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|
| Registros recuperados : 59 | |
| 5. |  | SIMON, M. V.; RESENDE, L. V.; BENKO-ISEPPON, A. M.; WINTER, P.; KAHI, G. Aplicabilidade do fingerprinting de DNA na determinação da diversidade genética intra e interespecífica do gênero Vigna. Horticultura Brasileira, Brasília, v. 20, n. 2, jul. 2002. Suplemento 2. Trabalho apresentado no 42º Congresso Brasileiro de Olericultura, 2002. Publicado também como resumo em: Horticultura Brasileira, Brasília, v. 20, n. 2, p. 306, jul. 2002. Suplemento 1.| Biblioteca(s): Embrapa Hortaliças. |
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| 6. | | VASCONCELOS, S.; SOUZA, A. A. de; GUSMÃO, C. L. S.; MILANI, M.; BENKO-ISEPPON, A. M.; BRASILEIRO-VIDAL, A. C. Heterochromatin and rDNA 5S and 45S sites as reliable cytogenetic markers for castor bean (Ricinus communis, euphorbiaceae). Micron, n. 41, p. 746-753, 2010.| Biblioteca(s): Embrapa Algodão. |
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| 7. | | SILVA, M. L. da; QUEIROZ, M. A. de; FERREIRA, M. A. J. F.; BENKO-ISEPPON, A. M. Caracterização molecular por ISSR de acessos de melancia do Banco Ativo de Germoplasma de Cucurbitáceas. Horticultura Brasileira, v. 30, n. 2, p. S4445-S4451, jul. 2012. 1 CD-R0M. Suplemento. Edição dos Anais do 52 Congresso Brasileiro de Olericultura, Salvador, jul. 2012.| Biblioteca(s): Embrapa Semiárido. |
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| 8. | | ONOFRE, A. V. C.; AMORIM, L. L. B.; SITTOLIN, I. M.; ROCHA, M. de M.; ANDRADE, G. P.; PIO-RIBEIRO, G.; KIDO, E. A.; BENKO-ISEPPON, A. M. Bulked segregant analysis for identification of DAF markers linked to resistance to CPSMV in cowpea. Tropical Plant Pathology, v. 34, p. S162, ago. 2009. Suplemento. Ref. 562. Edição dos Resumos do 42° Congresso Brasileiro de Fitopatologia, Rio de Janeiro, ago. 2009.| Biblioteca(s): Embrapa Meio-Norte. |
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| 9. | | FERREIRA-NETO, J. R. C.; SILVA, M. D. da; BENKO-ISEPPON, A. M.; PANDOLFI, V.; BINNECK, E.; NEPOMUCENO, A. L.; ABDELNOOR, R. V.; KIDO, E. A. Inositol phosphates and Raffinose family oligosaccharides pathways: Structural genomics and transcriptomics in soybean under root dehydration Plant Gene, v. 20, 100202, 2019. 13 p.| Biblioteca(s): Embrapa Soja. |
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| 11. | | BELARMINO, L. C.; OLIVEIRA, A. R. da S.; BRASILEIRO-VIDAL, A. C.; BORTOLETI, K. C. de A.; BEZERRA-NETO, J. P.; ABDELNOOR, R. V.; BENKO-ISEPPON, A. M. Mining plant genome browsers as a means for efficient connection of physical, genetic and cytogenetic mapping: an example using soybean. Genetics and Molecular Biology, Ribeirão Preto, v. 35, n. 1, suppl., p. 335-347, May 2012.| Biblioteca(s): Embrapa Soja. |
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| 12. | | BORTOLETI, K. C. A.; ABDELNOOR, R. V.; BENKO-ISEPPON, A. M.; BELARMINO, L. C. S.; OLIVEIRA, A. R. S.; NASCIMENTO, I. R.; BRASILEIRO-VIDAL, A. C. Distribuição de microssatélites no genoma de leguminosas mediante hibridização in situ fluorescente. In: CONGRESSO BRASILEIRO DE GENÉTICA, 56., 2010, Guarujá. Resumos... [Curitiba]: UFPR, 2010. p. 115.| Biblioteca(s): Embrapa Soja. |
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| 13. | | SOARES-CAVALCANTI, N. M.; BELARMINO, L. C.; KIDO, E. A.; PANDOLFI, V.; MARCELINO-GUIMARÃES, F. C.; RODRIGUES, F. A.; PEREIRA, G. A. G.; BENKO-ISEPPON, A. M. Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula. Genetics and Molecular Biology, Ribeirão Preto, v. 35, n. 1, suppl., p. 247-259, May 2012.| Biblioteca(s): Embrapa Soja. |
