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 | Acesso ao texto completo restrito à biblioteca da Embrapa Mandioca e Fruticultura. Para informações adicionais entre em contato com cnpmf.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Mandioca e Fruticultura. |
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Data corrente: |
09/02/2009 |
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Data da última atualização: |
06/07/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
OLIVEIRA, E. J.; VIEIRA, M. L. C.; GARCIA, A. A. F.; MUNHOZ, C. F.; MARGARIDO, G. R. A.; CONSOLI, L.; MATTA, F. P.; MORAES, M. C.; ZUCCHI, M. I.; FUNGARO, M. H. P. |
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Afiliação: |
Eder Jorge de Oliveira, CNPMF; Maria Lucia C. Vieira, ESALQ/USP; Antônio Augusto F. Garcia, ESALQ/USP; Carla F. Munhoz, ESALQ/USP; Gabriel R. A. Margarido, ESALQ/USP; Luciano Consoli, ESALQ/USP; Frederico P. Matta, ESALQ/USP; Michel C. Moraes, ESALQ/USP; Maria I. Zucchi, IAC; Maria Helena P. Fungaro, UEL. |
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Título: |
An integrated molecular map yellow passion fruit based on simultaneous maximum-likelihood estimation of linkage and linkage phases. |
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Ano de publicação: |
2008 |
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Fonte/Imprenta: |
Journal of the American Society Horticultural Science, Mount Vernon, v. 133, n. 1, p. 35-41, jan. 2008. |
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Descrição Física: |
il. |
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ISSN: |
0003-1062 |
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Idioma: |
Inglês |
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Conteúdo: |
The development of genetic maps for auto-incompatible species, such as the yellow passion fruit (Passiflora edulis Sims f. flavicarpa Deg.) is restricted due to the unfeasibility of obtaining traditional mapping populations based on inbred lines. For this reason, yellow passion fruit linkage maps were generally constructed using a strategy known as two-way pseudo-testcross, based on monoparental dominant markers segregating in a 1:1 fashion. Due to the lack of information from these markers in one of the parents, two individual (parental) maps were obtained. However, integration of these maps is essential, and biparental markers can be used for such an operation. The objective of our study was to construct an integrated molecular map for a full-sib population of yellow passion fruit combining different loci configuration generated from amplified fragment length polymorphisms (AFLPs) and microsatellite markers and using a novel approach based on simultaneous maximum-likelihood estimation of linkage and linkage phases, specially designed for outcrossing species. Of the total number of loci, 76%, 21%, 0.7%, and 2.3% did segregate in 1:1, 3:1, 1:2:1, and 1:1:1:1 ratios, respectively. Ten linkage groups (LGs) were established with a logarithm of the odds (LOD) score 5.0 assuming a recombination fraction 0.35. On average, 24 markers were assigned per LG, representing a total map length of 1687 cM, with a marker density of 6.9 cM. No markers were placed as accessories on the map as was done with previously constructed individual maps. MenosThe development of genetic maps for auto-incompatible species, such as the yellow passion fruit (Passiflora edulis Sims f. flavicarpa Deg.) is restricted due to the unfeasibility of obtaining traditional mapping populations based on inbred lines. For this reason, yellow passion fruit linkage maps were generally constructed using a strategy known as two-way pseudo-testcross, based on monoparental dominant markers segregating in a 1:1 fashion. Due to the lack of information from these markers in one of the parents, two individual (parental) maps were obtained. However, integration of these maps is essential, and biparental markers can be used for such an operation. The objective of our study was to construct an integrated molecular map for a full-sib population of yellow passion fruit combining different loci configuration generated from amplified fragment length polymorphisms (AFLPs) and microsatellite markers and using a novel approach based on simultaneous maximum-likelihood estimation of linkage and linkage phases, specially designed for outcrossing species. Of the total number of loci, 76%, 21%, 0.7%, and 2.3% did segregate in 1:1, 3:1, 1:2:1, and 1:1:1:1 ratios, respectively. Ten linkage groups (LGs) were established with a logarithm of the odds (LOD) score 5.0 assuming a recombination fraction 0.35. On average, 24 markers were assigned per LG, representing a total map length of 1687 cM, with a marker density of 6.9 cM. No markers were placed as accessories on the map as... Mostrar Tudo |
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Palavras-Chave: |
AFLP; flavicarpa; Linkage map integration; Microsatellite; Multipoint distance; Outcrossing specie; Passiflora edulis f. |
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Thesagro: |
Maracujá; Marcador Molecular. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 02652naa a2200361 a 4500
001 1655525
005 2023-07-06
008 2008 bl uuuu u00u1 u #d
022 $a0003-1062
100 1 $aOLIVEIRA, E. J.
245 $aAn integrated molecular map yellow passion fruit based on simultaneous maximum-likelihood estimation of linkage and linkage phases.$h[electronic resource]
260 $c2008
300 $cil.
