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 | Acesso ao texto completo restrito à biblioteca da Embrapa Meio Ambiente. Para informações adicionais entre em contato com cnpma.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Meio Ambiente. |
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Data corrente: |
08/12/2017 |
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Data da última atualização: |
09/03/2018 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
OTTONI, J. R.; CABRAL, L.; SOUSA, S. T. P. de; LACERDA JUNIOR, G. V.; DOMINGOS, D. F.; SOARES JUNIOR, F. L.; SILVA, M. C. P. da; MARCON, J.; DIAS, A. C. F.; MELO, I. S. de; SOUZA, A. P. de; ANDREOTE, F. D.; OLIVEIRA, V. M. de. |
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Afiliação: |
JULIA RONZELLA OTTONI, UNICAMP; LUCELIA CABRAL, UNICAMP; SANDERSON TARCISO PEREIRA DE SOUSA, UNICAMP; GILENO VIEIRA LACERDA JUNIOR, UNICAMP; DANIELA FERREIRA DOMINGOS, UNICAMP; FABIO LINO SOARES JUNIOR, UNICAMP; MYLENNE CALCIOLARI PINHEIRO DA SILVA, ESALQ-USP; JOELMA MARCON, ESALQ-USP; ARMANDO CAVALCANTI FRANCO DIAS, ESALQ-USP; ITAMAR SOARES DE MELO, CNPMA; ANETE PEREIRA DE SOUZA, UNICAMP; FERNANDO DINI ANDREOTE, ESALQ-USP; VALERIA MAIA DE OLIVEIRA, UNICAMP. |
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Título: |
Functional metagenomics of oil-impacted mangrove sediments reveals high abundance of hydrolases of biotechnological interest. |
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Ano de publicação: |
2017 |
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Fonte/Imprenta: |
World Journal of Microbiology and Biotechnology, v. 33, n. 7, p. 1-13, 2017. Article 141. |
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DOI: |
http://dx.doi.org/10.1007/s11274-017-2307-5 |
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Idioma: |
Inglês |
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Conteúdo: |
Mangroves are located in coastal wetlands and are susceptible to the consequences of oil spills, what may threaten the diversity of microorganisms responsible for the nutrient cycling and the consequent ecosystem functioning. Previous reports show that high concentration of oil favors the incidence of epoxide hydrolases and haloalkane dehal- ogenases in mangroves. This finding has guided the goals of this study in an attempt to broaden the analysis to other hydrolases and thereby verify whether oil contamination interferes with the prevalence of particular hydrolases and their assigned microorganisms. For this, an in-depth survey of the taxonomic and functional microbial diversity recov- ered in a fosmid library (Library_Oil Mgv) constructed from oil-impacted Brazilian mangrove sediment was car- ried out. Fosmid DNA of the whole library was extracted and submitted to Illumina HiSeq sequencing. The resulting Library Oil_Mgv dataset was further compared with those obtained by direct sequencing of environmental DNA from Brazilian mangroves (from distinct regions and affected by distinct sources of contamination), focusing on hydro- lases with potential use in biotechnological processes. The most abundant hydrolases found were proteases, esterases and amylases, with similar occurrence profile in all data- sets. The main microbial groups harboring such hydrolase- encoding genes were distinct in each mangrove, and in the fosmid library these enzymes were mainly assigned to Chloroflexaceae (for amylases), Planctomycetaceae (for esterases) and Bradyrhizobiaceae (for proteases). Assem- bly and analysis of Library_Oil Mgv reads revealed three potentially novel enzymes, one epoxide hydrolase, one xylanase and one amylase, to be further investigated via heterologous expression assays. MenosMangroves are located in coastal wetlands and are susceptible to the consequences of oil spills, what may threaten the diversity of microorganisms responsible for the nutrient cycling and the consequent ecosystem functioning. Previous reports show that high concentration of oil favors the incidence of epoxide hydrolases and haloalkane dehal- ogenases in mangroves. This finding has guided the goals of this study in an attempt to broaden the analysis to other hydrolases and thereby verify whether oil contamination interferes with the prevalence of particular hydrolases and their assigned microorganisms. For this, an in-depth survey of the taxonomic and functional microbial diversity recov- ered in a fosmid library (Library_Oil Mgv) constructed from oil-impacted Brazilian mangrove sediment was car- ried out. Fosmid DNA of the whole library was extracted and submitted to Illumina HiSeq sequencing. The resulting Library Oil_Mgv dataset was further compared with those obtained by direct sequencing of environmental DNA from Brazilian mangroves (from distinct regions and affected by distinct sources of contamination), focusing on hydro- lases with potential use in biotechnological processes. The most abundant hydrolases found were proteases, esterases and amylases, with similar occurrence profile in all data- sets. The main microbial groups harboring such hydrolase- encoding genes were distinct in each mangrove, and in the fosmid library these enzymes were mainly assigned to Chlorof... Mostrar Tudo |
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Palavras-Chave: |
Bioprospecting; Fosmid library; Mangrove. |
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Thesagro: |
Hidrolase; Mangue; Microrganismo; Petróleo; Poluição da água. |
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Thesaurus Nal: |
Hydrolases. |
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Categoria do assunto: |
S Ciências Biológicas |
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Marc: |
LEADER 02976naa a2200385 a 4500
001 2081939
005 2018-03-09
008 2017 bl uuuu u00u1 u #d
024 7 $ahttp://dx.doi.org/10.1007/s11274-017-2307-5$2DOI
100 1 $aOTTONI, J. R.
