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Registro Completo |
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Biblioteca(s): |
Embrapa Soja. |
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Data corrente: |
30/06/2014 |
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Data da última atualização: |
07/04/2022 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
SIQUEIRA, A. F.; ORMEÑO-ORRILLO, E.; SOUZA, R. C.; RODRIGUES, E. P.; ALMEIDA, L. G. P.; BARCELLOS, F. G.; BATISTA, J. S. S.; NAKATANI, A. S.; MARTÍNEZ-ROMERO, E.; VASCONCELOS, A. T. R.; HUNGRIA, M. |
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Afiliação: |
ARTHUR FERNANDES SIQUEIRA, UEL; ERNESTO ORMEÑO-ORRILLO, Universidad Nacional Autónoma de México; RANGEL CELSO SOUZA, Laboratório Nacional de Computação Científica; ELISETE PAINS RODRIGUES, UEL; LUIZ GONZAGA PAULA ALMEIDA, Laboratório Nacional de Computação Científica; FERNANDO GOMES BARCELLOS, UEL; JESIANE STEFÂNIA SILVA BATISTA, UEPG; ANDRE SHIGUEYOSHI NAKATANI; ESPERANZA MARTÍNEZ-ROMERO, Universidad Nacional Autónoma de México; ANA TEREZA RIBEIRO VASCONCELOS, Laboratório Nacional de Computação Científica; MARIANGELA HUNGRIA DA CUNHA, CNPSO. |
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Título: |
Comparative genomics of Bradyrhizobium japonicum CPAC 15 and Bradyrhizobium diazoefficiens CPAC 7: elite model strains for understanding symbiotic performance with soybean. |
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Ano de publicação: |
2014 |
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Fonte/Imprenta: |
BMC Genomics, v. 15, n. 420, June 2014. |
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Páginas: |
20 p. |
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ISSN: |
1471-2164 |
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DOI: |
10.1186/1471-2164-15-420 |
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Idioma: |
Inglês |
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Conteúdo: |
The soybean-Bradyrhizobium symbiosis can be highly efficient in fixing nitrogen, but few genomic sequences of elite inoculant strains are available. Here we contribute with information on the genomes of two commercial strains that are broadly applied to soybean crops in the tropics. B. japonicum CPAC 15 (=SEMIA 5079) is outstanding in its saprophytic capacity and competitiveness, whereas B. diazoefficiens CPAC 7 (=SEMIA 5080) is known for its high efficiency in fixing nitrogen. Both are well adapted to tropical soils. The genomes of CPAC 15 and CPAC 7 were compared to each other and also to those of B. japonicum USDA 6T and B. diazoefficiens USDA 110T. Differences in genome size were found between species, with B. japonicum having larger genomes than B. diazoefficiens. Although most of the four genomes were syntenic, genome rearrangements within and between species were observed, including events in the symbiosis island. In addition to the symbiotic region, several genomic islands were identified. Altogether, these features must confer high genomic plasticity that might explain adaptation and differences in symbiotic performance. It was not possible to attribute known functions to half of the predicted genes. About 10% of the genomes was composed of exclusive genes of each strain, but up to 98% of them were of unknown function or coded for mobile genetic elements. In CPAC 15, more genes were associated with secondary metabolites, nutrient transport, iron-acquisition and IAA metabolism, potentially correlated with higher saprophytic capacity and competitiveness than seen with CPAC 7. In CPAC 7, more genes were related to the metabolism of amino acids and hydrogen uptake, potentially correlated with higher efficiency of nitrogen fixation than seen with CPAC 15. Several differences and similarities detected between the two elite soybean-inoculant strains and between the two species of Bradyrhizobium provide new insights into adaptation to tropical soils, efficiency of N2 fixation, nodulation and competitiveness. MenosThe soybean-Bradyrhizobium symbiosis can be highly efficient in fixing nitrogen, but few genomic sequences of elite inoculant strains are available. Here we contribute with information on the genomes of