| |
|
|
|
Registro Completo |
|
Biblioteca(s): |
Embrapa Gado de Corte. |
|
Data corrente: |
27/02/2019 |
|
Data da última atualização: |
27/02/2019 |
|
Tipo da produção científica: |
Artigo em Periódico Indexado |
|
Autoria: |
FERREIRA, R. C. U.; LARA, L. A. de C.; CHIARI, L.; BARRIOS, S. C. L.; VALLE, C. B. do; VALERIO, J. R.; TORRES, F. Z. V.; GARCIA, A. A. F.; SOUZA, A. P. de. |
|
Afiliação: |
Rebecca Caroline Ulbricht Ferreira, Universidade de Campinas - Unicamp/Centro de Biologia Molecular e Engenharia Genética; Letícia Aparecida de Castro Lara, Universidade de São Paulo - USP/Escola Superior de Agricultura Luiz de Queiroz - ESALQ/Departameto de Genética; LUCIMARA CHIARI, CNPGC; SANZIO CARVALHO LIMA BARRIOS, CNPGC; CACILDA BORGES DO VALLE, CNPGC; JOSE RAUL VALERIO, CNPGC; FABRICIA ZIMERMANN VILELA TORRES, CNPGC; Antonio Augusto Franco Garcia, Universidade de São Paulo - USP/Escola Superior de Agricultura Luiz de Queiroz - ESALQ/Departameto de Genética; Anete Pereira de Souza, Universidade de Campinas - Unicamp/Centro de Biologia Molecular e Engenharia Genética. |
|
Título: |
Genetic Mapping With Allele Dosage Information in Tetraploid Urochloa decumbens (Stapf) R. D. Webster Reveals Insights Into Spittlebug (Notozulia entreriana Berg) Resistance. |
|
Ano de publicação: |
2019 |
|
Fonte/Imprenta: |
Frontiers in Plant Science, v. 10, February, 2019. |
|
Idioma: |
Inglês |
|
Conteúdo: |
Urochloa decumbens (Stapf) R. D. Webster is one of the most important African forage grasses in Brazilian beef production. Currently available genetic-genomic resources for this species are restricted mainly due to polyploidy and apomixis. Therefore, crucial genomic-molecular studies such as the construction of genetic maps and the mapping of quantitative trait loci (QTLs) are very challenging and consequently affect the advancement of molecular breeding. The objectives of this work were to (i) construct an integrated U. decumbens genetic map for a full-sibling progeny using GBS-based markers with allele dosage information, (ii) detect QTLs for spittlebug (Notozulia entreriana) resistance, and (iii) seek putative candidate genes involved in defense against biotic stresses. We used the Setaria viridis genome a reference to align GBS reads and selected 4,240 high-quality SNP markers with allele dosage information. Of these markers, 1,000 were distributed throughout nine homologous groups with a cumulative map length of 1,335.09 cM and an average marker density of 1.33 cM. We detected QTLs for resistance to spittlebug, an important pasture insect pest, that explained between 4.66 and 6.24% of the phenotypic variation. These QTLs are in regions containing putative candidate genes related to defense against biotic stresses. Because this is the first genetic map with SNP autotetraploid dosage data and QTL detection in U. decumbens, it will be useful for future evolutionary studies, genome assembly, and other QTL analyses in Urochloa spp. Moreover, the results might facilitate the isolation of spittlebug-related candidate genes and help clarify the mechanism of spittlebug resistance. These approaches will improve selection efficiency and accuracy in U. decumbens molecular breeding and shorten the breeding cycle. MenosUrochloa decumbens (Stapf) R. D. Webster is one of the most important African forage grasses in Brazilian beef production. Currently available genetic-genomic resources for this species are restricted mainly due to polyploidy and apomixis. Therefore, crucial genomic-molecular studies such as the construction of genetic maps and the mapping of quantitative trait loci (QTLs) are very challenging and consequently affect the advancement of molecular breeding. The objectives of this work were to (i) construct an integrated U. decumbens genetic map for a