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Biblioteca(s): |
Embrapa Agrobiologia. |
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Data corrente: |
16/11/2020 |
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Data da última atualização: |
17/11/2020 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
FERREIRA, N. dos S.; SANTANNA, F. H.; REIS, V. M.; VOL´PIANO, C. G.; ROTHBALLER, M.; SCHWAB, S.; BAURA, V. A.; BALSANELLI, E.; PEDROSA, F. de OL; PASSAGLIA, L. M. P.; SOUZA, E. M. de; HARTMANN, A.; CASSAN, F.; ZILLI, J. E. |
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Afiliação: |
Natalia dos Santos Ferreira, UFRRJ; Fernando Hayashi SantAnna, UFRGS; VERONICA MASSENA REIS, CNPAB; Camila Gazolla Volpiano, UFRGS; Michael Rothballer, University Muenchen, Germany; STEFAN SCHWAB, CNPAB; Valter Antonio Baura, UFPR; Eduardo Balsanelli, UFPR; Fabio de Oliveira Pedrosa, UFPR; Luciane Maria Pereira Passaglia, UFRGS; Emanuel Maltempi de Souza, UFPR; Anton Hartmann, University Muenchen, Germany; Fabricio Cassan, Universidad Nacional de Río Cuarto; JERRI EDSON ZILLI, CNPAB. |
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Título: |
Genome-based reclassification of Azospirillum brasilense Sp245 as the type strain of Azospirillum baldaniorum sp. nov. |
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Ano de publicação: |
2020 |
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Fonte/Imprenta: |
International Journal of Systematic and Evolutionary Microbiology, 15 Oct., 2020 |
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DOI: |
10.1099/ijsem.0.004517 |
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Idioma: |
Inglês |
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Conteúdo: |
Azospirillum sp. strain Sp245T , originally identified as belonging to Azospirillum brasilense, is recognized as a plant-growthpromoting rhizobacterium due to its ability to fix atmospheric nitrogen and to produce plant-beneficial compounds. Azospirillum sp. Sp245T and other related strains were isolated from the root surfaces of different plants in Brazil. Cells are Gram-negative, curved or slightly curved rods, and motile with polar and lateral flagella. Their growth temperature varies between 20 to 38 °C and their carbon source utilization is similar to other Azospirillum species. A preliminary 16S rRNA sequence analysis showed that the new species is closely related to A. brasilense Sp7T and A. formosense CC-Nfb-7T . Housekeeping genes revealed that Azospirillum sp. Sp245T , BR 12001 and Vi22 form a separate cluster from strain A. formosense CC-Nfb-7T , and a group of strains closely related to A. brasilense Sp7T . Overall genome relatedness index (OGRI) analyses estimated based on average nucleotide identity (ANI) and digital DNA?DNA hybridization (dDDH) between Azospirillum sp. Sp245T and its close relatives to other Azospirillum species type strains, such as A. brasilense Sp7T and A. formosense CC-Nfb-7T , revealed values lower than the limit of species circumscription. Moreover, core-proteome phylogeny including 1079 common shared proteins showed the independent clusterization of A. brasilense Sp7T , A. formosense CC-Nfb-7T and Azospirillum sp. Sp245T , a finding that was corroborated by the genome clustering of OGRI values and housekeeping phylogenies. The DNA G+C content of the cluster of Sp245T was 68.4?68.6%. Based on the phylogenetic, genomic, phenotypical and physiological analysis, we propose that strain Sp245T together with the strains Vi22 and BR12001 represent a novel species of the genus Azospirillum, for which the name Azospirillum baldaniorum sp. nov. is proposed. The type strain is Sp245T (=BR 11005T =IBPPM 219T ) (GCF_007827915.1, GCF_000237365.1, and GCF_003119195.2) MenosAzospirillum sp. strain Sp245T , originally identified as belonging to Azospirillum brasilense, is recognized as a plant-growthpromoting rhizobacterium due to its ability to fix atmospheric nitrogen and to produce plant-beneficial compounds. Azospirillum