two commercial strains that are broadly applied to soybean crops in the tropics. B. japonicum CPAC 15 (=SEMIA 5079) is outstanding in its saprophytic capacity and competitiveness, whereas B. diazoefficiens CPAC 7 (=SEMIA 5080) is known for its high efficiency in fixing nitrogen. Both are well adapted to tropical soils. The genomes of CPAC 15 and CPAC 7 were compared to each other and also to those of B. japonicum USDA 6T and B. diazoefficiens USDA 110T. Differences in genome size were found between species, with B. japonicum having larger genomes than B. diazoefficiens. Although most of the four genomes were syntenic, genome rearrangements within and between species were observed, including events in the symbiosis island. In addition to the symbiotic region, several genomic islands were identified. Altogether, these features must confer high genomic plasticity that might explain adaptation and differences in symbiotic performance. It was not possible to attribute known functions to half of the predicted genes. About 10% of the genomes was composed of exclusive genes of each strain, but up to 98% of them were of unknown function or coded for mobile genetic elements. In CPAC 15, more genes were associated with secondary metabolites, nutrient transport, iron-acquisition and IAA ... Mostrar Tudo |
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Thesagro: |
Soja. |
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Thesaurus Nal: |
Soybeans. |
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Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/104186/1/Comparative-genomics-of-Bradyrhizobium-japonicum-CPAC-15-and-Bradyrhizobium-diazoefficiens-CPAC-7-elite-model-strains-for-understanding-symbiotic-performance-with-soybean.pdf
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Marc: |
LEADER 02978naa a2200301 a 4500
001 1989259
005 2022-04-07
008 2014 bl uuuu u00u1 u #d
022 $a1471-2164
024 7 $a10.1186/1471-2164-15-420$2DOI
100 1 $aSIQUEIRA, A. F.
245 $aComparative genomics of Bradyrhizobium japonicum CPAC 15 and Bradyrhizobium diazoefficiens CPAC 7$belite model strains for understanding symbiotic performance with soybean.$h[electronic resource]
260 $c2014
300 $a20 p.
520 $aThe soybean-Bradyrhizobium symbiosis can be highly efficient in fixing nitrogen, but few genomic sequences of elite inoculant strains are available. Here we contribute with information on the genomes of two commercial strains that are broadly applied to soybean crops in the tropics. B. japonicum CPAC 15 (=SEMIA 5079) is outstanding in its saprophytic capacity and competitiveness, whereas B. diazoefficiens CPAC 7 (=SEMIA 5080) is known for its high efficiency in fixing nitrogen. Both are well adapted to tropical soils. The genomes of CPAC 15 and CPAC 7 were compared to each other and also to those of B. japonicum USDA 6T and B. diazoefficiens USDA 110T. Differences in genome size were found between species, with B. japonicum having larger genomes than B. diazoefficiens. Although most of the four genomes were syntenic, genome rearrangements within and between species were observed, including events in the symbiosis island. In addition to the symbiotic region, several genomic islands were identified. Altogether, these features must confer high genomic plasticity that might explain adaptation and differences in symbiotic performance. It was not possible to attribute known functions to half of the predicted genes. About 10% of the genomes was composed of exclusive genes of each strain, but up to 98% of them were of unknown function or coded for mobile genetic elements. In CPAC 15, more genes were associated with secondary metabolites, nutrient transport, iron-acquisition and IAA metabolism, potentially correlated with higher saprophytic capacity and competitiveness than seen with CPAC 7. In CPAC 7, more genes were related to the metabolism of amino acids and hydrogen uptake, potentially correlated with higher efficiency of nitrogen fixation than seen with CPAC 15. Several differences and similarities detected between the two elite soybean-inoculant strains and between the two species of Bradyrhizobium provide new insights into adaptation to tropical soils, efficiency of N2 fixation, nodulation and competitiveness.