full-sibling progeny using GBS-based markers with allele dosage information, (ii) detect QTLs for spittlebug (Notozulia entreriana) resistance, and (iii) seek putative candidate genes involved in defense against biotic stresses. We used the Setaria viridis genome a reference to align GBS reads and selected 4,240 high-quality SNP markers with allele dosage information. Of these markers, 1,000 were distributed throughout nine homologous groups with a cumulative map length of 1,335.09 cM and an average marker density of 1.33 cM. We detected QTLs for resistance to spittlebug, an important pasture insect pest, that explained between 4.66 and 6.24% of the phenotypic variation. These QTLs are in regions containing putative candidate genes related to defense against biotic stresses. Because this is the first genetic map with SNP autotetraploid dosage data and QTL detection in U. decumbens, it will be useful for future evolutionary studies... Mostrar Tudo |
|
Palavras-Chave: |
Allele dosage; Linkage map; Signalgrass; SNP. |
|
Thesagro: |
Brachiaria. |
|
Thesaurus Nal: |
Polyploidy; Quantitative traits. |
|
Categoria do assunto: |
-- |
|
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/193444/1/Genetic-mapping-with-alele-dosage-information.pdf
|
|
Marc: |
LEADER 02764naa a2200301 a 4500
001 2106558
005 2019-02-27
008 2019 bl uuuu u00u1 u #d
100 1 $aFERREIRA, R. C. U.
245 $aGenetic Mapping With Allele Dosage Information in Tetraploid Urochloa decumbens (Stapf) R. D. Webster Reveals Insights Into Spittlebug (Notozulia entreriana Berg) Resistance.$h[electronic resource]
260 $c2019
520 $aUrochloa decumbens (Stapf) R. D. Webster is one of the most important African forage grasses in Brazilian beef production. Currently available genetic-genomic resources for this species are restricted mainly due to polyploidy and apomixis. Therefore, crucial genomic-molecular studies such as the construction of genetic maps and the mapping of quantitative trait loci (QTLs) are very challenging and consequently affect the advancement of molecular breeding. The objectives of this work were to (i) construct an integrated U. decumbens genetic map for a full-sibling progeny using GBS-based markers with allele dosage information, (ii) detect QTLs for spittlebug (Notozulia entreriana) resistance, and (iii) seek putative candidate genes involved in defense against biotic stresses. We used the Setaria viridis genome a reference to align GBS reads and selected 4,240 high-quality SNP markers with allele dosage information. Of these markers, 1,000 were distributed throughout nine homologous groups with a cumulative map length of 1,335.09 cM and an average marker density of 1.33 cM. We detected QTLs for resistance to spittlebug, an important pasture insect pest, that explained between 4.66 and 6.24% of the phenotypic variation. These QTLs are in regions containing putative candidate genes related to defense against biotic stresses. Because this is the first genetic map with SNP autotetraploid dosage data and QTL detection in U. decumbens, it will be useful for future evolutionary studies, genome assembly, and other QTL analyses in Urochloa spp. Moreover, the results might facilitate the isolation of spittlebug-related candidate genes and help clarify the mechanism of spittlebug resistance. These approaches will improve selection efficiency and accuracy in U. decumbens molecular breeding and shorten the breeding cycle.
650 $aPolyploidy
650 $aQuantitative traits
650 $aBrachiaria
653 $aAllele dosage
653 $aLinkage map
653 $aSignalgrass
653 $aSNP
700 1 $aLARA, L. A. de C.
700 1 $aCHIARI, L.
700 1 $aBARRIOS, S. C. L.
700 1 $aVALLE, C. B. do
700 1 $aVALERIO, J. R.
700 1 $aTORRES, F. Z. V.
700 1 $aGARCIA, A. A. F.
700 1 $aSOUZA, A. P. de
773 $tFrontiers in Plant Science$gv. 10, February, 2019.
