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Registro Completo |
Biblioteca(s): |
Embrapa Agroenergia; Embrapa Soja. |
Data corrente: |
08/12/2022 |
Data da última atualização: |
08/12/2022 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
DUARTE, K E. D.; BASSO, M. F.; OLIVEIRA, N. G. de; SILVA, J. C. F. da; GARCIA, B. de O.; DIAS, B. B. A.; CARDOSO, T. B.; NEPOMUCENO, A. L.; KOBAYASHI, A. K.; SANTIAGO, T. R.; SOUZA, W. R. de; MOLINARI, H. B. C. |
Afiliação: |
KAROLINE ESTEFANI DUARTE, Federal University of ABC; MARCOS FERNANDO BASSO, Mato Grosso Cotton Institute; NELSON GERALDO DE OLIVEIRA, EMBRAPA AGROENERGY; JOSÉ CLEYDSON FERREIRA DA SILVA, FEDERAL UNIVERSITY OF VIÇOSA; BRUNO DE OLIVEIRA GARCIA, Federal University of Viçosa; BARBARA ANDRADE DIAS BRITO DA CUNHA, CNPAE; THIAGO BERGAMO CARDOSO, Sempre AGTECH; ALEXANDRE LIMA NEPOMUCENO, CNPSO; ADILSON KENJI KOBAYASHI, CNPAE; THAÍS RIBEIRO SANTIAGO, UNIVERSITY OF BRASÍLIA; WAGNER RODRIGO DE SOUZA, Federal University of ABC; HUGO BRUNO CORREA MOLINARI, Sempre AGTECH. |
Título: |
MicroRNAs expression profiles in early responses to different levels of water deficit in Setaria viridis. |
Ano de publicação: |
2022 |
Fonte/Imprenta: |
Physiology and Molecular Biology of Plants, v. 28, n. 8, p. 1607-1624, 2022. |
DOI: |
https://doi.org/10.1007/s12298-022-01226-z |
Idioma: |
Inglês |
Conteúdo: |
Water deficit is a major constraint for crops of economic importance in almost all agricultural regions. However, plants have an active defense system to adapt to these adverse conditions, acting in the reprogramming of gene expression responsible for encoding microRNAs (miRNAs). These miRNAs promote the regulation to the target gene expression by the post-transcriptional (PTGS) and transcriptional gene silencing (TGS), modulating several pathways including defense response to water deficit. The broader knowledge of the miRNA expression profile and its regulatory networks in response to water deficit can provide evidence for the development of new biotechnological tools for genetic improvement of several important crops. In this study, we used Setaria viridis accession A10.1 as a C4 model plant to widely investigate the miRNA expression profile in early responses to different levels of water deficit. Ecophysiological studies in Setaria viridis under water deficit and after rewatering demonstrated a drought tolerant accession, capable of a rapid recovery from the stress. Deep small RNA sequencing and degradome studies were performed in plants submitted to drought to identify differentially expressed miRNA genes and their predicted targets, using in silico analysis. Our findings showed that several miRNAs were differentially modulated in response to distinctive levels of water deficit and after rewatering. The predicted mRNA targets mainly corresponded to genes related to cell wall remodeling, antioxidant system and drought-related transcription factors, indicating that these genes are rapidly regulated in early responses to drought stress. The implications of these modulations are extensively discussed, and higher-effect miRNAs are suggested as major players for potential use in genetic engineering to improve drought tolerance in economically important crops, such as sugarcane, maize, and sorghum. MenosWater deficit is a major constraint for crops of economic importance in almost all agricultural regions. However, plants have an active defense system to adapt to these adverse conditions, acting in the reprogramming of gene expression responsible for encoding microRNAs (miRNAs). These miRNAs promote the regulation to the target gene expression by the post-transcriptional (PTGS) and transcriptional gene silencing (TGS), modulating several pathways including defense response to water deficit. The broader knowledge of the miRNA expression profile and its regulatory networks in response to water deficit can