650 $aSoybeans
650 $aSoja
700 1 $aORMEÑO-ORRILLO, E.
700 1 $aSOUZA, R. C.
700 1 $aRODRIGUES, E. P.
700 1 $aALMEIDA, L. G. P.
700 1 $aBARCELLOS, F. G.
700 1 $aBATISTA, J. S. S.
700 1 $aNAKATANI, A. S.
700 1 $aMARTÍNEZ-ROMERO, E.
700 1 $aVASCONCELOS, A. T. R.
700 1 $aHUNGRIA, M.
773 $tBMC Genomics$gv. 15, n. 420, June 2014.
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Registro original: |
Embrapa Soja (CNPSO) |
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Biblioteca |
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| Registros recuperados : 4.936 | |
| 143. |  | SOJA: a jóia brasileira. Londrina: Embrapa Soja, 2004. 1 folder.| Tipo: Folder/Folheto/Cartilha |
| Biblioteca(s): Embrapa Soja. |
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| 144. | | TAVARES, L. C. V.; SEIXAS, C. D. S. Soja orgânica. In: OLIVEIRA, A. B. de; LEITE, R. M. V. B. de C.; SEIXAS, C. D. S.; KERN, H. S. Soja: o produtor pergunta, a Embrapa responde. Brasília, DF: Embrapa, 2019. (Coleção 500 perguntas, 500 respostas). p. 251-258.| Tipo: Capítulo em Livro Técnico-Científico |
| Biblioteca(s): Embrapa Soja. |
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| 147. | | OLIVEIRA, L. J.; HOFFMANN-CAMPO, C. B. Sources of soybean resistance to Sternechus subsignatus. In: WORLD SOYBEAN RESEARCH CONFERENCE, 7.; INTERNATIONAL SOYBEAN PROCESSING AND UTILIZATION CONFERENCE, 4.; CONGRESSO BRASILEIRO DE SOJA, 3., 2004, Foz do Iguassu. Abstracts of contributed papers and posters. Londrina: Embrapa Soybean, 2004. p. 292. (Embrapa Soja. Documentos, 228). Editado por Flávio Moscardi, Clara Beatriz Hoffmann-Campo, Odilon Ferreira Saraiva, Paulo Roberto Galerani, Francisco Carlos Krzyzanowski, Mercedes Concordia Carrão-Panizzi.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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| 148. | | GRADE, L. C.; MOREIRA, A. A.; VAREA, G. da S.; MANDARINO, J. M. G.; SILVA, J. B. da; IDA, E. I.; RIBEIRO, M. L. L. Soybean B-Glucosidase immobilisated on chitosan beads and its applicaation in soy drink increase the Aglycones. Brazilian Archives of Biology and Technology, Curitiba, v. 57, n. 5, p. 766-773, Sept./Oct. 2014.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 1 |
| Biblioteca(s): Embrapa Soja. |
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| 150. | | MENDES, I. de C.; REIS JUNIOR, F. B. dos; HUNGRIA, M. Soybean yield and nodule occupancy as a function of yearly inoculation in the Brazilian Cerrados. In.: IBEROAMERICAN CONFERENCE ON BENEFICIAL PLANT - MICROORGANISM - ENVIRONMENT INTERACTIONS, 2.; NATIONAL MEETING OF THE SPANISH SOCIETY OF NITROGEN FIXATION, 14.; LATIN AMERICAN MEETING ON RHIZOBIOLOGY, 26.; SPANISH-PORTUGUESE CONGRESS ON NITROGEN FIXATION, 3., 2013, Sevilla. Microorganisms for future agriculture. Sevilla: Universidad de Sevilla; ALAR; SEFIN, 2013. p. 457-458.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Cerrados. |