Download
Esconder MarcMostrar Marc Completo |
|
Registro original: |
Embrapa Gado de Corte (CNPGC) |
|
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
URL |
Voltar
|
|
|
Registro Completo
|
Biblioteca(s): |
Embrapa Arroz e Feijão. |
|
Data corrente: |
26/03/2022 |
|
Data da última atualização: |
29/03/2022 |
|
Tipo da produção científica: |
Resumo em Anais de Congresso |
|
Autoria: |
HONÓRIO FILHO, G. R.; MATTA, D. H. da; HEINEMANN, A. B. |
|
Afiliação: |
GUTEMBERG RESENDE HONÓRIO FILHO, mestrando UFG; DAVID HENRIQUES DA MATTA, UFG; ALEXANDRE BRYAN HEINEMANN, CNPAF. |
|
Título: |
Predição do florescimento do arroz (Oryza Sativa L.) irrigado por meio de variáveis geográficas e climáticas. |
|
Ano de publicação: |
2021 |
|
Fonte/Imprenta: |
In: SEMINÁRIO JOVENS TALENTOS, 15., 2021, Santo Antônio de Goiás. Resumos... Brasília, DF: Embrapa; Santo Antônio de Goiás: Embrapa Arroz e Feijão, 2021. |
|
Páginas: |
p. 65. |
|
ISBN: |
978-65-87380-73-5 |
|
Idioma: |
Português |
|
Notas: |
Evento online. |
|
Conteúdo: |
As variáveis climáticas influenciam a fenologia do arroz (Oryza sativa L.), principalmente a fase reprodutiva. Conhecer as interações entre o florescimento e as variáveis climáticas é importante para o planejamento da rizicultura. Objetivou-se neste estudo compreender a influência das variáveis climáticas na data de florescimento nas regiões Norte e Centro-Oeste. Foram avaliados dados de florescimento acumulados nos últimos 33 anos, provenientes do Programa de Melhoramento do Arroz Irrigado da Embrapa, para 91 genótipos. |
|
Thesagro: |
Arroz Irrigado; Fenologia; Oryza Sativa; Risco Climático. |
|
Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
|
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/232991/1/sjt-p65.pdf
|
|
Marc: |
LEADER 01318nam a2200217 a 4500
001 2141356
005 2022-03-29
008 2021 bl uuuu u00u1 u #d
020 $a978-65-87380-73-5
100 1 $aHONÓRIO FILHO, G. R.
245 $aPredição do florescimento do arroz (Oryza Sativa L.) irrigado por meio de variáveis geográficas e climáticas.$h[electronic resource]
260 $aIn: SEMINÁRIO JOVENS TALENTOS, 15., 2021, Santo Antônio de Goiás. Resumos... Brasília, DF: Embrapa; Santo Antônio de Goiás: Embrapa Arroz e Feijão$c2021
300 $ap. 65.
500 $aEvento online.
520 $aAs variáveis climáticas influenciam a fenologia do arroz (Oryza sativa L.), principalmente a fase reprodutiva. Conhecer as interações entre o florescimento e as variáveis climáticas é importante para o planejamento da rizicultura. Objetivou-se neste estudo compreender a influência das variáveis climáticas na data de florescimento nas regiões Norte e Centro-Oeste. Foram avaliados dados de florescimento acumulados nos últimos 33 anos, provenientes do Programa de Melhoramento do Arroz Irrigado da Embrapa, para 91 genótipos.
650 $aArroz Irrigado
650 $aFenologia
650 $aOryza Sativa
650 $aRisco Climático
700 1 $aMATTA, D. H. da
700 1 $aHEINEMANN, A. B.
Download
Esconder MarcMostrar Marc Completo |
|
Registro original: |
Embrapa Arroz e Feijão (CNPAF) |
|
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
Fechar
|
| Nenhum registro encontrado para a expressão de busca informada. |
|
|
