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 | Acesso ao texto completo restrito à biblioteca da Embrapa Suínos e Aves. Para informações adicionais entre em contato com cnpsa.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Suínos e Aves. |
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Data corrente: |
03/11/2020 |
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Data da última atualização: |
03/11/2020 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
ROMANO, G. de S.; IBELLI, A. M. G.; LORENZETTI, W. R.; WEBER, T.; PEIXOTO, J. de O.; CANTAO, M. E.; MORES, M. A. Z.; MORÉS, N.; PEDROSA, V. B.; COUTINHO. L. L.; LEDUR, M. C. |
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Afiliação: |
GABRIELI DE SOUZA ROMANO, UFBA; ADRIANA MERCIA GUARATINI IBELLI, CNPSA; WILLIAN RAPHAEL LORENZETTI, UNICENTRO; TOMÁS WEBER, BRF; JANE DE OLIVEIRA PEIXOTO, CNPSA; MAURICIO EGIDIO CANTAO, CNPSA; MARCOS ANTONIO ZANELLA MORES, CNPSA; NELSON MORÉS, CNPSA; VICTOR BRENO PEDROSA, UEPG; LUIZ LEHMANN COUTINHO, ESALQ; MONICA CORREA LEDUR, CNPSA. |
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Título: |
Inguinal ring RNA sequencing reveals downregulation of muscular genes related to scrotal hernia in pigs. |
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Ano de publicação: |
2020 |
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Fonte/Imprenta: |
Genes, v. 11, n. 117, 2020. |
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DOI: |
https://doi.org/10.3390/genes11020117 |
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Idioma: |
Inglês |
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Conteúdo: |
Abstract: Scrotal hernias (SH) are common congenital defects in commercial pigs, characterized by the presence of abdominal contents in the scrotal sac, leading to considerable production and animal welfare losses. Since the etiology of SH remains obscure, we aimed to identify the biological and genetic mechanisms involved in its occurrence through the whole transcriptome analysis of SH affected and unaffected pigs? inguinal rings. From the 22,452 genes annotated in the pig reference genome, 13,498 were expressed in the inguinal canal tissue. Of those, 703 genes were differentially expressed (DE, FDR < 0.05) between the two groups analyzed being, respectively, 209 genes upregulated and 494 downregulated in the SH-affected group. Thirty-seven significantly overrepresented GO terms related to SH were enriched, and the most relevant biological processes were muscular system, cell differentiation, sarcome reorganization, and myofibril assembly. The calcium signaling, hypertrophic cardiomyopathy, dilated cardiomyopathy, and cardiac muscle contraction were the major pathways possibly involved in the occurrence of the scrotal hernias. The expression profile of the DE genes was associated with the reduction of smooth muscle dierentiation, followed by low calcium content in the cell, which could lead to a decreased apoptosis ratio and diminished muscle contraction of the inguinal canal region. We have demonstrated that genes involved with musculature are closely linked to the physiological imbalance predisposing to scrotal hernia. According to our study, the genes MYBPC1, BOK, SLC25A4, SLC8A3, DES, TPM2, MAP1CL3C, and FGF1 were considered strong candidates for future evaluation. MenosAbstract: Scrotal hernias (SH) are common congenital defects in commercial pigs, characterized by the presence of abdominal contents in the scrotal sac, leading to considerable production and animal welfare losses. Since the etiology of SH remains obscure, we aimed to identify the biological and genetic mechanisms involved in its occurrence through the whole transcriptome analysis of SH affected and unaffected pigs? inguinal rings. From the 22,452 genes annotated in the pig reference genome, 13,498 were expressed in the inguinal canal tissue. Of those, 703 genes were differentially expressed (DE, FDR < 0.05) between the two groups analyzed being, respectively, 209 genes upregulated and 494 downregulated in the SH-affected group. Thirty-seven significantly overrepresented GO terms related to SH were enriched, and the most relevant biological processes were muscular system, cell differentiation, sarcome reorganization, and myofibril assembly. The calcium signaling, hypertrophic cardiomyopathy, dilated cardiomyopathy, and cardiac muscle contraction were the major pathways possibly involved in the occurrence of the scrotal hernias. The expression profile of the DE genes was associated with the reduction of smooth muscle dierentiation, followed by low calcium content in the cell, which could lead to a decreased apoptosis ratio and diminished muscle contraction of the inguinal canal region. We have demonstrated that genes involved with musculature are closely linked to the physiol... Mostrar Tudo |
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Palavras-Chave: |
Congenital disease; Differentially expressed genes; Doença congênita; Genes expressos diferencialmente; Hérnia escrotal; Sequenciamento do RNA; Transcriptoma. |
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Thesagro: |
Genética Animal; Porco; Suíno. |
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Thesaurus Nal: |
Animal genetics; Swine; Swine diseases; Transcriptome. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 02908naa a2200421 a 4500
001 2126201
005 2020-11-03
008 2020 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.3390/genes11020117$2DOI
100 1 $aROMANO, G. de S.