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| 14. | | KIDO, E. A.; PANDOLFI, V.; HOULLOU-KIDO, L. M.; ANDRADE, F. C.; MARCELINO, F. C.; NEPOMUCENO, A. L.; ABDELNOOR, R. V.; BURNQUIST, W. L.; BENKO-ISEPPON, A. M. Plant antimicrobial peptides: an overview of superSAGE transcriptional profile and a functional review. Current Protein & Peptide Science, v. 11, n. 3, p. 220-230, May 2010.| Biblioteca(s): Embrapa Soja. |
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| 15. | | SILVA, J. B.; SILVA, R. L. de O.; BARROS, A. A. G. de; ABURJAILE, F. F.; MELO, N. F. de; BENKO-ISEPPON, A. M. Receptor-like proteins (RLPs) in the transcriptome of Vitis spp. under inoculation of Xanthomonas citri. In: BRAZILIAN CONGRESS OF GENETICS, 66.; SIMPÓSIO DE CITOGENÉTICA E GENÉTICAS DE PEIXES, 19.; REUNIÃO DE GENÉTICA DE MICRORGANISMOS, 32.; CONGRESSO LATINO-AMERICANO DE GENÉTICA PARA CONSERVAÇÃO, 2., 2021, Ribeirão Preto. Abstracts. Ribeirão Preto: SBG, 2021. p. 590.| Biblioteca(s): Embrapa Semiárido. |
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| 16. | | LIMA, A. T. B.; DAMASCENO-SILVA, K. J.; ROCHA, M. M.; BENKO-ISEPPON, A. M.; KIDO, E. A.; AMORIM, L. L. B.; ONOFRE, A. V. C. Seleção de primers visando identificação de marcas DAF associados a QTL'S em feijão-caupi. In: CONGRESSO NACIONAL DE FEIJÃO-CAUPI, 2., 2009, Belém, PA. Da agricultura de subsistência ao agronegócio: anais. Belém, PA: Embrapa Amazônia Oriental, 2009. p. 831-835. 1 CD-ROM. Autoria: DAMASCENO-SILVA, K. J. [i.e. SILVA, K. J. D. e]| Biblioteca(s): Embrapa Meio-Norte. |
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| 17. | | SODRZEIESKI, P. A.; FERREIRA-NETO, J. R. C.; ABURJAILE, F. F.; MARCELINO-GUIMARÃES, F. C.; SILVA, C. A. S.; BENKO-ISEPPON, A. M. Genome sequencing of soybean (Glycine max) access resistant to asian soybean rust (Phakopsora pachyrhizi). In: BRAZILIAN CONGRESS OF GENETICS, 68., 2023, Ouro Preto, MG. Paleogenomics sequencing ancient DNA. Ribeirão Preto: Sociedade Brasileira de Genética, 2023. e-book. p. 421.| Biblioteca(s): Embrapa Soja. |
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| 19. | | KIDO, E. A.; FERREIRA-NETO, J. R. C.; BINNECK, E.; SILVA, M. da; SILVA JUNIOR, W. da; BENKO-ISEPPON, A. M. Explore the RNA-sequencing and the next-generation sequencing in crops responding to abiotic stress. In: SHARMA, P.; YADAV, D.; GAUR, R. K. (ed.). Bioinformatics in Agriculture: Next Generation Sequencing Era. [S. l.]: Elsevier Academic Press, c2022. CHAP. 10, p. 161-175.| Biblioteca(s): Embrapa Soja. |
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| 20. | | LIMA, B. E. de A.; SILVA, J. S. da; BARBOZA, J.; MELO, N. F. de; BENKO-ISEPPON, A. M.; SILVA, R. L. de O. Caracterização estrutura da família gênica GRAS em Vitis spp. inoculadas com Xanthomona citri. In: CURSO DE VERÃO EM GENÉTICA, 4., 2021, Goiânia. Anais... Goiânia: Universidade Federal de Goiás, 2021.| Biblioteca(s): Embrapa Semiárido. |
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| Registros recuperados : 59 | |
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 | Acesso ao texto completo restrito à biblioteca da Embrapa Semiárido. Para informações adicionais entre em contato com cpatsa.biblioteca@embrapa.br. |
Registro Completo
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Biblioteca(s): |
Embrapa Semiárido; Embrapa Soja. |
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Data corrente: |
13/09/2023 |
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Data da última atualização: |
17/01/2024 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 4 |
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Autoria: |
