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Registro Completo |
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Biblioteca(s): |
Embrapa Gado de Leite. |
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Data corrente: |
18/12/2018 |
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Data da última atualização: |
24/01/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
ZANELLA, R.; LAGO, L. V.; SILVA, A. N. da; PÉRTILLE, F.; CARVALHO, N. S. de; PANETTO, J. C. do C.; ZANELLA, G. C.; FACIOLI, F. L.; SILVA, M. V. G. B. |
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Afiliação: |
RICARDO ZANELLA, Universidade de Passo Fundo; LUÍSA V. LAGO, Universidade de Passo Fundo; ARTHUR N. DA SILVA, Universidade de Passo Fundo; FÁBIO PÉRTILLE, ESALQ/USP; NATHÃ S. de CARVALHO, UFRGS; JOAO CLAUDIO DO CARMO PANETTO, CNPGL; GIOVANA C. ZANELLA, Universidade de Passo Fundo; FERNANDA L. FACIOLI, Universidade de Passo Fundo; MARCOS VINICIUS GUALBERTO B SILVA, CNPGL. |
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Título: |
Genetic characterization of Indubrasil cattle breed population. |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
Veterinary Sciences, v. 5, n. 4, 2018. |
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Páginas: |
10 p. |
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DOI: |
10.3390/vetsci5040098 |
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Idioma: |
Inglês |
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Conteúdo: |
Abstract The Indubrasil breed was developed in the Brazilian region called Triângulo Mineiro as a result of a cross between zebu cattle. Initially, it was used as a terminal cross and currently it represents approximately 4.45% of all the Brazilian zebu cattle. Studies were conducted to estimate genetic parameters in the Indubrasil using pedigree information, however, until now, no study has been developed using large-scale genomic markers in this breed. Pedigree information are widely used to investigate population parameters; however, they can neglect some estimates when compared to the use of genomic markers. Therefore, the objective of this study was to investigate the population structure and the genetic diversity of Indubrasil cattle using a high-density Single Nucleotide Polymorphism (SNP) panel (Illumina BovineHD BeadChip 700k). Levels of genomic homozygosity were evaluated using three different approaches: Runs of homozygosity (FROH), % of homozygosis (FSNP), and inbreeding coefficient (Fx). Further, Runs of Homozygosity (ROH) segments conserved among the animals were investigated to identify possible regions associated with the breed characteristics. Our results indicate that even the Indubrasil breed having a small effective population size, the levels of homozygosity (FROH = 0.046) are still small. This was possibly caused by the cross conducted among different breeds for its development. It suggests no immediate risks associated with loss of genetic variation. This information might be used in breeding programs, for the breed conservation and for the expansion of the Indubrasil breed. MenosAbstract The Indubrasil breed was developed in the Brazilian region called Triângulo Mineiro as a result of a cross between zebu cattle. Initially, it was used as a terminal cross and currently it represents approximately 4.45% of all the Brazilian zebu cattle. Studies were conducted to estimate genetic parameters in the Indubrasil using pedigree information, however, until now, no study has been developed using large-scale genomic markers in this breed. Pedigree information are widely used to investigate population parameters; however, they can neglect some estimates when compared to the use of genomic markers. Therefore, the objective of this study was to investigate the population structure and the genetic diversity of Indubrasil cattle using a high-density Single Nucleotide Polymorphism (SNP) panel (Illumina BovineHD BeadChip 700k). Levels of genomic homozygosity were evaluated using three different approaches: Runs of homozygosity (FROH), % of homozygosis (FSNP), and inbreeding coefficient (Fx). Further, Runs of Homozygosity (ROH) segments conserved among the animals were investigated to identify possible regions associated with the breed characteristics. Our results indicate that even the Indubrasil breed having a small effective population size, the levels of homozygosity (FROH = 0.046) are still small. This was possibly caused by the cross conducted among different breeds for its development. It suggests no immediate risks associated with loss of genetic variation. T... Mostrar Tudo |
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Palavras-Chave: |
Genetic diversity; Indubrasil; SNPs. |
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Thesaurus Nal: |
Inbreeding; Pedigree. |
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Categoria do assunto: |
L Ciência Animal e Produtos de Origem Animal |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/188795/1/Artigo-VetSciences-Panetto-Genetic.pdf
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Marc: |
LEADER 02429naa a2200301 a 4500
001 2101944
005 2023-01-24
008 2018 bl uuuu u00u1 u #d
024 7 $a10.3390/vetsci5040098$2DOI
100 1 $aZANELLA, R.
