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| Registros recuperados : 37 | |
| 2. |  | PINENT, S. M. J.; MASCARO, F.; BOTTON, M.; REDAELLI, L. Thrips (Thysanoptera: Thripidae, Phlaeothripidae) damaging peach in Paranapanema, São Paulo State, Brazil. Neotropical Entomology, Londrina, v. 37, n. 4, p. 486-488, 2008. Disponível também no formato online.| Biblioteca(s): Embrapa Uva e Vinho. |
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| 3. | | LORSCHEITER, R.; REDAELLI, L. R.; BOTTON, M.; PIMENTEL, M. Z. Caracterização de danos causados por Anastrepha fraterculus (Wiedemann) (Diptera, Tephritidae) e desenvolvimento larval em frutos de duas cultivares de quivizeiro (Actinidia spp.) Revista Brasileira de Fruticultura, Jaboticabal, v. 34, n. 1, p. 67-76, mar. 2012.| Biblioteca(s): Embrapa Uva e Vinho. |
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| 4. | | BISOTTO-DE-OLIVEIRA, R.; REDAELLI, L. R.; BOTTON, M. Parasitóides associados a Cryptoblabes gnidiella (Lepidoptera, pyralidae) em videira, RS. Arquivos do Instituto Biológico, São Paulo, v. 74, n. 2, p. 115-119, 2007.| Biblioteca(s): Embrapa Uva e Vinho. |
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| 7. | | NONDILLO, A.; REDAELLI, L. R.; BOTTON, M.; PINENT, S. M. J.; GITZ, R. Exigências térmicas e estimativa do número de gerações anuais de Frankliniella occidentalis (Pergande) (Thysanptera: Thripidae) em morangueiro. Neotropical Entomology, Londrina, v. 37, n. 6, p. 646-650, 2008.| Biblioteca(s): Embrapa Uva e Vinho. |
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| 9. | | LORSCHEITER, R.; PIMENTEL, M. Z.; SILVEIRA, C. L. da; REDAELLI, L. R.; BOTTON, M. Desenvolvimento de imaturos de Anastrepha fraterculus (Diptera, Tephritidae) em duas cultivares de quivi em diferentes estágios de maturação. In: CONGRESSO BRASILEIRO DE ENTOMOLOGIA, 23., 2010, Natal, RN. Anais... Natal: SEB: EMPARN: UFRN: UFERSA: IFRN, 2010. 1 CD-ROM. Resumo.| Biblioteca(s): Embrapa Uva e Vinho. |
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| 13. | | BOTTON, M.; PINENT, S.; NONDILLO, A.; REDAELLI, L.; MASCARO, F. de A. Biologia, monitoramento e controle de tripes (Thysanoptera) em fruteiras de clima temperado. In: ENCONTRO NACIONAL SOBRE FRUTICULTURA DE CLIMA TEMPERADO, 10., 2007, Fraiburgo. Anais... Caçador, Epagri, 2007. v. 1, p. 251-265. Palestra.| Biblioteca(s): Embrapa Uva e Vinho. |
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| 15. | | RÊGO, D. R. G. P.; SANT'ANA, J.; BOTTON, M.; REDAELLI, L. R. Avaliação da mortalidade através do contato de machos de Grapholita molesta (Lepidoptera, Tortricidae) com o produto Splat Cida Grafo Bona. In: CONGRESSO BRASILEIRO DE ENTOMOLOGIA, 25., 2014, Goiânia, GO. Resumos... Goiânia: Embrapa Arroz e Feijão; Universidade Federal de Goiás, 2014.| Biblioteca(s): Embrapa Uva e Vinho. |
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| 16. | | RÊGO, D. R. G. P.; SANT'ANA, J.; REDAELLI, L. R.; BOTTON, M. Avaliação do raio de ação de armadilha Delta iscada com o feromônio sexual sintético de Grapholita molesta (Lepidoptera, Tortricidae), em pomares de pessegueiro. In: CONGRESSO BRASILEIRO DE ENTOMOLOGIA, 25., 2014, Goiânia, GO. Resumos... Goiânia: Embrapa Arroz e Feijão; Universidade Federal de Goiás, 2014.| Biblioteca(s): Embrapa Uva e Vinho. |
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| 17. | | LORSCHEITER, R.; PIMENTEL, M. Z.; SILVEIRA, C. L. da; BOTTON, M.; REDAELLI, L. R. Caracterização dos danos de Anastrepha fraterculus (Diptera, Tephritidae) em cultivares de quivi no início do desenvolvimento dos frutos. In: CONGRESSO BRASILEIRO DE ENTOMOLOGIA, 23., 2010, Natal, RN. Anais... Natal: SEB: EMPARN: UFRN: UFERSA: IFRN, 2010. 1 CD-ROM. Resumos.| Biblioteca(s): Embrapa Uva e Vinho. |
