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 | Acesso ao texto completo restrito à biblioteca da Embrapa Amazônia Oriental. Para informações adicionais entre em contato com cpatu.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Amazônia Oriental. |
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Data corrente: |
25/09/2017 |
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Data da última atualização: |
22/12/2021 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
MOREIRA, E. C. O.; PINHEIRO, D. G.; GORDO, S. M. C.; RODRIGUES, S. de M.; PESSOA, E.; SCHALLER, H.; LEMOS, O. F. de; SILVA, A.; SCHNEIDER, H.; SILVA JUNIOR, W. A.; SAMPAIO, I.; DARNET, S. |
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Afiliação: |
Edith C. O. Moreira, UFPA; Daniel G. Pinheiro, USP/UNESP; Sheila M. C. Gordo, UFPA; SIMONE DE MIRANDA RODRIGUES, CPATU; Elaine Pessoa, UFPA / Laboratoire International Associe PALMHEAT CNRS/ UFPA, Recherche et Cooperation Internationale (DERCI); Hubert Schaller, Universite de Strasbourg / Laboratoire International Associe PALMHEAT CNRS/ UFPA, Recherche et Cooperation Internationale (DERCI); ORIEL FILGUEIRA DE LEMOS, CPATU; Artur Silva, UFPA; Horacio Schneider, UFPA; Wilson A. Silva Jr., USP; Iracilda Sampaio, UFPA; Sylvain Darnet, UFPA / Laboratoire International Associe PALMHEAT CNRS/ UFPA, Recherche et Cooperation Internationale (DERCI). |
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Título: |
Transcriptional profiling by RNA sequencing of black pepper (Piper nigrum L.) roots infected by Fusarium solani f. sp. piperis. |
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Ano de publicação: |
2017 |
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Fonte/Imprenta: |
Acta Physiologiae Plantarum, v. 39, n. 10, article 239, Oct. 2017. |
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Idioma: |
Português |
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Conteúdo: |
Black pepper (Piper nigrum L.) is the most traded spice worldwide and therefore has great economic value. One of the major limitations of its production is yield losses in fields due to root rot, a disease caused by Fusarium solani f. sp. piperis. This soil-borne pathogen disseminates rapidly in tropical countries. Biotechnological breeding is often presented as an efficient tool to produce resistant pepper cultivars. An RNA-sequencing experiment was used to take a snapshot of the root transcriptome 60 days after infection by the pathogen. The mapping of 67 million SOLiD single-end reads to the Fusarium genome identified many fungal transcripts coding constitutive proteins and two proteins involved in virulence and conidial formation. The annotation of black pepper transcripts obtained by de novo assembly predicted three proteins restricted to this species. While these transcripts were upregulated in infected roots, the corresponding predicted proteins had no hit in databases. A global analysis of differentially expressed black pepper genes, using terms of gene ontology, has demonstrated an enrichment of genes involved in proteolysis, plastid degradation, cell-wall remodeling and secondary metabolism, consistent with toxicity and necrotrophic fungal interactions that force plants to collaborate at the metabolic level. Detailed descriptions of up- or downregulated genes associated with plant defense suggested several genes implied in the biosynthesis of isoprenoids, especially for an upregulated terpene synthase, a putative geranylgeranyl diphosphate synthase, and a downregulated brassinosteroid signaling component (BAK1). These results provide new clues for investigating further target genes and biotechnological approaches for breeding black pepper resistance to Fusarium. MenosBlack pepper (Piper nigrum L.) is the most traded spice worldwide and therefore has great economic value. One of the major limitations of its production is yield losses in fields due to root rot, a disease caused by Fusarium solani f. sp. piperis. This soil-borne pathogen disseminates rapidly in tropical countries. Biotechnological breeding is often presented as an efficient tool to produce resistant pepper cultivars. An RNA-sequencing experiment was used to take a snapshot of the root transcriptome 60 days after infection by the pathogen. The mapping of 67 million SOLiD single-end reads to the Fusarium genome identified many fungal transcripts coding constitutive proteins and two proteins involved in virulence and conidial formation. The annotation of black pepper transcripts obtained by de novo assembly predicted three proteins restricted to this species. While these transcripts were upregulated in infected roots, the corresponding predicted proteins had no hit in databases. A global analysis of differentially expressed black pepper genes, using terms of gene ontology, has demonstrated an enrichment of genes involved in proteolysis, plastid degradation, cell-wall remodeling and secondary metabolism, consistent with toxicity and necrotrophic fungal interactions that force plants to collaborate at the metabolic level. Detailed descriptions of up- or downregulated genes associated with plant defense suggested several genes implied in the biosynthesis of isoprenoids, especiall... Mostrar Tudo |
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Palavras-Chave: |
Melhoramento genético. |
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Thesagro: |
Doença; Pimenta. |
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Categoria do assunto: |
G Melhoramento Genético |
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Marc: |
LEADER 02668naa a2200289 a 4500
001 2076203
005 2021-12-22
008 2017 bl uuuu u00u1 u #d
100 1 $aMOREIRA, E. C. O.
