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Registro Completo |
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Biblioteca(s): |
Embrapa Meio Ambiente. |
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Data corrente: |
18/12/2017 |
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Data da última atualização: |
12/03/2018 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
LACERDA JÚNIOR, G. V.; NORONHA, M. F.; SOUSA, S. T. P. de; CABRAL, L.; DOMINGOS, D. F.; SÁBER, M. L.; MELO, I. S. de; OLIVEIRA, V. M. |
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Afiliação: |
GILENO VIEIRA LACERDA JÚNIOR, CPQBA-UNICAMP; MELLINE FONTES NORONHA, CPQBA-UNICAMP; SANDERSON TARCISO PEREIRA DE SOUSA, CPQBA-UNCIAMP; LUCELIA CABRAL, CPQBA-UNICAMP; DANIELA F DOMINGOS, University of California San Diego; MIRIAN L SABER; ITAMAR SOARES DE MELO, CNPMA; VALERIA MAIA OLIVEIRA, CPQBA. |
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Título: |
Potential of semiarid soil from Caatinga biome as a novel source for mining lignocellulose-degrading enzymes. |
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Ano de publicação: |
2017 |
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Fonte/Imprenta: |
FEMS Microbiology Ecology, v. 93, n. 2, p. 1-15, 2017. |
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DOI: |
https://doi.org/10.1093/femsec/fiw248 |
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Idioma: |
Inglês |
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Conteúdo: |
The litterfall is the major organic material deposited in soil of Brazilian Caatinga biome, thus providing the ideal conditions for plant biomass-degrading microorganisms to thrive. Herein, the phylogenetic composition and lignocellulose-degrading capacity have been explored for the first time from a fosmid library dataset of Caatinga soil by sequence-based screening. A complex bacterial community dominated by Proteobacteria and Actinobacteria was unraveled. SEED subsystems-based annotations revealed a broad range of genes assigned to carbohydrate and aromatic compounds metabolism, indicating microbial ability to utilize plant-derived material. CAZy-based annotation identified 7275 genes encoding 37 glycoside hydrolases (GHs) families related to hydrolysis of cellulose, hemicellulose, oligosaccharides and other lignin-modifying enzymes. Taxonomic affiliation of genes showed high genetic potential of the phylum Acidobacteria for hemicellulose degradation, whereas Actinobacteria members appear to play an important role in celullose hydrolysis. Additionally, comparative analyses revealed greater GHs profile similarity among soils as compared to the digestive tract of animals capable of digesting plant biomass, particularly in the hemicellulases content. Combined results suggest a complex synergistic interaction of community members required for biomass degradation into fermentable sugars. This large repertoire of lignocellulolytic enzymes opens perspectives for mining potential candidates of biochemical catalysts for biofuels production from renewable resources and other environmental applications. MenosThe litterfall is the major organic material deposited in soil of Brazilian Caatinga biome, thus providing the ideal conditions for plant biomass-degrading microorganisms to thrive. Herein, the phylogenetic composition and lignocellulose-degrading capacity have been explored for the first time from a fosmid library dataset of Caatinga soil by sequence-based screening. A complex bacterial community dominated by Proteobacteria and Actinobacteria was unraveled. SEED subsystems-based annotations revealed a broad range of genes assigned to carbohydrate and aromatic compounds metabolism, indicating microbial ability to utilize plant-derived material. CAZy-based annotation identified 7275 genes encoding 37 glycoside hydrolases (GHs) families related to hydrolysis of cellulose, hemicellulose, oligosaccharides and other lignin-modifying enzymes. Taxonomic affiliation of genes showed high genetic potential of the phylum Acidobacteria for hemicellulose degradation, whereas Actinobacteria members appear to play an important role in celullose hydrolysis. Additionally, comparative analyses revealed greater GHs profile similarity among soils as compared to the digestive tract of animals capable of digesting plant biomass, particularly in the hemicellulases content. Combined results suggest a complex synergistic interaction of community members required for biomass degradation into fermentable sugars. This large repertoire of lignocellulolytic enzymes opens perspectives for mining potential... Mostrar Tudo |
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Palavras-Chave: |
Caatinga soils; Lignocellulose degradation. |
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Thesagro: |
Bactéria; Biocombustível; Biodegradação; Caatinga; Solo. |
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Thesaurus Nal: |
Lignocellulose; Metagenomics; Semiarid soils. |
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Categoria do assunto: |
S Ciências Biológicas |
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Marc: |
LEADER 02619naa a2200337 a 4500
001 2082786
005 2018-03-12
008 2017 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1093/femsec/fiw248$2DOI
100 1 $aLACERDA JÚNIOR, G. V.
245 $aPotential of semiarid soil from Caatinga biome as a novel source for mining lignocellulose-degrading enzymes.$h[electronic resource]
260 $c2017
520 $aThe litterfall is the major organic material deposited in soil of Brazilian Caatinga biome, thus providing the ideal conditions for plant biomass-degrading microorganisms to thrive. Herein, the phylogenetic composition and lignocellulose-degrading capacity have been explored for the first time from a fosmid library dataset of Caatinga soil by sequence-based screening. A complex bacterial community dominated by Proteobacteria and Actinobacteria was unraveled. SEED subsystems-based annotations revealed a broad range of genes assigned to carbohydrate and aromatic compounds metabolism, indicating microbial ability to utilize plant-derived material. CAZy-based annotation identified 7275 genes encoding 37 glycoside hydrolases (GHs) families related to hydrolysis of cellulose, hemicellulose, oligosaccharides and other lignin-modifying enzymes. Taxonomic affiliation of genes showed high genetic potential of the phylum Acidobacteria for hemicellulose degradation, whereas Actinobacteria members appear to play an important role in celullose hydrolysis. Additionally, comparative analyses revealed greater GHs profile similarity among soils as compared to the digestive tract of animals capable of digesting plant biomass, particularly in the hemicellulases content. Combined results suggest a complex synergistic interaction of community members required for biomass degradation into fermentable sugars. This large repertoire of lignocellulolytic enzymes opens perspectives for mining potential candidates of biochemical catalysts for biofuels production from renewable resources and other environmental applications.
650 $aLignocellulose
650 $aMetagenomics
650 $aSemiarid soils
650 $aBactéria
650 $aBiocombustível
650 $aBiodegradação
650 $aCaatinga
650 $aSolo
653 $aCaatinga soils
653 $aLignocellulose degradation
700 1 $aNORONHA, M. F.
700 1 $aSOUSA, S. T. P. de
700 1 $aCABRAL, L.
700 1 $aDOMINGOS, D. F.
700 1 $aSÁBER, M. L.
700 1 $aMELO, I. S. de
700 1 $aOLIVEIRA, V. M.
773 $tFEMS Microbiology Ecology$gv. 93, n. 2, p. 1-15, 2017.
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