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 | Acesso ao texto completo restrito à biblioteca da Embrapa Milho e Sorgo. Para informações adicionais entre em contato com cnpms.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Milho e Sorgo. |
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Data corrente: |
29/01/2009 |
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Data da última atualização: |
24/05/2018 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
WOLFF, J. L.; VALICENTE, F. H.; MARTINS, R.; OLIVEIRA, J. V. de C.; ZANOTTO, P. M. de A. |
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Afiliação: |
José Luiz Caldas Wolff, Universidade de Mogi das Cruzes; FERNANDO HERCOS VALICENTE, CNPMS; Renata Martins, Universidade de Mogi das Cruzes; Juliana Velasco de Castro Oliveira, USP; Paolo Marinho de andrade Zanotto, USP. |
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Título: |
Analysis of the genome of Spodoptera frugiperda nucleopolyhedrovirus (SfMNPV-19) and of the high genomic heterogeneity in group II nucleopolyhedroviruses. |
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Ano de publicação: |
2008 |
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Fonte/Imprenta: |
Journal of General Virology, Cambridge, v. 89, n. 6, p. 1202-1211, 2008. |
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DOI: |
10.1099/vir.0.83581-0 |
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Idioma: |
Inglês |
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Conteúdo: |
The genome of the most virulent among 22 Brazilian geographical isolates of Spodoptera Irugiperda nucleopolyhedrovirus, isolate 19 (SfMNPV-19), was completely sequenced and shown to comprise 132565 bp and 141 open reading frames (ORFs). A total of 11 ORFs with no homology to genes in the GenBank database were found. Of those, four had typical baculovirus promoter motifs and polyadenylation sites. Computer-simulated restriction enzyme cleavage patterns of SfMNPV-19 were compared with published physical maps of other SfMNPV isolates. Differences were observed in terms of the restriction profiles and genome size. Comparison of SfMNPV-19 with the sequence of the SfMNPV isolate 3AP2 indicated that they differed due to a 1427 bp deletion, as well as by a series of smaller deletions and point mutations. The majority of genes of SfMNPV-19 were conserved in the closely related Spodoptera exígua NPV (SeMNPV) and Agrotís segeturn NPV (AgseMNPV-A), but a few regions experienced major changes and rearrangements. Synthenic maps for the genomes of group 11 NPVs revealed that gene collinearity was observed only within certain clusters. Analysis of the dynamics of gene gain and loss along the phylogenetic tree of the NPVs showed that group 11 had only five defining genes and supported the hypothesis that these viruses form ten highly divergent ancient lineages. Crucially, more than 60 % of the gene gain events followed a power-Iaw relation to genetic distance among baculoviruses, indicative of temporal organization in the gene accretion processo. MenosThe genome of the most virulent among 22 Brazilian geographical isolates of Spodoptera Irugiperda nucleopolyhedrovirus, isolate 19 (SfMNPV-19), was completely sequenced and shown to comprise 132565 bp and 141 open reading frames (ORFs). A total of 11 ORFs with no homology to genes in the GenBank database were found. Of those, four had typical baculovirus promoter motifs and polyadenylation sites. Computer-simulated restriction enzyme cleavage patterns of SfMNPV-19 were compared with published physical maps of other SfMNPV isolates. Differences were observed in terms of the restriction profiles and genome size. Comparison of SfMNPV-19 with the sequence of the SfMNPV isolate 3AP2 indicated that they differed due to a 1427 bp deletion, as well as by a series of smaller deletions and point mutations. The majority of genes of SfMNPV-19 were conserved in the closely related Spodoptera exígua NPV (SeMNPV) and Agrotís segeturn NPV (AgseMNPV-A), but a few regions experienced major changes and rearrangements. Synthenic maps for the genomes of group 11 NPVs revealed that gene collinearity was observed only within certain clusters. Analysis of the dynamics of gene gain and loss along the phylogenetic tree of the NPVs showed that group 11 had only five defining genes and supported the hypothesis that these viruses form ten highly divergent ancient lineages. Crucially, more than 60 % of the gene gain events followed a power-Iaw relation to genetic distance among baculoviruses, indicative ... Mostrar Tudo |
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Thesagro: |
Praga de planta. |
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Categoria do assunto: |
O Insetos e Entomologia |
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Marc: |
LEADER 02240naa a2200193 a 4500
001 1491654
005 2018-05-24
008 2008 bl uuuu u00u1 u #d
024 7 $a10.1099/vir.0.83581-0$2DOI
100 1 $aWOLFF, J. L.