245 $aGenetic characterization of Indubrasil cattle breed population.$h[electronic resource]
260 $c2018
300 $a10 p.
520 $aAbstract The Indubrasil breed was developed in the Brazilian region called Triângulo Mineiro as a result of a cross between zebu cattle. Initially, it was used as a terminal cross and currently it represents approximately 4.45% of all the Brazilian zebu cattle. Studies were conducted to estimate genetic parameters in the Indubrasil using pedigree information, however, until now, no study has been developed using large-scale genomic markers in this breed. Pedigree information are widely used to investigate population parameters; however, they can neglect some estimates when compared to the use of genomic markers. Therefore, the objective of this study was to investigate the population structure and the genetic diversity of Indubrasil cattle using a high-density Single Nucleotide Polymorphism (SNP) panel (Illumina BovineHD BeadChip 700k). Levels of genomic homozygosity were evaluated using three different approaches: Runs of homozygosity (FROH), % of homozygosis (FSNP), and inbreeding coefficient (Fx). Further, Runs of Homozygosity (ROH) segments conserved among the animals were investigated to identify possible regions associated with the breed characteristics. Our results indicate that even the Indubrasil breed having a small effective population size, the levels of homozygosity (FROH = 0.046) are still small. This was possibly caused by the cross conducted among different breeds for its development. It suggests no immediate risks associated with loss of genetic variation. This information might be used in breeding programs, for the breed conservation and for the expansion of the Indubrasil breed.
650 $aInbreeding
650 $aPedigree
653 $aGenetic diversity
653 $aIndubrasil
653 $aSNPs
700 1 $aLAGO, L. V.
700 1 $aSILVA, A. N. da
700 1 $aPÉRTILLE, F.
700 1 $aCARVALHO, N. S. de
700 1 $aPANETTO, J. C. do C.
700 1 $aZANELLA, G. C.
700 1 $aFACIOLI, F. L.
700 1 $aSILVA, M. V. G. B.
773 $tVeterinary Sciences$gv. 5, n. 4, 2018.
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Registro original: |
Embrapa Gado de Leite (CNPGL) |
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 | Acesso ao texto completo restrito à biblioteca da Embrapa Unidades Centrais. Para informações adicionais entre em contato com biblioteca@embrapa.br. |
Registro Completo
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Biblioteca(s): |
Embrapa Unidades Centrais. |
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Data corrente: |
10/01/2022 |
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Data da última atualização: |
10/01/2022 |
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Tipo da produção científica: |
Capítulo em Livro Técnico-Científico |
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Autoria: |
KARIA, C. T.; ANDRADE, R. P. de; FERNANDES, C. D.; SCHUNKE, R. M.; CARVALHO, M. A.; BRAGA, G. J. |
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Afiliação: |
CLAUDIO TAKAO KARIA, CPAC; RONALDO PEREIRA DE ANDRADE, DEIT; CELSO DORNELAS FERNANDES, CNPGC; ROZA MARIA SCHUNKE; MARCELO AYRES CARVALHO, CPAC; GUSTAVO JOSE BRAGA, CPAC. |
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Título: |
Gênero Stylosanthes. |
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Ano de publicação: |
2022 |
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Fonte/Imprenta: |
In: FONSECA, D. M. da; MARTUSCELLO, J. A. (ed.). Plantas forrageiras. 2. ed. rev. ampl. Viçosa, MG: Editora UFV, 2022. Cap. 12. |
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Idioma: |
Português |
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Thesagro: |
Brachiaria; Estilosante; Forragem; Planta Forrageira; Stylosanthes Guianensis. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 00668naa a2200229 a 4500
001 2138907
005 2022-01-10
008 2022 bl uuuu u00u1 u #d
100 1 $aKARIA, C. T.
245 $aGênero Stylosanthes.
260 $c2022
650 $aBrachiaria
650 $aEstilosante
650 $aForragem
650 $aPlanta Forrageira
650 $aStylosanthes Guianensis
700 1 $aANDRADE, R. P. de
700 1 $aFERNANDES, C. D.
700 1 $aSCHUNKE, R. M.
700 1 $aCARVALHO, M. A.
700 1 $aBRAGA, G. J.
773 $tIn: FONSECA, D. M. da; MARTUSCELLO, J. A. (ed.). Plantas forrageiras. 2. ed. rev. ampl. Viçosa, MG: Editora UFV, 2022. Cap. 12.
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