245 $aInguinal ring RNA sequencing reveals downregulation of muscular genes related to scrotal hernia in pigs.$h[electronic resource]
260 $c2020
520 $aAbstract: Scrotal hernias (SH) are common congenital defects in commercial pigs, characterized by the presence of abdominal contents in the scrotal sac, leading to considerable production and animal welfare losses. Since the etiology of SH remains obscure, we aimed to identify the biological and genetic mechanisms involved in its occurrence through the whole transcriptome analysis of SH affected and unaffected pigs? inguinal rings. From the 22,452 genes annotated in the pig reference genome, 13,498 were expressed in the inguinal canal tissue. Of those, 703 genes were differentially expressed (DE, FDR < 0.05) between the two groups analyzed being, respectively, 209 genes upregulated and 494 downregulated in the SH-affected group. Thirty-seven significantly overrepresented GO terms related to SH were enriched, and the most relevant biological processes were muscular system, cell differentiation, sarcome reorganization, and myofibril assembly. The calcium signaling, hypertrophic cardiomyopathy, dilated cardiomyopathy, and cardiac muscle contraction were the major pathways possibly involved in the occurrence of the scrotal hernias. The expression profile of the DE genes was associated with the reduction of smooth muscle dierentiation, followed by low calcium content in the cell, which could lead to a decreased apoptosis ratio and diminished muscle contraction of the inguinal canal region. We have demonstrated that genes involved with musculature are closely linked to the physiological imbalance predisposing to scrotal hernia. According to our study, the genes MYBPC1, BOK, SLC25A4, SLC8A3, DES, TPM2, MAP1CL3C, and FGF1 were considered strong candidates for future evaluation.
650 $aAnimal genetics
650 $aSwine
650 $aSwine diseases
650 $aTranscriptome
650 $aGenética Animal
650 $aPorco
650 $aSuíno
653 $aCongenital disease
653 $aDifferentially expressed genes
653 $aDoença congênita
653 $aGenes expressos diferencialmente
653 $aHérnia escrotal
653 $aSequenciamento do RNA
653 $aTranscriptoma
700 1 $aIBELLI, A. M. G.
700 1 $aLORENZETTI, W. R.
700 1 $aWEBER, T.
700 1 $aPEIXOTO, J. de O.
700 1 $aCANTAO, M. E.
700 1 $aMORES, M. A. Z.
700 1 $aMORÉS, N.
700 1 $aPEDROSA, V. B.
700 1 $aCOUTINHO. L. L.
700 1 $aLEDUR, M. C.
773 $tGenes$gv. 11, n. 117, 2020.
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Embrapa Suínos e Aves (CNPSA) |
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| Registros recuperados : 11 | |
| 1. |  | GIRALDI, T. R.; MENDONÇA, V. R.; FONSECA, G. V.; RIBEIRO, C.; WEBER, T. Influence of surface effects and crystallinity of ZnO nanoparticles in photocatalysis In: INTERNATIONAL CONFERENCE ON FOOD AND AGRICULTURE APPLICATIONS OF NANOTECHNOLOGIES - NanoAgri, 2010, São Pedro, SP. [Anais…] São Pedro: Aptor Software, 2010. Editors: Caue Ribeiro, Odílio Benedito Garrido de Assis, Luiz Henrique Capparelli Mattoso, Sérgio Mascarenhas.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Instrumentação. |
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| 2. | | ARAÚJO, R. O. de; MARCONDES, C. R.; WEBER, T.; EVERLING, D. M.; VOZZI, P. A.; RORATO, P. R. N. Abordagem bayesiana para associações genéticas entre indicadores de produtividade para fêmeas nelore. In: ZOOTEC NA AMAZÔNIA LEGAL, 1.; CONGRESSO BRASILEIRO DE ZOOTECNIA, 20., 2010, Palmas. Sustentabilidade e produção animal. Palmas: UFT: ABZ, [2010]. Zootec 2010.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 3. | | ARAÚJO, R. O. de; MARCONDES, C. R.; WEBER, T.; EVERLING, D. M.; VOZZI, P. A.; RORATO, P. R. N. Estimação de parâmetros genéticos sob enfoque bayesiano para indicadores de produtividade na raça Nelore. In: ZOOTEC NA AMAZÔNIA LEGAL, 1.; CONGRESSO BRASILEIRO DE ZOOTECNIA, 20., 2010, Palmas. Sustentabilidade e produção animal. Palmas: UFT: ABZ, [2010]. Zootec 2010.