245 $aTranscriptional profiling by RNA sequencing of black pepper (Piper nigrum L.) roots infected by Fusarium solani f. sp. piperis.$h[electronic resource]
260 $c2017
520 $aBlack pepper (Piper nigrum L.) is the most traded spice worldwide and therefore has great economic value. One of the major limitations of its production is yield losses in fields due to root rot, a disease caused by Fusarium solani f. sp. piperis. This soil-borne pathogen disseminates rapidly in tropical countries. Biotechnological breeding is often presented as an efficient tool to produce resistant pepper cultivars. An RNA-sequencing experiment was used to take a snapshot of the root transcriptome 60 days after infection by the pathogen. The mapping of 67 million SOLiD single-end reads to the Fusarium genome identified many fungal transcripts coding constitutive proteins and two proteins involved in virulence and conidial formation. The annotation of black pepper transcripts obtained by de novo assembly predicted three proteins restricted to this species. While these transcripts were upregulated in infected roots, the corresponding predicted proteins had no hit in databases. A global analysis of differentially expressed black pepper genes, using terms of gene ontology, has demonstrated an enrichment of genes involved in proteolysis, plastid degradation, cell-wall remodeling and secondary metabolism, consistent with toxicity and necrotrophic fungal interactions that force plants to collaborate at the metabolic level. Detailed descriptions of up- or downregulated genes associated with plant defense suggested several genes implied in the biosynthesis of isoprenoids, especially for an upregulated terpene synthase, a putative geranylgeranyl diphosphate synthase, and a downregulated brassinosteroid signaling component (BAK1). These results provide new clues for investigating further target genes and biotechnological approaches for breeding black pepper resistance to Fusarium.
650 $aDoença
650 $aPimenta
653 $aMelhoramento genético
700 1 $aPINHEIRO, D. G.
700 1 $aGORDO, S. M. C.
700 1 $aRODRIGUES, S. de M.
700 1 $aPESSOA, E.
700 1 $aSCHALLER, H.
700 1 $aLEMOS, O. F. de
700 1 $aSILVA, A.
700 1 $aSCHNEIDER, H.
700 1 $aSILVA JUNIOR, W. A.
700 1 $aSAMPAIO, I.
700 1 $aDARNET, S.
773 $tActa Physiologiae Plantarum$gv. 39, n. 10, article 239, Oct. 2017.