provide evidence for the development of new biotechnological tools for genetic improvement of several important crops. In this study, we used Setaria viridis accession A10.1 as a C4 model plant to widely investigate the miRNA expression profile in early responses to different levels of water deficit. Ecophysiological studies in Setaria viridis under water deficit and after rewatering demonstrated a drought tolerant accession, capable of a rapid recovery from the stress. Deep small RNA sequencing and degradome studies were performed in plants submitted to drought to identify differentially expressed miRNA genes and their predicted targets, using in silico analysis. Our findings showed that several miRNAs were differentially modulated in response to distinctive levels of water deficit and after rewatering. The predicted mRNA targets mainly corresponded to genes related to cell... Mostrar Tudo |
Thesagro: |
Bioenergia; Setária. |
Thesaurus Nal: |
Abiotic stress; Bioenergy; Drought; Setaria viridis. |
Categoria do assunto: |
-- X Pesquisa, Tecnologia e Engenharia |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1149404/1/MicroRNAs.pdf
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Marc: |
LEADER 02948naa a2200337 a 4500 001 2149404 005 2022-12-08 008 2022 bl uuuu u00u1 u #d 024 7 $ahttps://doi.org/10.1007/s12298-022-01226-z$2DOI 100 1 $aDUARTE, K E. D. 245 $aMicroRNAs expression profiles in early responses to different levels of water deficit in Setaria viridis.$h[electronic resource] 260 $c2022 520 $aWater deficit is a major constraint for crops of economic importance in almost all agricultural regions. However, plants have an active defense system to adapt to these adverse conditions, acting in the reprogramming of gene expression responsible for encoding microRNAs (miRNAs). These miRNAs promote the regulation to the target gene expression by the post-transcriptional (PTGS) and transcriptional gene silencing (TGS), modulating several pathways including defense response to water deficit. The broader knowledge of the miRNA expression profile and its regulatory networks in response to water deficit can provide evidence for the development of new biotechnological tools for genetic improvement of several important crops. In this study, we used Setaria viridis accession A10.1 as a C4 model plant to widely investigate the miRNA expression profile in early responses to different levels of water deficit. Ecophysiological studies in Setaria viridis under water deficit and after rewatering demonstrated a drought tolerant accession, capable of a rapid recovery from the stress. Deep small RNA sequencing and degradome studies were performed in plants submitted to drought to identify differentially expressed miRNA genes and their predicted targets, using in silico analysis. Our findings showed that several miRNAs were differentially modulated in response to distinctive levels of water deficit and after rewatering. The predicted mRNA targets mainly corresponded to genes related to cell wall remodeling, antioxidant system and drought-related transcription factors, indicating that these genes are rapidly regulated in early responses to drought stress. The implications of these modulations are extensively discussed, and higher-effect miRNAs are suggested as major players for potential use in genetic engineering to improve drought tolerance in economically important crops, such as sugarcane, maize, and sorghum. 650 $aAbiotic stress 650 $aBioenergy 650 $aDrought 650 $aSetaria viridis 650 $aBioenergia 650 $aSetária 700 1 $aBASSO, M. F. 700 1 $aOLIVEIRA, N. G. de 700 1 $aSILVA, J. C. F. da 700 1 $aGARCIA, B. de O. 700 1 $aDIAS, B. B. A. 700 1 $aCARDOSO, T. B. 700 1 $aNEPOMUCENO, A. L. 700 1 $aKOBAYASHI, A. K. 700 1 $aSANTIAGO, T. R. 700 1 $aSOUZA, W. R. de 700 1 $aMOLINARI, H. B. C. 773 $tPhysiology and Molecular Biology of Plants$gv. 28, n. 8, p. 1607-1624, 2022.