245 $aFunctional metagenomics of oil-impacted mangrove sediments reveals high abundance of hydrolases of biotechnological interest.$h[electronic resource]
260 $c2017
520 $aMangroves are located in coastal wetlands and are susceptible to the consequences of oil spills, what may threaten the diversity of microorganisms responsible for the nutrient cycling and the consequent ecosystem functioning. Previous reports show that high concentration of oil favors the incidence of epoxide hydrolases and haloalkane dehal- ogenases in mangroves. This finding has guided the goals of this study in an attempt to broaden the analysis to other hydrolases and thereby verify whether oil contamination interferes with the prevalence of particular hydrolases and their assigned microorganisms. For this, an in-depth survey of the taxonomic and functional microbial diversity recov- ered in a fosmid library (Library_Oil Mgv) constructed from oil-impacted Brazilian mangrove sediment was car- ried out. Fosmid DNA of the whole library was extracted and submitted to Illumina HiSeq sequencing. The resulting Library Oil_Mgv dataset was further compared with those obtained by direct sequencing of environmental DNA from Brazilian mangroves (from distinct regions and affected by distinct sources of contamination), focusing on hydro- lases with potential use in biotechnological processes. The most abundant hydrolases found were proteases, esterases and amylases, with similar occurrence profile in all data- sets. The main microbial groups harboring such hydrolase- encoding genes were distinct in each mangrove, and in the fosmid library these enzymes were mainly assigned to Chloroflexaceae (for amylases), Planctomycetaceae (for esterases) and Bradyrhizobiaceae (for proteases). Assem- bly and analysis of Library_Oil Mgv reads revealed three potentially novel enzymes, one epoxide hydrolase, one xylanase and one amylase, to be further investigated via heterologous expression assays.
650 $aHydrolases
650 $aHidrolase
650 $aMangue
650 $aMicrorganismo
650 $aPetróleo
650 $aPoluição da água
653 $aBioprospecting
653 $aFosmid library
653 $aMangrove
700 1 $aCABRAL, L.
700 1 $aSOUSA, S. T. P. de
700 1 $aLACERDA JUNIOR, G. V.
700 1 $aDOMINGOS, D. F.
700 1 $aSOARES JUNIOR, F. L.
700 1 $aSILVA, M. C. P. da
700 1 $aMARCON, J.
700 1 $aDIAS, A. C. F.
700 1 $aMELO, I. S. de
700 1 $aSOUZA, A. P. de
700 1 $aANDREOTE, F. D.
700 1 $aOLIVEIRA, V. M. de
773 $tWorld Journal of Microbiology and Biotechnology$gv. 33, n. 7, p. 1-13, 2017. Article 141.