520 $aThe development of genetic maps for auto-incompatible species, such as the yellow passion fruit (Passiflora edulis Sims f. flavicarpa Deg.) is restricted due to the unfeasibility of obtaining traditional mapping populations based on inbred lines. For this reason, yellow passion fruit linkage maps were generally constructed using a strategy known as two-way pseudo-testcross, based on monoparental dominant markers segregating in a 1:1 fashion. Due to the lack of information from these markers in one of the parents, two individual (parental) maps were obtained. However, integration of these maps is essential, and biparental markers can be used for such an operation. The objective of our study was to construct an integrated molecular map for a full-sib population of yellow passion fruit combining different loci configuration generated from amplified fragment length polymorphisms (AFLPs) and microsatellite markers and using a novel approach based on simultaneous maximum-likelihood estimation of linkage and linkage phases, specially designed for outcrossing species. Of the total number of loci, 76%, 21%, 0.7%, and 2.3% did segregate in 1:1, 3:1, 1:2:1, and 1:1:1:1 ratios, respectively. Ten linkage groups (LGs) were established with a logarithm of the odds (LOD) score 5.0 assuming a recombination fraction 0.35. On average, 24 markers were assigned per LG, representing a total map length of 1687 cM, with a marker density of 6.9 cM. No markers were placed as accessories on the map as was done with previously constructed individual maps.
650 $aMaracujá
650 $aMarcador Molecular
653 $aAFLP
653 $aflavicarpa
653 $aLinkage map integration
653 $aMicrosatellite
653 $aMultipoint distance
653 $aOutcrossing specie
653 $aPassiflora edulis f
700 1 $aVIEIRA, M. L. C.
700 1 $aGARCIA, A. A. F.
700 1 $aMUNHOZ, C. F.
700 1 $aMARGARIDO, G. R. A.
700 1 $aCONSOLI, L.
700 1 $aMATTA, F. P.
700 1 $aMORAES, M. C.
700 1 $aZUCCHI, M. I.
700 1 $aFUNGARO, M. H. P.
773 $tJournal of the American Society Horticultural Science, Mount Vernon$gv. 133, n. 1, p. 35-41, jan. 2008.
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Registro original: |
Embrapa Mandioca e Fruticultura (CNPMF) |
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| 4. |  | CARVALHO, R. S. de; HAJI, F. N. P.; MIRANDA, I. da G.; COUTINHO, C. de C. Monitoramento de moscas das frutas na cultura do mamão (Carica papaya) no Submédio São Francisco. In: CONGRESSO BRASILEIRO DE ENTOMOLOGIA, 15.; ENCONTRO NACIONAL DE FITOSSANITARISTAS, 6.; SIMPÓSIO INTEGRADO DE MANEJO DE PRAGAS, 2., 1995, Caxambu. Resumos... Lavras: ESAL; SEB, 1995. p. 119.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Semiárido. |
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| 6. | | CARVALHO, R. S. de; HAJI, F. N. P.; MIRANDA, I. da G.; NASCIMENTO, A. S. do; COUTINHO, C. de C. Manejo de moscas-das-frutas na cultura da manga na regiao do Submedio Sao Francisco. In: CONGRESSO BRASILEIRO DE FRUTICULTURA, 13., 1994, Salvador. Resumos... Salvador: SBF, 1994. v.2, p. 707-708.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Semiárido. |
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| 7. | | CARVALHO, C. V. de; DOMINGUES, R.; COUTINHO, C. de C.; HONÓRIO, N. T. de B. S.; REIS, D. R. de L.; FERREIRA-MACHADO, A. B.; CARVALHO, W. A.; GASPAR, E. B.; MARTINS, M. F. First report of Moraxella oculi in Brazil in an infectious bovine keratoconjunctivitis outbreak. Veterinary Research Communications, v. 49, article 143, 2025.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Gado de Leite. |
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| 8. | | COUTINHO, C. de C.; CARVALHO, C. V. de; FERREIRA, R. C.; DOMINGUES, R.; REIS, D. R. de L.; MACHADO, A. B. F.; SABINO, Y. N. V.; GASPAR, E. B.; PANETTO, J. C. do C.; MARTINS, M. F. Formação de biofilme por Moraxella spp. isoladas em surtos de Ceratoconjuntivite Infecciosa Bovina no Brasil. In: WORKSHOP DE INICIAÇÃO CIENTÍFICA DA EMBRAPA GADO DE LEITE – PIBIC/CNPq, 29., 2024, Juiz de Fora. Anais [...]. Juiz de Fora: Embrapa Gado de Leite, 2024. p. 63-67.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Leite. |
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| 9. | | FERREIRA, R. C.; HONÓRIO, N. T. de B. S.; COUTINHO, C. de C.; LIMA, L. L.; JESUS, L. M. de; REIS, D. R. de L.; DOMINGUES, R.; MACHADO, M. A.; GASPAR, E. B.; MARTINS, M. F. Desenvolvimento de LAMP PCR para diagnóstico de babesiose causada por Babesia bigemina. In: WORKSHOP DE INICIAÇÃO CIENTÍFICA DA EMBRAPA GADO DE LEITE – PIBIC/CNPq, 29., 2024, Juiz de Fora. Anais [...]. Juiz de Fora: Embrapa Gado de Leite, 2024. p. 58-62.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Leite. |
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| 10. | | CARVALHO, C. V. de; COUTINHO, C. de C.; HONÓRIO, N. T. de B. S.; NOGUEIRA, A. L.; FERREIRA, R. C.; LIMA, L. L.; JESUS, L. M. de; MAGALHÃES, R. L. O. de; SILVA, J. M. A. da; PEREIRA, H. P.; DOMINGUES, R.; REIS, D. R. de L.; MACHADO, M. A.; MARTINS, M. F.; GASPAR, E. B. Isolamento de espécies de Moraxella em um surto de Ceratoconjuntivite Infecciosa em Minas Gerais. In: CONGRESSO DE MICROBIOLOGIA, 3., 2023, Juiz de fora. Doenças infecciosas emergentes: resumos. Universidade Federal de Juiz de Fora, 2023.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Leite. |
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| Registros recuperados : 10 | |
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