference traits in Canchim cattle.$h[electronic resource] 260 $c2018 520 $aThe aim of this work was to identify genomic regions and genes in association with the navel length, coat and scrotal circumference traits of Canchim breed of cattle, using genome-wide association studies (GWAS). Imputed data from single nucleotide polymorphism type markers were used, with accuracy greater than 95%. The analyses of genome-wide association were conducted by the Bayes B method, implemented in the GenSel program. Non-overlapping windows that explained at least 0.19% of the additive genetic variance were considered as significant, this value corresponds five times the expected for 1 Mb size windows. GWAS indicated 31 regions in association with navel length, one coat region, and four SC-related regions. In these regions, 4 quantitative loci (QTLs) related to navel length and 5 with SC were identified, as for the coat, the QTLs detected did not present previously described relation with this trait. Among the candidate genes in the associated regions, 7 genes were cited in previous studies, with biological functions related to navel length, one for coat and three for SC. The candidate genes TMEM176A and TMEM176AB, which are orthologous in humans, are in association with navel's trait and compose the Androgen Induced 1 cluster. The identification of genes and QTLs, with a function related to the studied traits, previously described in the literature, reinforces the evidence that the found regions are associated with navel length, coat and SC. This information may contribute to the understanding of the genetic architecture involved with of these traits, to guiding genetic validation studies, gene introgression and contribute to include information concerning molecular markers in genetic evaluation of animal improvement programs. 650 $aSingle nucleotide polymorphism 653 $aGWAS 653 $aInference Bayesian 653 $aPolymorphisms 700 1 $aSIQUEIRA, F. 700 1 $aSANTIAGO, G. G. 700 1 $aREGITANO, L. C. de A. 700 1 $aSOUZA JÚNIOR, M. D. de 700 1 $aTORRES JúNIOR, R. A. de A. 700 1 $aNASCIMENTO, A. V. do 700 1 $aGRISOLIA, A. B. 773 $tLivestock Science$gv. 210, p. 33-38, April 2018
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Registro original: |
Embrapa Gado de Corte (CNPGC) |
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Registro Completo
Biblioteca(s): |
Embrapa Gado de Leite. |
Data corrente: |
21/08/2015 |
Data da última atualização: |
27/06/2023 |
Tipo da produção científica: |
Capítulo em Livro Técnico-Científico |
Autoria: |
BRIGHENTI, A. M.; MULLER, M. D.; CARNEVALLI, R. A.; ROCHA, W. S. D. da; MORENZ, M. J. F.; CALSAVARA, L. H. F.; SOUZA SOBRINHO, F. de; ANDRADE, P. J. M.; MARTINS, C. E. |
Afiliação: |
ALEXANDRE MAGNO B DOS SANTOS, CNPGL; MARCELO DIAS MULLER, CNPGL; ROBERTA APARECIDA CARNEVALLI, CPAMT; WADSON SEBASTIAO DUARTE DA ROCHA, CNPGL; MIRTON JOSE FROTA MORENZ, CNPGL; LEONARDO HENRIQUE FERREIRA CALSAVARA, EMATER MG; FAUSTO DE SOUZA SOBRINHO, CNPGL; PAULINO JOSE MELO ANDRADE, CNPGL; CARLOS EUGENIO MARTINS, CNPGL. |
Título: |
Estratégia de integração lavoura-pecuária-floresta como alternativa de manejo sustentável para a produção de leite. |
Ano de publicação: |
2015 |
Fonte/Imprenta: |
In: CORDEIRO, L. A. M.; VILELA, L.; KLUTHCOUSKI, J.; MARCHAO, R. L. (ed.). Integração lavoura-pecuária-floresta: o produtor pergunta, a Embrapa responde. Brasília, DF: Embrapa, 2015. |
Páginas: |
p. 243-258. |
Idioma: |
Português |
Palavras-Chave: |
Espécies forrageiras; ILPF; Vacas leiteiras. |
Thesagro: |
Adubação; Produtividade. |
Categoria do assunto: |
F Plantas e Produtos de Origem Vegetal |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1022507/1/Estrategia-de-Integracao-lavoura-pecuria-floresta.pdf
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Marc: |
LEADER 00988naa a2200277 a 4500 001 2022507 005 2023-06-27 008 2015 bl uuuu u00u1 u #d 100 1 $aBRIGHENTI, A. M. 245 $aEstratégia de integração lavoura-pecuária-floresta como alternativa de manejo sustentável para a produção de leite.$h[electronic resource] 260 $c2015 300 $ap. 243-258. 650 $aAdubação 650 $aProdutividade 653 $aEspécies forrageiras 653 $aILPF 653 $aVacas leiteiras 700 1 $aMULLER, M. D. 700 1 $aCARNEVALLI, R. A. 700 1 $aROCHA, W. S. D. da 700 1 $aMORENZ, M. J. F. 700 1 $aCALSAVARA, L. H. F. 700 1 $aSOUZA SOBRINHO, F. de 700 1 $aANDRADE, P. J. M. 700 1 $aMARTINS, C. E. 773 $tIn: CORDEIRO, L. A. M.; VILELA, L.; KLUTHCOUSKI, J.; MARCHAO, R. L. (ed.). Integração lavoura-pecuária-floresta: o produtor pergunta, a Embrapa responde. Brasília, DF: Embrapa, 2015.
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Embrapa Gado de Leite (CNPGL) |
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