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Registro original: |
Embrapa Agroenergia (CNPAE) |
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Registros recuperados : 18 | |
1. | | ENCINAS, V. B.; SOUZA, W. R. de; TENENTE, R. C. V.; TENENTE, G. C. M. V. Base de dados de nematóides quarentenários para atender à agricultura brasileira. In: ENCONTRO DO TALENTO ESTUDANTIL DA EMBRAPA RECURSOS GENÉTICOS E BIOTECNOLOGIA, 6., 2001, Brasília, DF. Anais: resumos dos trabalhos. Brasília, DF: Embrapa Recursos Genéticos e Biotecnologia, 2001. p. 104.Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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2. | | MENEZES, C. B. A. de; AFONSO, R. S.; SOUZA, W. R. de; PARMA, M. M.; MELO, I. S. de; ZUCCHI, T. D.; FANTINATTI-GARBOGGINI, F. Gordonia didemni sp. nov. an actinomycete isolated from the marine ascidium Didemnum sp. Antonie van Leeuwenhoek, Gedrukt, v. 109, n. 2, p. 297-303, 2016.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
Biblioteca(s): Embrapa Meio Ambiente. |
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3. | | SANTIAGO, T. R.; DUARTE, K. E.; SOUZA, W. R. de; STEINDORFF, A. S.; FORMIGHIERI, E. F.; KOBAYASHI, A. K.; MOLINARI, H. B. C. Divergence of DNA methylation and gene expression in Setaria viridis accessions under drought stress. In: ENCONTRO DE PESQUISA E INOVAÇÃO DA EMBRAPA AGROENERGIA, 5., 2018, Brasília, DF. Anais ... Brasília, DF: Embrapa Agroenergia, 2018. p. 31.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Agroenergia. |
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4. | | MONTEIRO, L. M. R.; VOLPATO, M. M. L.; INÁCIO, F. D.; SOUZA, W. R. de; SILVA, T. H.; ALVES, H. M. R. Descrição do clima na região da Indicação Geográfica Campo das Vertentes nos anos de 2020 a 2022. In: SEMINÁRIO DE INICIAÇÃO CIENTÍFICA E TECNOLÓGICA, 18., 2023, Belo Horizonte. Anais... Belo Horizonte: EPAMIG, 2023. p. 79-78Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Café. |
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5. | | MENEZES, C. B. A. de; AFONSO, R. S.; SOUZA, W. R. de; PARMA, M. M.; MELO, I. S. de; ZUCCHI, T. D.; FANTINATTI-GARBOGGINI, F. Williamsia spongiae sp. nov., an actinomycete isolated from the marine sponge Amphimedon viridis. International Journal of Systematic and Evolutionary Microbiology, v. 67, n. 5, p. 1260-1265, 2017.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
Biblioteca(s): Embrapa Meio Ambiente. |
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6. | | MARTINS, P. K.; MAFRA, V.; SOUZA, W. R. de; RIBEIRO, A. P.; VINECKY, F.; BASSO, M. F.; DIAS, B. B. A.; KOBAYASHI, A. K.; MOLINARI, H. B. C. Selection of reliable reference genes for RT-qPCR analysis during developmental stages and abiotic stress in Setaria viridis. Scientific Reports, V. 6, 28348, 2016.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agroenergia. |
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7. | | DUARTE, K. E.; SOUZA, W. R. de; SANTIAGO, T. S.; SAMAPAIO, B. L.; RIBEIRO, A. P.; COTTA, M. G.; DIAS, B. B. A.; MARRACCINI, P. R. R.; KOBAYASHI, A. K.; MOLINARI, H. B. C. Identification and characterization of core abscisic acid (ABA) signaling components and their gene expression profile in response to abiotic stresses in Setaria viridis. Scientific Reports, v. 9, n . 4028, 2019. 16 p.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agroenergia. |
