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Registro Completo |
Biblioteca(s): |
Embrapa Mandioca e Fruticultura. |
Data corrente: |
08/04/2019 |
Data da última atualização: |
06/12/2019 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
SILVA, L. L. da; BRAGANÇA, C. A. D.; FERREIRA, C. F.; DIAMANTINO, M. S. A. S.; OLIVEIRA, S. A. S. de. |
Afiliação: |
LEANDRO LOPES DA SILVA, UFRB; CARLOS AUGUSTO DÓREA BRAGANÇA, UFRB; CLAUDIA FORTES FERREIRA, CNPMF; MARIA SELMA ALVES SILVA DIAMANTINO; SAULO ALVES SANTOS DE OLIVEIRA, CNPMF. |
Título: |
Differentiation of lineages within "Colletotrichum gloeosporioides s.l." associated with cassava anthracnose disease by BOX" and ERIC"PCRs. |
Ano de publicação: |
2019 |
Fonte/Imprenta: |
Journal of Phytopathology, v.167, p.218-229, 2019. |
ISSN: |
1439-0434 |
Idioma: |
Inglês |
Conteúdo: |
Several molecular techniques have been used to differentiate species or genetic lineages of microorganisms prior to sequencing. Among them, BOX? and ERIC?PCRs may provide specific banding patterns for different species, allowing its differentiation. Therefore, the objective of this study was to evaluate these techniques as a tool for differentiation of phylogenetic lineages belonging to the Colletotrichum gloeosporioides species complex associated with cassava anthracnose disease. Sets of BOX? and ERIC?PCR primers were used to assess the differentiation of lineages belonging to the complex with 81 C. gloeosporioides sensu lato (s.l.) isolates from different cassava producing regions. Some were identified by sequencing, such as Colletotrichum fructicola, Colletotrichum tropicale, C. gloeosporioides s.s, Colletotrichum theobromicola, Colletotrichum siamense, Colletotrichum brevisporum and Colletotrichum sichuanensis. The primers were able to amplify DNA fragments from all isolates. The ERIC?PCR presented a wider range of banding patterns in comparison to BOX?PCR, providing better differentiation of the individuals, as well as a higher correlation with the phylogenetic data was obtained by ERIC?PCR and the combined data set for ?BOX?/ ERIC?PCRs,? inferred by Mantel test. However, the use of concatenated data (BOX?/ ERIC?PCRs) reduced the discriminatory capacity presented by ERIC?PCR alone, probably due to the lowest resolution of BOX?PCR. Therefore, ERIC?PCR technique enabled efficient differentiation of isolates belonging to the C. gloeosporioides complex and can be used to analyse multiple isolates in a collection and also being an important tool as a guide in the decision?making process prior to sequencing. Based on this methodology, it was possible to identify two new species associated with cassava anthracnose disease, C. brevisporum and C. sichuanensis, being the first report of these two species associated with cassava anthracnose disease in Brazil. MenosSeveral molecular techniques have been used to differentiate species or genetic lineages of microorganisms prior to sequencing. Among them, BOX? and ERIC?PCRs may provide specific banding patterns for different species, allowing its differentiation. Therefore, the objective of this study was to evaluate these techniques as a tool for differentiation of phylogenetic lineages belonging to the Colletotrichum gloeosporioides species complex associated with cassava anthracnose disease. Sets of BOX? and ERIC?PCR primers were used to assess the differentiation of lineages belonging to the complex with 81 C. gloeosporioides sensu lato (s.l.) isolates from different cassava producing regions. Some were identified by sequencing, such as Colletotrichum fructicola, Colletotrichum tropicale, C. gloeosporioides s.s, Colletotrichum theobromicola, Colletotrichum siamense, Colletotrichum brevisporum and Colletotrichum sichuanensis. The primers were able to amplify DNA fragments from all isolates. The ERIC?PCR presented a wider range of banding patterns in comparison to BOX?PCR, providing better differentiation of the individuals, as well as a higher correlation with the phylogenetic data was obtained by ERIC?PCR and the combined data set for ?BOX?/ ERIC?PCRs,? inferred by Mantel test. However, the use of concatenated data (BOX?/ ERIC?PCRs) reduced the discriminatory capacity presented by ERIC?PCR alone, probably due to the lowest resolution of BOX?PCR. Therefore, ERIC?PCR technique enabled e... Mostrar Tudo |
Thesagro: |
Doença de Planta. |
Thesaurus Nal: |
Plant diseases and disorders. |
Categoria do assunto: |
-- |
Marc: |