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 4. | | RORATO, P. R. N.; ARAÚJO, R. O. de; MARCONDES, C. R.; EVERLING, D. M.; BRESOLIN, T.; WEBER, T. Tendências genéticas e fenotípicas para características produtivas e reprodutivas para fêmeas da raça Nelore. In: SIMPÓSIO BRASILEIRO DE MELHORAMENTO ANIMAL, 9., 2012, João Pessoa. Anais... João Pessoa. SBMA, 2012.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 5. | | ARAÚJO, R. O. de; MARCONDES, C. R.; EVERLING, D. M.; WEBER, T.; LOPES, J. S.; GARNERO, A. del V.; GUNSKI, R. J.; RORATO, P. R. Abordagem bayesiana multivariada para características de crescimento, fertilidade e escores visuais de rebanhos da raça Brangus. Pesquisa Agropecuária Brasileira, v. 47, n. 8, p. 1077-1086, ago. 2012.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 6. | | ARAÚJO, R. O. de; MARCONDES, C. R.; EVERLING, D. M.; WEBER, T.; LOPES, J. S.; GARNERO, A. del V.; GUNSKI, R. J.; RORATO, P. R. N. Abordagem bayesiana multivariada para características de crescimento, fertilidade e escores visuais de rebanhos da raça Brangus Pesquisa Agropecuária Brasileira, Brasília, DF, v. 47, n. 8, p. 1077-1086, ago. 2012 P. 1077-1086 Título em inglês: Bayesian multivariate approach for growth, fertility and visual score traits of Brangus cattle herds.| Biblioteca(s): Embrapa Unidades Centrais. |
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| 7. | | EVERLING, D. M.; RORATO, P. R. N.; ARAUJO, R. O de; BOLIGON, A. A.; BRESOLIN, T.; DORNELLES, M. de A.; WEBER, T.; PACHECO, P. S.; CAMPOS, L. T. Associação genética de escores de conformação com características de crescimento em bovinos da raça Angus. Pesquisa Agropecuária Brasileira, Brasília, DF, v. 47, n. 10, p. 1524-1532, out. 2012. Título em inglês: Genetic association of conformation scores with growth traits in Angus breed cattle.| Biblioteca(s): Embrapa Unidades Centrais. |
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| 8. | | FREITAS, M. S. de; FREITAS, L. S.; WEBER, T.; YAMAKI, M; CANTAO, M. E.; PEIXOTO, J. de O.; LEDUR, M. C. Comparison of iterated single-step and Bayesian regressions on genomic evaluations for age at 100 kg in swine. Journal of Animal Science, v. 93, n. 10, p. 4675-4683, 2015.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Suínos e Aves. |
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| 9. | | ROMANO, G. de S.; IBELLI, A. M. G.; LORENZETTI, W. R.; WEBER, T.; PEIXOTO, J. de O.; CANTAO, M. E.; MORES, M. A. Z.; MORÉS, N.; PEDROSA, V. B.; COUTINHO. L. L.; LEDUR, M. C. Inguinal ring RNA sequencing reveals downregulation of muscular genes related to scrotal hernia in pigs. Genes, v. 11, n. 117, 2020.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Suínos e Aves. |
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| 10. | | ROMANO, G. de S.; IBELLI, A. M. G.; PEIXOTO, J. de O.; CANTAO, M. E.; WEBER, T.; MORES, M. A. Z.; MORES, N.; PEDROSA, V. B.; PINTO, L. F. B.; COUTINHO, L. L.; LEDUR, M. C. Genes diferencialmente expressos no transcriptoma de suínos normais e afetados com hérnia escrotal. In: SIMPÓSIO BRASILEIRO DE MELHORAMENTO ANIMAL, 12., 2017, Ribeirão Preto. Anais... Ribeirão Preto: SBMA, 2017. 1 CD-ROM.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Suínos e Aves. |
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| 11. | | ROMANO, G. de S.; IBELLI, A. M. G.; PEIXOTO, J. de O.; CANTAO, M. E.; WEBER, T.; MORES, M. A. Z.; MORES, N.; PEDROSA, V. B.; COUTINHO, L. L.; LEDUR, M. C. Descobertas de variantes envolvidas na ocorrência de hérnia escrotal em suínos pela análise do exoma. In: SIMPÓSIO BRASILEIRO DE MELHORAMENTO ANIMAL, 13., 2019, Salvador. Anais... Salvador: SBMA, 2019. 1 CD-ROM.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Suínos e Aves. |
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| Registros recuperados : 11 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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