245 $aAnalysis of the genome of Spodoptera frugiperda nucleopolyhedrovirus (SfMNPV-19) and of the high genomic heterogeneity in group II nucleopolyhedroviruses.$h[electronic resource]
260 $c2008
520 $aThe genome of the most virulent among 22 Brazilian geographical isolates of Spodoptera Irugiperda nucleopolyhedrovirus, isolate 19 (SfMNPV-19), was completely sequenced and shown to comprise 132565 bp and 141 open reading frames (ORFs). A total of 11 ORFs with no homology to genes in the GenBank database were found. Of those, four had typical baculovirus promoter motifs and polyadenylation sites. Computer-simulated restriction enzyme cleavage patterns of SfMNPV-19 were compared with published physical maps of other SfMNPV isolates. Differences were observed in terms of the restriction profiles and genome size. Comparison of SfMNPV-19 with the sequence of the SfMNPV isolate 3AP2 indicated that they differed due to a 1427 bp deletion, as well as by a series of smaller deletions and point mutations. The majority of genes of SfMNPV-19 were conserved in the closely related Spodoptera exígua NPV (SeMNPV) and Agrotís segeturn NPV (AgseMNPV-A), but a few regions experienced major changes and rearrangements. Synthenic maps for the genomes of group 11 NPVs revealed that gene collinearity was observed only within certain clusters. Analysis of the dynamics of gene gain and loss along the phylogenetic tree of the NPVs showed that group 11 had only five defining genes and supported the hypothesis that these viruses form ten highly divergent ancient lineages. Crucially, more than 60 % of the gene gain events followed a power-Iaw relation to genetic distance among baculoviruses, indicative of temporal organization in the gene accretion processo.
650 $aPraga de planta
700 1 $aVALICENTE, F. H.
700 1 $aMARTINS, R.
700 1 $aOLIVEIRA, J. V. de C.
700 1 $aZANOTTO, P. M. de A.
773 $tJournal of General Virology, Cambridge$gv. 89, n. 6, p. 1202-1211, 2008.
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Embrapa Milho e Sorgo (CNPMS) |
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| Registros recuperados : 3 | |
| 1. |  | BROSSARD, M.; REATTO BRAGA, A.; OLIVEIRA, M. I. L.; BENITO, N. P.; BRUAND, A.; GUIMARÃES, M. F.; LÓPEZ HERNÁNDEZ, D. Análise de interações modelos térmita-solo em ambientes tropicais: impactos na física e geoquímica do solo. In: REUNIÃO BRASILEIRA DE FERTILIDADE DO SOLO E NUTRIÇÃO DE PLANTAS, 28.; REUNIÃO BRASILEIRA SOBRE MICORRIZAS, 12.; SIMPÓSIO BRASILEIRO DE MICROBIOLOGIA DO SOLO, 10.; REUNIÃO BRASILEIRA DE BIOLOGIA DO SOLO, 7., 2008, Londrina. Desafios para o uso do solo com eficiência e qualidade ambiental : anais. Londrina: SBCS: Embrapa Soja: IAPAR: UEL, 2008. 1 CD-ROM FertBio 2008. Palestra.| Tipo: Artigo em Anais de Congresso / Nota Técnica |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 2. | | BROSSARD, M.; BRAGA, A. R. dos S.; OLIVEIRA, M. I. L.; BENITO, N. P.; BRUAND, A.; MARCELINO-GUIMARÃES, F. C.; LÓPEZ HERNÁNDEZ, D. Análise de interações modelos térmita-solo em ambientes tropicais: impactos na física e geoquímica do solo. In: REUNIÃO BRASILEIRA DE FERTILIDADE DO SOLO E NUTRIÇÃO DE PLANTAS, 28.; REUNIÃO BRASILEIRA SOBRE MICORRIZAS, 12.; SIMPÓSIO BRASILEIRO DE MICROBIOLOGIA DO SOLO, 10.; REUNIÃO BRASILEIRA DE BIOLOGIA DO SOLO, 7., 2008, Londrina. Desafios para o uso do solo com eficiência e qualidade ambiental : anais. Londrina: SBCS: Embrapa Soja: IAPAR: UEL, 2008. 