sp. Sp245T and other related strains were isolated from the root surfaces of different plants in Brazil. Cells are Gram-negative, curved or slightly curved rods, and motile with polar and lateral flagella. Their growth temperature varies between 20 to 38 °C and their carbon source utilization is similar to other Azospirillum species. A preliminary 16S rRNA sequence analysis showed that the new species is closely related to A. brasilense Sp7T and A. formosense CC-Nfb-7T . Housekeeping genes revealed that Azospirillum sp. Sp245T , BR 12001 and Vi22 form a separate cluster from strain A. formosense CC-Nfb-7T , and a group of strains closely related to A. brasilense Sp7T . Overall genome relatedness index (OGRI) analyses estimated based on average nucleotide identity (ANI) and digital DNA?DNA hybridization (dDDH) between Azospirillum sp. Sp245T and its close relatives to other Azospirillum species type strains, such as A. brasilense Sp7T and A. formosense CC-Nfb-7T , revealed values lower than the limit of species circumscription. Moreover, core-proteome phylogeny including 1079 common shared proteins showed the independent clusterization of A. brasilense Sp7T , A. formosense CC-Nfb-7T and Azospirillum sp. Sp245T , a finding tha... Mostrar Tudo |
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Palavras-Chave: |
Phenotypical analysis; Phylogenetic; Plant-growth promoting bacteria. |
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Categoria do assunto: |
V Taxonomia de Organismos |
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Marc: |
LEADER 03035naa a2200325 a 4500
001 2126643
005 2020-11-17
008 2020 bl uuuu u00u1 u #d
024 7 $a10.1099/ijsem.0.004517$2DOI
100 1 $aFERREIRA, N. dos S.
245 $aGenome-based reclassification of Azospirillum brasilense Sp245 as the type strain of Azospirillum baldaniorum sp. nov.$h[electronic resource]
260 $c2020
520 $aAzospirillum sp. strain Sp245T , originally identified as belonging to Azospirillum brasilense, is recognized as a plant-growthpromoting rhizobacterium due to its ability to fix atmospheric nitrogen and to produce plant-beneficial compounds. Azospirillum sp. Sp245T and other related strains were isolated from the root surfaces of different plants in Brazil. Cells are Gram-negative, curved or slightly curved rods, and motile with polar and lateral flagella. Their growth temperature varies between 20 to 38 °C and their carbon source utilization is similar to other Azospirillum species. A preliminary 16S rRNA sequence analysis showed that the new species is closely related to A. brasilense Sp7T and A. formosense CC-Nfb-7T . Housekeeping genes revealed that Azospirillum sp. Sp245T , BR 12001 and Vi22 form a separate cluster from strain A. formosense CC-Nfb-7T , and a group of strains closely related to A. brasilense Sp7T . Overall genome relatedness index (OGRI) analyses estimated based on average nucleotide identity (ANI) and digital DNA?DNA hybridization (dDDH) between Azospirillum sp. Sp245T and its close relatives to other Azospirillum species type strains, such as A. brasilense Sp7T and A. formosense CC-Nfb-7T , revealed values lower than the limit of species circumscription. Moreover, core-proteome phylogeny including 1079 common shared proteins showed the independent clusterization of A. brasilense Sp7T , A. formosense CC-Nfb-7T and Azospirillum sp. Sp245T , a finding that was corroborated by the genome clustering of OGRI values and housekeeping phylogenies. The DNA G+C content of the cluster of Sp245T was 68.4?68.6%. Based on the phylogenetic, genomic, phenotypical and physiological analysis, we propose that strain Sp245T together with the strains Vi22 and BR12001 represent a novel species of the genus Azospirillum, for which the name Azospirillum baldaniorum sp. nov. is proposed. The type strain is Sp245T (=BR 11005T =IBPPM 219T ) (GCF_007827915.1, GCF_000237365.1, and GCF_003119195.2)
653 $aPhenotypical analysis
653 $aPhylogenetic
653 $aPlant-growth promoting bacteria
700 1 $aSANTANNA, F. H.