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8. | | FIDELIS, R. R.; SERAGLIO, N. A.; RAUBER, W. A.; MARQUES, K. R.; BORTOLON, L.; BORTOLON, E. S. O.; TAVARES, A. T.; ROTILI, E. A.; FREITAS, G. A. de; SOUZA, W. R. de; BARROS, H. B.; LEAL, T. H. V. L.; SOUSA, P. L. R.; BURIN, L. X. Kinetin and nitrogen in agronomic characteristics of soybean. American Scientific Research Journal for Engineering, Technology, and Sciences, v. 69, n. 1, p. 113-120, 2020.Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 5 |
Biblioteca(s): Embrapa Pesca e Aquicultura. |
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9. | | MARTINS, M. T. B.; SOUZA, W. R. de; DIAS, B. B. A.; BASSO, M. F.; OLIVEIRA, N. G. de; VINECKY, F.; MARTINS, P. K.; OLIVEIRA, P. A. de; ARENQUE-MUSA, B. C.; SOUZA, A. P. de; BUCKERIDGE, M. S.; KOBAYASHI, A. K.; QUIRINO, B. F.; MOLINARI, H. B. C. Characterization of sugarcane (Saccharum spp.) leaf senescence: implications for biofuel production. Biotechnology for Biofuels, v. 9, n. 153, 2016.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agroenergia. |
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10. | | RIBEIRO, A. P.; VINECKY, F.; DUARTE, K. E.; SANTIAGO, T. R.; CASARI, R. A. das C. N.; HELL, A. F.; DIAS, B. B. A.; MARTINS, P. K.; CENTENO, D. da C.; OLIVEIRA, P. A. de; CANÇADO, G. M. de A.; MAGALHAES, J. V. de; KOBAYASHI, A. K.; SOUZA, W. R. de; MOLINARI, H. B. C. Enhanced aluminum tolerance in sugarcane: evaluation of SbMATE overexpression and genome-wide identification of ALMTs in Saccharum spp. BMC Plant Biology, v. 21, p. 1-15, 2021. Article number: 300.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agricultura Digital; Embrapa Agroenergia; Embrapa Milho e Sorgo. |
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11. | | SOUZA, W. R. de; OLIVEIRA, N. G. de; VINECKY, F.; RIBEIRO, A. P.; BASSO, M. F.; CASARI, R. A. das C. N.; DIAS, B. B. A.; NEPOMUCENO, A. L.; KOBAYASHI, A. K.; NAKASHIMA, K.; YAMAGUCHI-SHINOZAKI, K.; MOLINARI, H. B. C. Development of drought-tolerant sugarcane overexpressing the AtDREB2A CA gene. In: NAKASHIMA, K.; URAO, Takeshi. (Ed.). Development of biotechnologies and biotech crops for stable food production under adverse environments and changing climate conditions. Tsukuba: JIRCAS, 2020. ch. 3-3. p. 89-98 (JIRCAS Working Report, 91).Tipo: Capítulo em Livro Técnico-Científico |
Biblioteca(s): Embrapa Agroenergia. |
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12. | | DUARTE, K E. D.; BASSO, M. F.; OLIVEIRA, N. G. de; SILVA, J. C. F. da; GARCIA, B. de O.; DIAS, B. B. A.; CARDOSO, T. B.; NEPOMUCENO, A. L.; KOBAYASHI, A. K.; SANTIAGO, T. R.; SOUZA, W. R. de; MOLINARI, H. B. C. MicroRNAs expression profiles in early responses to different levels of water deficit in Setaria viridis. Physiology and Molecular Biology of Plants, v. 28, n. 8, p. 1607-1624, 2022.Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 1 |
Biblioteca(s): Embrapa Agroenergia; Embrapa Soja. |
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13. | | RIBEIRO, A. P.; SOUZA, W. R. de; MARTINS, P. K.; VINECKY, F.; DUARTE, K. E.; BASSO, M. F.; CUNHA, B. A. D. B. da; CAMPANHA, R. B.; OLIVEIRA, P. A. de; CENTENO, D. C.; CANÇADO, G. M. A.; MAGALHÃES, J. V. de; SOUSA, C. A. F. de; ANDRADE, A. C.; KOBAYASHI, A. K.; MOLINARI, H. B. C. Overexpression of BdMATE Gene improves aluminum tolerance in Setaria viridis. Frontiers in Plant Science, v. 8, artigo 685, 2017.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agroenergia. |