1 CD-ROM FertBio 2008. Palestra.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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| 3. | | PHILLIPS, H. R. P.; BACH, E. M.; BARTZ, M. L. C.; BENNETT, J. M.; BEUGNON, R.; BRIONES, M. J. I.; BROWN, G. G.; FERLIAN, O.; GONGALSKY, K. B.; GUERRA, C. A.; KÖNIG-RIES, B.; KREBS, J. J.; ORGIAZZI, A.; RAMIREZ, K. S.; RUSSELL, D. J.; SCHWARZ, B.; WALL, D. H.; BROSE, U.; DECAËNS, T.; LAVELLE, P.; LOREAU, M.; MATHIEU, J.; MULDER, C.; VAN DER PUTTEN, W. H.; RILLIG, M. C.; THAKUR, M. P.; VRIES, F. T. de; WARDLE, D. A.; AMMER, C.; AMMER, S.; ARAI, M.; AYUKE, F. O.; BAKER, G. H.; BARETTA, D.; BARKUSKY, D.; BEAUSÉJOUR, R.; BEDANO, J. C.; BIRKHOFER, K.; BLANCHART, E.; BLOSSEY, B.; BOLGER, T.; BRADLEY, R. L.; BROSSARD, M.; BURTIS, J. C.; CAPOWIEZ, Y.; CAVAGNARO, T. R.; CHOI, A.; CLAUSE, J.; CLUZEAU, D.; COORS, A.; CROTTY, F. V.; CRUMSEY, J. M.; DÁVALOS, A.; COSÍN; DOBSON, A. M.; DOMÍNGUEZ, A.; DUHOUR, A. E.; VAN EEKEREN, N.; EMMERLING, C.; FALCO, L. B.; FERNÁNDEZ, R.; FONTE, S. J.; FRAGOSO, C.; FRANCO, A. L. C.; FUSILERO, A.; GERASKINA, A. P.; GHOLAMI, S.; GONZÁLEZ, G.; GUNDALE, M. J.; LÓPEZ, M. G.; HACKENBERGER, B. K.; HACKENBERGER, D. K.; HERNÁNDEZ, L. M.; HIRTH, J. R.; HISHI, T.; HOLDSWORTH, A. R.; HOLMSTRUP, M.; HOPFENSPERGER, K. N.; LWANGA, E. H.; HUHTA, V.; HURISSO, T. T.; IANNONE III, B. V.; IORDACHE, M.; IRMLER, U.; IVASK, M.; JESÚS, J. B.; JOHNSON-MAYNARD, J. L.; JOSCHKO, M.; KANEKO, N.; KANIANSKA, R.; KEITH, A. M.; KERNECKER, M. L.; KONÉ, A. W.; KOOCH, Y.; KUKKONEN, S. T.; LALTHANZARA, H.; LAMMEL, D. R.; LEBEDEV, I. M.; LE CADRE. E.; LINCOLN, N. K.; LÓPEZ-HERNÁNDEZ, D.; LOSS, S. R.; MARICHAL, R.; MATULA, R.; MINAMIYA, Y.; MOOS, J. H.; MORENO, G.; MORÓN-RÍOS, A.; MOTOHIRO, H.; MUYS, B.; NEIRYNCK, J.; NORGROVE, L.; NOVO, M.; NUUTINEN, V.; NUZZO, V.; RAHMAN, P. M.; PANSU, J.; PAUDEL, S.; PÉRÈS, G.; PÉREZ CAMACHO, L.; PONGE, J.-F.; PRIETZEL, J.; RAPOPORT, I. B.; RASHID, M. I.; REBOLLO, S.; RODRÍGUEZ, M. A.; ROTH, A. M.; ROUSSEAU, G. X.; ROZEN, A.; SAYAD, E.; VAN SCHAIK, L.; SCHARENBROCH, B.; SCHIRRMANN, M.; SCHMIDT, O.; SCHRÖDER, B.; SEEBER, J.; SHASHKOV, M. P.; SINGH, J.; SMITH, S. M.; STEINWANDTER, M.; SZLAVECZ, K.; TALAVERA, J. A.; TRIGO, D.; TSUKAMOTO, J.; URIBE-LÓPEZ, S.; VALENÇA, A. W. de; VIRTO, I.; WACKETT, A. A.; WARREN, M. W.; WEBSTER, E. R.; WEHR, N. H.; WHALEN, J. K.; WIRONEN, M. B.; WOLTERS, V.; WU, P.; ZENKOVA, I. V.; ZHANG, W.; CAMERON, E. K.; EISENHAUER, N. Global data on earthworm abundance, biomass, diversity and corresponding environmental properties. Scientific Data, v. 8, n. 136, 2021. 12 p.| Biblioteca(s): Embrapa Florestas. |
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| Registros recuperados : 3 | |
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