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| 152. | | FUGANTI, R.; SILVA, J. F. V.; ARIAS, C. A. A.; MARIN, S. R. SSR markers associated with resistance to Meloidogyne javanica in soybean. Nematology, Boston, v. 4, n. 2, p. 231, 2002. Presented in Fourth International Congress of Nematology. Programme and abstracts. 8-13 June 2002, Tenbel, La Galletas, Arona, Tenerife, Canary Islands, Spain.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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| 153. | | ALMEIDA JUNIOR, L. A. de; FRANÇA-NETO, J. B.; KRZYZANOWSKI, F. C.; HENNING, F. A. Volume de calda e aplicação de pó secante na qualidade fisiológica de sementes de soja. In: JORNADA ACADÊMICA DA EMBRAPA SOJA, 18., 2023, Londrina. Resumos expandidos... Londrina: Embrapa Soja, 2023. (Embrapa Soja. Documentos, 453). Regina Maria Villas Bôas de Campos Leite, Larissa Alexandra Cardoso Moraes, Kelly Catharin, Editoras Técnicas. p. 93-98.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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| 155. | | HOFFMANN-CAMPO, C. B.; PIUBELLI, G. C.; OLIVEIRA, L. J.; TOLEDO, A. M.; MENDES, A. C. F.; MIYAKUBO, S. H. Avaliação de genótipos, mecanismos e o papel dos flavonóides na característica de resistência de soja. In: REUNIÃO DE PESQUISA DE SOJA DA REGIÃO CENTRAL DO BRASIL, 25., 2003, Uberaba. Resumos... Londrina: Embrapa Soja: EPAMIG: Fundação Triângulo, 2003. p. 231-232. (Embrapa Soja. Documentos, 209). Organizado por Odilon Ferreira Saraiva, Regina Maria Villas Boas de Campos Leite.| Tipo: Capítulo em Livro Técnico-Científico |
| Biblioteca(s): Embrapa Soja. |
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| 156. | | DEBIASI, H.; MORAES, M. T.; FRANCHINI, J. C.; DIAS, W. P.; SILVA, J. F. V.; GOULART, A. M. C.; RIBAS, L. N. Atributos químicos de solo relacionados à população e danos do nematoide das lesões radiculares em soja. In: REUNIÃO DE PESQUISA DE SOJA DA REGIÃO CENTRAL DO BRASIL, 32., 2011, São Pedro, SP. Resumos expandidos... Londrina: Embrapa Soja, 2011. p. 310-312. Editado por Adilson de Oliveira Junior, Odilon Ferreira Saraiva, Regina Maria Villas Bôas de Campos Leite.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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| 157. | | BALBINOT JUNIOR, A. A.; SANTOS, E. L.; DEBIASI, H.; RIBEIRO, R.; FRANCHINI, J. C. Agrupamento de plantas de soja na linha de semeadura e seu efeito no desempenho da cultura. In: REUNIÃO DE PESQUISA DE SOJA, 36., 2017, Londrina, PR. Resumos expandidos... Londrina: Embrapa Soja, 2017. p. 21-23. (Embrapa Soja. Documentos, 388). Editado por Alvadi Antonio Balbinot Junior, Fernando Augusto Henning, Regina Maria Villas Bôas de Campos Leite.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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| 160. | | CASTRO, C. de; OLIVEIRA JUNIOR, A.; OLIVEIRA, F. A.; MOREIRA, A.; JORDÃO, L. T. Adubação da soja: o ocaso do potássio. In: REUNIÃO DE PESQUISA DE SOJA DA REGIÃO CENTRAL DO BRASIL, 32., 2011, São Pedro, SP. Resumos expandidos... Londrina: Embrapa Soja, 2011. p. 307-309. Editado por Adilson de Oliveira Junior, Odilon Ferreira Saraiva, Regina Maria Villas Bôas de Campos Leite. Resumo expandido, também apresentado no WORKSHOP CTC AGRICULTURA, 10., 2011, Rio Verde. Geração e difusão de tecnologias: resultados 2011. Rio Verde: Centro Tecnológico Comigo, 2011. p. 10-14.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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| Registros recuperados : 4.936 | |
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