700 1 $aREIS, V. M.
700 1 $aVOL´PIANO, C. G.
700 1 $aROTHBALLER, M.
700 1 $aSCHWAB, S.
700 1 $aBAURA, V. A.
700 1 $aBALSANELLI, E.
700 1 $aPEDROSA, F. de OL
700 1 $aPASSAGLIA, L. M. P.
700 1 $aSOUZA, E. M. de
700 1 $aHARTMANN, A.
700 1 $aCASSAN, F.
700 1 $aZILLI, J. E.
773 $tInternational Journal of Systematic and Evolutionary Microbiology, 15 Oct., 2020
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Embrapa Agrobiologia (CNPAB) |
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| 2. |  | ALLQUERES, S.; MENESES, C.; ROTHBALLER, M.; MARTINS, O.; BALDANI, J. I.; SCHMID, M.; HARTMANN, A. The role of reactive oxygen species during gluconacetobacter diazotrophicus- rice interaction. INTERNATIONAL SYMPOSIUM ON BIOLOGICAL NITROGEN FIXATION WITH NON-LEGUMES, 13., 2012. Abstracts... Neuherberg: German Research Center for Environmental Health, 2012. 28| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agrobiologia. |
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| 3. | | HARTMANN, A.; JAMES, E. K.; BRUIJN, F. J. de; SCHWAB, S.; ROTHBALLER, M.; SCHMID, M. In situ localization and strain-specific quantification of Azospirillum and other dizotrophic plant plant growth promoting bacteria using antibodies and molecular probes. In: CASSÁN, F. D.; OKON, Y.; CREUS, C. M. (Ed.) Handbook for Azospirillum: techinical issues and protocols. Heidelberg: Springer, 2015 p. 45-64| Tipo: Capítulo em Livro Técnico-Científico |
| Biblioteca(s): Embrapa Agrobiologia. |
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| 4. | | ALQUÉRES, S.; MENESES, C. H. G de; ROUWS, L. F. M.; ROTHBALLER, M.; BALDANI, J. I.; SCHMID, M.; HARTMANN, A. The bacterial superoxide dismutase and glutathione reductase are crucial for endophytic colonization of rice roots by Gluconacetobacter diazotrophicus PAL5. Molecular Plant-Microbe Interactions, v. 26, n. 8, p. 937-946, 2013.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Agrobiologia. |
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| 5. | | HOFMANN, A.; RANKL, S.; HAN, S.; FISCHER, D.; SOARES, C. P.; VIDAL, M. S.; ROUWS, L. F. M.; BALDANI, J. I.; ROTHBALLER, M.; SCHRÖDER, P.; HARTMANN, A. Importance of quorum sensing signals in the communication of endophytic PGP-bacteria with their host plants. In: SYMPOSIUM ON BIOLOGICAL NITROGEN FIXATION, 16., LATINAMERICAN WORKSHOP OF PGPR, 4., RELARE, 19., 2018, Foz do Iguaçu. Book of abstract....Foz do Iguaçu: Emprapa, 2018. p. 39 Session 3, Short note III.II| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agrobiologia. |
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| 6. | | FERREIRA, N. dos S.; SANTANNA, F. H.; REIS, V. M.; VOL´PIANO, C. G.; ROTHBALLER, M.; SCHWAB, S.; BAURA, V. A.; BALSANELLI, E.; PEDROSA, F. de OL; PASSAGLIA, L. M. P.; SOUZA, E. M. de; HARTMANN, A.; CASSAN, F.; ZILLI, J. E. Genome-based reclassification of Azospirillum brasilense Sp245 as the type strain of Azospirillum baldaniorum sp. nov. International Journal of Systematic and Evolutionary Microbiology, 15 Oct., 2020| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
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| Registros recuperados : 6 | |
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