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14. | | RIBEIRO, A. P.; SOUZA, W. R. de; MARTINS, P. K.; VINECKY, F.; DUARTE, K. E.; BASSO, M. F.; DIAS, B. B. A.; CAMPANHA, R. B.; OLIVEIRA, P. A. de; CENTENO, D. C.; CANÇADO, G. M. de A.; MAGALHÃES, J. V. de; SOUSA, C. A. F. de; ANDRADE, A. C.; KOBAYASHI, A. K.; MOLINARI, H. B. C. Overexpression of BdMATE gene improves aluminum tolerance in Setaria viridis. Frontiers in Plant Science, v. 8, p. 1-12, June 2017. 12 p.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agricultura Digital; Embrapa Milho e Sorgo. |
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15. | | SOUZA, W. R. de; PACHECO, T. F.; DUARTE, K. E.; SAMPAIO, B. L.; OLIVEIRA, P. A. de; MARTINS, P. M.; SANTIAGO, T. R.; FORMIGHIERI, E. F.; VINECKY, F.; RIBEIRO, A. P.; DIAS, B. B. A.; KOBAYASHI, A. K.; MITCHELL, R. A. C.; RODRIGUES, D. de S.; MOLINARI, H. B. C. Silencing of a BAHD acyltransferase in sugarcane increases biomass digestibility. Biotechnology for Biofuels, v. 12, n. 111, p. 1-14, 2019.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agroenergia. |
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16. | | MOTA, T. R.; SOUZA, W. R. DE; OLIVEIRA, D. M.; MARTINS, P. K.; SAMPAIO, B. L.; VINECKY, F.; RIBEIRO, ANA. P.; DUARTE, K. E.; PACHECO, T. F.; MONTEIRO, N. DE K. V.; CAMPANHA, R. B.; MARCHIOSI, R.; VIEIRA, D. S.; KOBAYASHI, A. K.; OLIVEIRA, P. A. de; FERRARESE-FILHO, O.; MITCHELL, R. A. C.; MOLINARI, H. B. C.; SANTOS, W. D. D. Suppression of a BAHD acyltransferase decreases p-coumaroyl on arabinoxylan and improves biomass digestibility in the model grass Setaria viridis. The Plant Journal, n. 105, p. 136-150, 2021.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agroenergia. |
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17. | | SOUZA, W. R. de; OLIVEIRA, N. G. de; VINECY, F.; RIBEIRO, A. P.; BASSO, M. F.; CASARI, R. A. das C. N.; CUNHA, B. A. D. B. da; DUARTE, K. E.; SANTIAGO, T. R.; MARTIN, P. K.; AUCIQUE-PEREZ, C. E.; CRISTOFOLETTI JUNIOR, S. C.; NEPOMUCENO, A. L.; SOUSA, C. A. F. de; KOBAYASHI, A. K.; NAKASHIMA, K.; YAMAGUCHI-SHINOZAKI, K.; MOLINARI, H. B. C. Field evaluation of AtDREB2A CA overexpressing sugarcane for drought tolerance. Journal Agronomy and Crop Science, v. 00, p. 1-9, Apr. 2019.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agroenergia; Embrapa Meio-Norte. |
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18. | | SOUZA, W. R. de; MARTINS, P. K; FREEMAN, J.; PELLNY, T. K.; MICHAELSON, L. V.; SAMPAIO, B. L.; VINECKY, F.; RIBEIRO, A. P.; DIAS, B. B. A.; KOBAYASHI, A. K.; OLIVEIRA, P. A. de; CAMPANHA, R. B.; PACHECO, T. F.; MARTARELLO, D. C. I.; MARCHIOSI, R.; FERRARESE-FILHO, O.; SANTOS, W. D. dos; TRAMONTINA, R.; SQUINA, F. M.; CENTENO, D. C.; GASPAR, M.; BRAGA, M. R.; TINÉ, M. A. S.; RALPH, J.; MITCHELL, R. A. C.; MOLINARI, H. B. C. Suppression of a single BAHD gene in Setaria viridis causes large, stable decreases in cell wall feruloylation and increases biomass digestibility. New Phytologist, v. 218, p. 81-93, 2018.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agroenergia. |
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Registros recuperados : 18 | |
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