FERREIRA-NETO. J. R. C.; SILVA, M. D. da; BINNECK, E.; MELO, N. F. de; SILVA, R. G. da; MELO, A. L. T. M. de; PANDOLFI, V.; BUSTAMANTE, F. de O.; VIDAL, A. C. B.; BENKO-ISEPPON, A. M. |
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Afiliação: |
JOSÉ RIBAMAR COSTA FERREIRA-NETO, UFPE; MANASSÉS DANIEL DA SILVA, UFPE; ELISEU BINNECK, CNPSO; NATONIEL FRANKLIN DE MELO, CPATSA; RAHISA HELENA DA SILVA; ANA LUIZA TRAJANO MANGUEIRA DE MELO, UFPE; VALESCA PANDOLFI, UFPE; FERNANDA DE OLIVEIRA BUSTAMANTE, UFPE; ANA CHRISTINA BRASILEIRO-VIDAL, UFPE; ANA MARIA BENKO-ISEPPON, UFPE. |
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Título: |
Bridging the gap: combining genomics and transcriptomics approaches to understand Stylosanthes scabra, an orphan legume from the Brazilian Caatinga. |
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Ano de publicação: |
2023 |
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Fonte/Imprenta: |
Plants, v. 12, 3246, 2023. |
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Páginas: |
23 p. |
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DOI: |
10.3390/plants12183246 |
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Idioma: |
Inglês |
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Conteúdo: |
Stylosanthes scabra is a scientifically orphaned legume found in the Brazilian Caatinga biome (a semi-arid environment). This work utilized omics approaches to investigate some ecophysiological aspects of stress tolerance/resistance in S. scabra, study its genomic landscape, and predict potential metabolic pathways. Considering its high-confidence conceptual proteome, 1694 (~2.6%) proteins were associated with resistance proteins, some of which were found in soybean QTL regions that confer resistance to Asian soybean rust. S. scabra was also found to be a potential source of terpenes, as biosynthetic gene clusters associated with terpene biosynthesis were identified in its genome. The analysis revealed that mobile elements comprised approximately 59% of the sequenced genome. In the remaining 41% of the sections, some of the 22,681 protein-coding gene families were categorized into two informational groups: those that were specific to S. scabra and those that expanded significantly compared to their immediate ancestor. Biological process enrichment analyses indicated that hese gene families play fundamental roles in the adaptation of S. scabra to extreme environments. Additionally, phylogenomic analysis indicated a close evolutionary relationship between the genera Stylosanthes and Arachis. Finally, this study found a high number (57) of aquaporin-encoding loci in the S. scabra genome. RNA-Seq and qPCR data suggested that the PIP subfamily may play a key role in the species? adaptation to water deficit conditions. Overall, these results provide valuable insights into S. scabra biology and a wealth of gene/transcript information for future legume omics studies. MenosStylosanthes scabra is a scientifically orphaned legume found in the Brazilian Caatinga biome (a semi-arid environment). This work utilized omics approaches to investigate some ecophysiological aspects of stress tolerance/resistance in S. scabra, study its genomic landscape, and predict potential metabolic pathways. Considering its high-confidence conceptual proteome, 1694 (~2.6%) proteins were associated with resistance proteins, some of which were found in soybean QTL regions that confer resistance to Asian soybean rust. S. scabra was also found to be a potential source of terpenes, as biosynthetic gene clusters associated with terpene biosynthesis were identified in its genome. The analysis revealed that mobile elements comprised approximately 59% of the sequenced genome. In the remaining 