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Registro original: |
Embrapa Meio Ambiente (CNPMA) |
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| Registros recuperados : 7 | |
| 1. |  | FERREIRA, E. A. B.; MEIRELLES, M. L.; FRANCO, A. C.; SANTOS, J. L. M. dos. Influência de variações ambientais sobre o fluxo de CO2 em solos sob campo limpo úmido no Cerrado. In: SIMPÓSIO NACIONAL CERRADO, 9.; SIMPÓSIO INTERNACIONAL SAVANAS TROPICAIS, 2., 2008, Brasília, DF. Desafios e estratégias para o equilíbrio entre sociedade, agronegócio e recursos naturais: anais... Planaltina, DF: Embrapa Cerrados, 2008. 7 p.| Tipo: Artigo em Anais de Congresso / Nota Técnica |
| Biblioteca(s): Embrapa Cerrados. |
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| 2. | | SANTOS, J. L. M. dos; PIRES, J. L. F.; STRIEDER, M. L.; MELLO, L. G. de; BRISTOT, M. Rendimento de grãos de sistemas de sucessão trigo-soja. In: MOSTRA DE INICIAÇÃO CIENTÍFICA, 10., MOSTRA DE PÓS-GRADUAÇÃO DA EMBRAPA TRIGO, 7., 2015, Passo Fundo. Resumos... Brasília, DF: Embrapa, 2015. Graduação. p. 36.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Trigo. |
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| 3. | | MATE, R.; DALMAGO, G. A.; PIRES, J. L. F.; CUNHA, G. R. da; STRIEDER, M. L.; SANTOS, M. A. dos; SANTOS, J. L. M. dos; MELLO, L. G. Correlações entre variáveis ambientais e rendimento de grãos de trigo e soja em sistemas de sucessão. In: MOSTRA DE INICIAÇÃO CIENTÍFICA, 10., MOSTRA DE PÓS-GRADUAÇÃO DA EMBRAPA TRIGO, 7., 2015, Passo Fundo. Resumos... Brasília, DF: Embrapa, 2015. Graduação PIBIC. p. 13.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Trigo. |
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| 4. | | ROSSATTO, A. da C.; CUNHA, V. dos S.; SANTOS, J. L. M. dos; FIPKE, G. M.; WINCK, E.; MÜLLER, T.; STECCA, J.; DURLO, L.; HELDWEIN, A. B.; PIRES, J. L. F.; MARTIN, T. N. Produtividade de soja em diferentes espaçamentos entre fileiras. In: REUNIÃO DE PESQUISA DE SOJA DA REGIÃO SUL, 41., Passo Fundo, 2016. Atas e Resumos. Passo Fundo: Universidade de Passo Fundo, 2016. p. 179-185.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Trigo. |
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| 5. | | MELLO, L. G. de; STRIEDER, M. L.; PIRES, J. L. F.; DALMAGO, G. A.; VARGAS, L.; BRISTOT, M.; SANTOS, J. L. M. dos; VON MÜHLEN, L. E.; DAUERNHEIMER, R. Potencial produtivo de cultivares de soja em função de épocas de semeadura. In: MOSTRA DE INICIAÇÃO CIENTÍFICA, 10., MOSTRA DE PÓS-GRADUAÇÃO DA EMBRAPA TRIGO, 7., 2015, Passo Fundo. Resumos... Brasília, DF: Embrapa, 2015. Graduação. p. 34.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Trigo. |
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| 6. | | STRIEDER, M. L.; PIRES, J. L. F.; COSTAMILAN, L. M.; FAGANELLO, A.; VARGAS, L.; BERTAGNOLLI, P. F.; DAUERNHEIMER, R.; MELLO, L. G.; DRUM, M. A.; VON MÜHLEN, L. E.; SANTOS, J. L. M. dos. Rendimento de grãos de soja em diferentes espaçamentos entre linhas, na safra 2014/15. In COSTAMILAN, L. M.; CARRÃO-PANIZZI, M. C. (Ed.). Soja: resultados de pesquisa 2014/2015. Passo Fundo: Embrapa Trigo, 2015. p. 19-24. (Embrapa Trigo. Documentos online, 155).| Tipo: Capítulo em Livro Técnico-Científico |
| Biblioteca(s): Embrapa Trigo. |
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| 7. | | PIRES, J. L. F.; STRIEDER, M. L.; CAIERÃO, E.; DE MORI, C.; CUNHA, G. R. da; SANTOS, H. P. dos; DALMAGO, G. A.; MARSARO JÚNIOR, A. L.; PEREIRA, P. R. V. da S.; COSTAMILAN, L. M.; SILVA JUNIOR, J. P. da; FAE, G. S.; MELLO, L. G. de; BRISTOT, M.; STECCA, J.; SANTOS, J. L. M. dos. Avaliação de sistemas de sucessão trigo-soja em Passo Fundo/RS. In: REUNIÃO DA COMISSÃO BRASILEIRA DE PESQUISA DE TRIGO E TRITICALE, 8.; SEMINÁRIO TÉCNICO DO TRIGO, 9., 2014, Canela; REUNIÃO DA COMISSÃO BRASILEIRA DE PESQUISA DE TRIGO E TRITICALE, 9.; SEMINÁRIO TÉCNICO DO TRIGO, 10., 2015, Passo Fundo. Anais... Passo Fundo: Biotrigo Genética: Embrapa Trigo, 2015. 2015 - Ecologia, Fisiologia e Práticas Culturais - Trabalho 155. 1 CD-ROM.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Trigo. |
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| Registros recuperados : 7 | |
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