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| 19. | | SANTOS, J. P. dos; DAL SOGLIO, F. K.; REDAELLI, L. R.; COSTA, V. A.; FOELKEL, E. Parasitóides de lepidópteros minadores presentes em plantas de crescimento espontâneo em pomar orgânico de citros em Montenegro - RS. Revista Brasileira de Fruticultura, Jaboticabal, v. 29, n. 1, p. 080-084, abr. 2007.| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 20. | | DIEFENBACH, L. M. G.; REDAELLI, L. R.; SANTOS, R. S. S.; GASSEN, D. N. Parâmetros reprodutivos de Phytalus sanctipauli (Col., Scarabaeidae) em condições de laboratório. In: CONGRESSO BRASILEIRO DE ENTOMOLOGIA, 16.; ENCONTRO NACIONAL DE FITOSSANITARISTAS, 7., 1997, Salvador. Resumos... [Cruz das Almas]: SEB; EMBRAPA-CNPMF, [1997]. p. 58| Biblioteca(s): Embrapa Trigo. |
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| Registros recuperados : 37 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Café. |
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Data corrente: |
18/02/2011 |
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Data da última atualização: |
07/07/2011 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
B - 1 |
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Autoria: |
ALVARENGA, S. M.; CAIXETA, E. T.; HUFNAGEL, B.; THIEBAUT, F.; ZAMBOLIM, E. M.; ZAMBOLIM, L.; SAKIYAMA, N. S. |
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Afiliação: |
SAMUEL MAZZINGHY ALVARENGA, Universidade Federal de Viçosa; EVELINE TEIXEIRA CAIXETA, SAPC; BÁRBARA HUFNAGEL, Universidade Federal de Viçosa; FLÁVIA THIEBAUT, Universidade Federal de Viçosa; EUNIZE MACIEL ZAMBOLIM, Universidade Federal de Viçosa; LAÉRCIO ZAMBOLIM, Universidade Federal de Viçosa; NEY SUSSUMU SAKIYAMA, Universidade Federal de Viçosa. |
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Título: |
In silico identification of coffee genome expressed sequences potentially associated with resistance to diseases. |
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Ano de publicação: |
2010 |
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Fonte/Imprenta: |
GENETICS AND MOLECULAR BIOLOGY, v. 33, n.4, p. 795-806. 2010. |
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Páginas: |
795-806 |
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Idioma: |
Inglês |
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Conteúdo: |
Sequences potentially associated with coffee resistance to diseases were identified by in silico analyses using the database of the Brazilian Coffee Genome Project (BCGP). Keywords corresponding to plant resistance mechanisms to pathogens identified in the literature were used as baits for data mining. Expressed sequence tags (ESTs) related to each of these keywords were identified with tools available in the BCGP bioinformatics platform. A total of 11,300 ESTs were mined. These ESTs were clustered and formed 979 EST-contigs with similarities to chitinases, kinases, cytochrome P450 and nucleotide binding site-leucine rich repeat (NBS-LRR) proteins, as well as with proteins related to disease resistance, pathogenesis, hypersensitivity response (HR) and plant defense responses to diseases. The 140 EST-contigs identified through the keyword NBS-LRR were classified according to function. This classification allowed association of the predicted products of EST-contigs with biological processes, including host defense and apoptosis, and with molecular functions such as nucleotide binding and signal transducer activity. Fisher?s exact test was used to examine the significance of differences in contig expression between libraries representing the responses to biotic stress challenges and other libraries from the BCGP. This analysis revealed seven contigs highly similar to catalase, chitinase, protein with a BURP domain and unknown proteins. The involvement of these coffee proteins in plant responses to disease is discussed. K MenosSequences potentially associated with coffee resistance to diseases were identified by in silico analyses using the database of the Brazilian Coffee Genome Project (BCGP). Keywords corresponding to plant resistance mechanisms to pathogens identified in the literature were used as baits for data mining. Expressed sequence tags (ESTs) related to each of these keywords were identified with tools available in the BCGP bioinformatics platform. A total of 11,300 ESTs were mined. These ESTs were clustered and formed 979 EST-contigs with similarities to chitinases, kinases, cytochrome P450 and nucleotide binding site-leucine rich repeat (NBS-LRR) proteins, as well as with proteins related to disease resistance, pathogenesis, hypersensitivity response (HR) and plant defense responses to diseases. The 140 EST-contigs identified through the keyword NBS-LRR were classified according to function. This classification allowed association of the predicted products of EST-contigs with biological processes, including host defense and apoptosis, and with molecular functions such as nucleotide binding and signal transducer activity. Fisher?s exact test was used to examine the significance of differences in contig expression between libraries representing the responses to biotic stress challenges and other libraries from the BCGP. This analysis revealed seven contigs highly similar to catalase, chitinase, protein with a BURP domain and unknown proteins. The involvement of these coffee proteins i... Mostrar Tudo |
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Palavras-Chave: |
Data mining; ESTs. |
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Thesaurus NAL: |
Bioinformatics; Coffea; Genomics. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/29344/1/In-silico-identification.pdf
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Marc: |
LEADER 02301naa a2200265 a 4500
001 1880494
005 2011-07-07
008 2010 bl uuuu u00u1 u #d
100 1 $aALVARENGA, S. M.
245 $aIn silico identification of coffee genome expressed sequences potentially associated with resistance to diseases.$h[electronic resource]
260 $c2010
300 $a795-806
520 $aSequences potentially associated with coffee resistance to diseases were identified by in silico analyses using the database of the Brazilian Coffee Genome Project (BCGP). Keywords corresponding to plant resistance mechanisms to pathogens identified in the literature were used as baits for data mining. Expressed sequence tags (ESTs) related to each of these keywords were identified with tools available in the BCGP bioinformatics platform. A total of 11,300 ESTs were mined. These ESTs were clustered and formed 979 EST-contigs with similarities to chitinases, kinases, cytochrome P450 and nucleotide binding site-leucine rich repeat (NBS-LRR) proteins, as well as with proteins related to disease resistance, pathogenesis, hypersensitivity response (HR) and plant defense responses to diseases. The 140 EST-contigs identified through the keyword NBS-LRR were classified according to function. This classification allowed association of the predicted products of EST-contigs with biological processes, including host defense and apoptosis, and with molecular functions such as nucleotide binding and signal transducer activity. Fisher?s exact test was used to examine the significance of differences in contig expression between libraries representing the responses to biotic stress challenges and other libraries from the BCGP. This analysis revealed seven contigs highly similar to catalase, chitinase, protein with a BURP domain and unknown proteins. The involvement of these coffee proteins in plant responses to disease is discussed. K
650 $aBioinformatics
650 $aCoffea
650 $aGenomics
653 $aData mining
653 $aESTs
700 1 $aCAIXETA, E. T.
700 1 $aHUFNAGEL, B.
700 1 $aTHIEBAUT, F.
700 1 $aZAMBOLIM, E. M.
700 1 $aZAMBOLIM, L.
700 1 $aSAKIYAMA, N. S.
773 $tGENETICS AND MOLECULAR BIOLOGY$gv. 33, n.4, p. 795-806. 2010.
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Embrapa Café (CNPCa) |
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