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Registro original: |
Embrapa Amazônia Oriental (CPATU) |
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| Registros recuperados : 8 | |
| 1. |  | LIOTTI, R. G.; SILVA, R. C. da; PINHEIRO, D. G.; SILVA, J. M. da; SILVA, G. F. da; MENDONÇA, E. A. F. de; SOARES, M. A. Characterization and comprehensive analysis of the ecological interaction networks of bacterial communities in Paullinia cupana var. sorbilis by 16S rRNA gene metabarcoding. World Journal of Microbiology and Biotechnology, v. 35, art. 182, 2019.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Amazônia Ocidental. |
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| 2. | | FALQUETO, S. A.; SOUSA, J. R. de; SILVA, R. C. da; SILVA, G. F. da; PINHEIRO, D. G.; SOARES, M. A. Larval gut microbiome of Pelidnota luridipes (Coleoptera: Scarabaeidae): high bacterial diversity, diferent metabolic profles on gut chambers and species with probiotic potential. World Journal of Microbiology and Biotechnology, v. 38, art. 210, 2022.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Amazônia Ocidental. |
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| 3. | | BELESINI, A. A.; CARVALHO, F. M. S.; TELLES, B. R.; CASTRO, G. M. de; GIACHETTO, P. F.; VANTINI, J. S.; CARLIN, S. D.; CAZETTA, J. O.; PINHEIRO, D. G.; FERRO, M. I. T. De novo transcriptome assembly of sugarcane leaves submitted to prolonged water-deficit stress. Genetics and Molecular Research, Ribeirão Preto, v. 16, n. 2, p. 1-20, 2017. Article gmr16028845.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Agricultura Digital. |
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| 4. | | BELESINI, A. A.; TELLES, B. R.; CASTRO, G. M. de; GIACHETTO, P. F.; VANTINI, J. da S.; CARVALHO, F. M. de S.; CARLIN, S. R.; CAZETTA, J. O.; FERRO, M. I. T.; PINHEIRO, D. G. de novo assembly and transcriptome analysis of sugarcane leaves from contrasting varieties submited to prolonged water stress. In: PLANT & ANIMAL GENOME CONFERENCE, 24., 2016, San Diego, CA. [Abstracts...]. San Diego: [s.n.], 2016. Não paginado. PAG 2016. Pôster P0792.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital. |
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| 5. | | TELLES, B. R.; CARVALHO, F. M. de S.; VANTINI, J. da S.; BELESINI, A. A.; CASTRO, G. M. de; GIACHETTO, P. F.; CARLIN, S. D.; SILVA, T. R. da; PINHEIRO, D. G.; CAZETTA, J. O.; FERRO, M. I. T. Prolonged water deficit reveals new profile of sugarcane gene expression and metabolic pathway related to tolerance. Sugar Tech, v. 21, n. 3, p. 451-461, May-June 2019.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 1 |
| Biblioteca(s): Embrapa Agricultura Digital. |
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| 6. | | MOREIRA, E. C. O.; PINHEIRO, D. G.; GORDO, S. M. C.; RODRIGUES, S. de M.; PESSOA, E.; SCHALLER, H.; LEMOS, O. F. de; SILVA, A.; SCHNEIDER, H.; SILVA JUNIOR, W. A.; SAMPAIO, I.; DARNET, S. Transcriptional profiling by RNA sequencing of black pepper (Piper nigrum L.) roots infected by Fusarium solani f. sp. piperis. Acta Physiologiae Plantarum, v. 39, n. 10, article 239, Oct. 2017.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 7. | | GORDO, S. M. C.; PINHEIRO, D. G.; MOREIRA, E. C. O.; RODRIGUES, S. M.; POLTRONIERI, M. C.; LEMOS, O. F. de; SILVA, I. T. da; RAMOS, R. T. J.; SILVA, A.; SCHNEIDER, H.; SILVA JUNIOR, W. A.; SAMPAIO, I.; DARNET, S. High-throughput sequencing of black pepper root transcriptome. BMC Plant Biology, v. 12, n. 168, 2012.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 8. | | SILVA, M. S. R. de A.; CARVALHO, L. A. L. de; BRAOS, L. B.; ANTUNES, L. F. DE S.; SILVA, C. S. R. de A.; SILVA, C. G. N. da; PINHEIRO, D. G.; CORREIA, M. E. F.; ARAUJO, E. da S.; COLNAGO, L. A.; DESOIGNIES, N.; ZONTA, E.; RIGOBELO, E. C. Effect of the application of vermicompost and millicompost humic acids about the soybean microbiome under water restriction conditions. Frontiers in Microbiology, 04 nov. 2022| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Agrobiologia; Embrapa Instrumentação. |
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| Registros recuperados : 8 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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