41% of the sections, some of the 22,681 protein-coding gene families were categorized into two informational groups: those that were specific to S. scabra and those that expanded significantly compared to their immediate ancestor. Biological process enrichment analyses indicated that hese gene families play fundamental roles in the adaptation of S. scabra to extreme environments. Additionally, phylogenomic analysis indicated a close evolutionary relationship between the genera Stylosanthes and Arachis. Finally, this study found a high number (57) of aquaporin-encoding loci in the S. scabra genome. RNA-Seq and qPCR data suggested that the PIP subfamily may play a key role in the species? ... Mostrar Tudo |
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Palavras-Chave: |
Aquaporinas; Bioma Caatinga; Elementos móveis; Genoma nuclear; PRR-genes; R-genes. |
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Thesagro: |
Leguminosa; Stylosanthes Scabra. |
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Thesaurus NAL: |
Aquaporins; Drought; Nuclear genome. |
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Categoria do assunto: |
G Melhoramento Genético |
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Marc: |
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100 1 $aFERREIRA-NETO. J. R. C.
245 $aBridging the gap$bcombining genomics and transcriptomics approaches to understand Stylosanthes scabra, an orphan legume from the Brazilian Caatinga.$h[electronic resource]
260 $c2023
300 $a23 p.
520 $aStylosanthes scabra is a scientifically orphaned legume found in the Brazilian Caatinga biome (a semi-arid environment). This work utilized omics approaches to investigate some ecophysiological aspects of stress tolerance/resistance in S. scabra, study its genomic landscape, and predict potential metabolic pathways. Considering its high-confidence conceptual proteome, 1694 (~2.6%) proteins were associated with resistance proteins, some of which were found in soybean QTL regions that confer resistance to Asian soybean rust. S. scabra was also found to be a potential source of terpenes, as biosynthetic gene clusters associated with terpene biosynthesis were identified in its genome. The analysis revealed that mobile elements comprised approximately 59% of the sequenced genome. In the remaining 41% of the sections, some of the 22,681 protein-coding gene families were categorized into two informational groups: those that were specific to S. scabra and those that expanded significantly compared to their immediate ancestor. Biological process enrichment analyses indicated that hese gene families play fundamental roles in the adaptation of S. scabra to extreme environments. Additionally, phylogenomic analysis indicated a close evolutionary relationship between the genera Stylosanthes and Arachis. Finally, this study found a high number (57) of aquaporin-encoding loci in the S. scabra genome. RNA-Seq and qPCR data suggested that the PIP subfamily may play a key role in the species? adaptation to water deficit conditions. Overall, these results provide valuable insights into S. scabra biology and a wealth of gene/transcript information for future legume omics studies.
650 $aAquaporins
650 $aDrought
650 $aNuclear genome
650 $aLeguminosa
650 $aStylosanthes Scabra
653 $aAquaporinas
653 $aBioma Caatinga
653 $aElementos móveis
653 $aGenoma nuclear
653 $aPRR-genes
653 $aR-genes
700 1 $aSILVA, M. D. da
700 1 $aBINNECK, E.
700 1 $aMELO, N. F. de
700 1 $aSILVA, R. G. da
700 1 $aMELO, A. L. T. M. de
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773 $tPlants$gv. 12, 3246, 2023.
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