LEADER 02676naa a2200205 a 4500 001 2108006 005 2019-12-06 008 2019 bl uuuu u00u1 u #d 022 $a1439-0434 100 1 $aSILVA, L. L. da 245 $aDifferentiation of lineages within "Colletotrichum gloeosporioides s.l." associated with cassava anthracnose disease by BOX" and ERIC"PCRs.$h[electronic resource] 260 $c2019 520 $aSeveral molecular techniques have been used to differentiate species or genetic lineages of microorganisms prior to sequencing. Among them, BOX? and ERIC?PCRs may provide specific banding patterns for different species, allowing its differentiation. Therefore, the objective of this study was to evaluate these techniques as a tool for differentiation of phylogenetic lineages belonging to the Colletotrichum gloeosporioides species complex associated with cassava anthracnose disease. Sets of BOX? and ERIC?PCR primers were used to assess the differentiation of lineages belonging to the complex with 81 C. gloeosporioides sensu lato (s.l.) isolates from different cassava producing regions. Some were identified by sequencing, such as Colletotrichum fructicola, Colletotrichum tropicale, C. gloeosporioides s.s, Colletotrichum theobromicola, Colletotrichum siamense, Colletotrichum brevisporum and Colletotrichum sichuanensis. The primers were able to amplify DNA fragments from all isolates. The ERIC?PCR presented a wider range of banding patterns in comparison to BOX?PCR, providing better differentiation of the individuals, as well as a higher correlation with the phylogenetic data was obtained by ERIC?PCR and the combined data set for ?BOX?/ ERIC?PCRs,? inferred by Mantel test. However, the use of concatenated data (BOX?/ ERIC?PCRs) reduced the discriminatory capacity presented by ERIC?PCR alone, probably due to the lowest resolution of BOX?PCR. Therefore, ERIC?PCR technique enabled efficient differentiation of isolates belonging to the C. gloeosporioides complex and can be used to analyse multiple isolates in a collection and also being an important tool as a guide in the decision?making process prior to sequencing. Based on this methodology, it was possible to identify two new species associated with cassava anthracnose disease, C. brevisporum and C. sichuanensis, being the first report of these two species associated with cassava anthracnose disease in Brazil. 650 $aPlant diseases and disorders 650 $aDoença de Planta 700 1 $aBRAGANÇA, C. A. D. 700 1 $aFERREIRA, C. F. 700 1 $aDIAMANTINO, M. S. A. S. 700 1 $aOLIVEIRA, S. A. S. de 773 $tJournal of Phytopathology$gv.167, p.218-229, 2019.
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Embrapa Mandioca e Fruticultura (CNPMF) |
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Registro Completo
Biblioteca(s): |
Embrapa Pesca e Aquicultura. |
Data corrente: |
05/04/2023 |
Data da última atualização: |
05/04/2023 |
Tipo da produção científica: |
Video/DVD |
Autoria: |
ALCÂNTARA, P. H. R. de; BARBOSA, C. F.; GRISE, M. M. |
Afiliação: |
PEDRO HENRIQUE R DE ALCANTARA, CNPASA; CLAUDIO FRANCA BARBOSA, CNPASA; MARCIA MASCARENHAS GRISE, CNPASA. |
Título: |
ABC Corte: viabilizando uma pecuária de corte cada vez mais sustentável. |
Ano de publicação: |
2023 |
Fonte/Imprenta: |
Palmas: Embrapa Pesca e Aquicultura, [2023]. |
Descrição Física: |
1 vídeo, color. (7 min). |
Idioma: |
Português |
Notas: |
Roteiro: Pedro Henrique Rezende de Alcântara, CNPASA. |
Conteúdo: |
Vídeo técnico sobre programa que trabalha com transferência de tecnologias para pecuária de corte sustentável. O ABC Corte está presente no Tocantins, no Pará e no Mato Grosso. O programa é uma realização da Embrapa e da CI Brasil. |
Thesagro: |
Extensão Rural; Gado de Corte; Pecuária; Transferência de Tecnologia. |
Thesaurus NAL: |
Beef cattle; Rural development; Technology transfer. |
Categoria do assunto: |
-- |
URL: |
https://youtu.be/_Bp4svSFblI
|
Marc: |
LEADER 01005nam a2200241 a 4500 001 2153022 005 2023-04-05 008 2023 bl --- 0-- m #d 100 1 $aALCÂNTARA, P. H. R. de 245 $aABC Corte$bviabilizando uma pecuária de corte cada vez mais sustentável.$h[electronic resource] 260 $aPalmas: Embrapa Pesca e Aquicultura, [2023].$c2023 300 $c1 vídeo, color. (7 min). 500 $aRoteiro: Pedro Henrique Rezende de Alcântara, CNPASA. 520 $aVídeo técnico sobre programa que trabalha com transferência de tecnologias para pecuária de corte sustentável. O ABC Corte está presente no Tocantins, no Pará e no Mato Grosso. O programa é uma realização da Embrapa e da CI Brasil. 650 $aBeef cattle 650 $aRural development 650 $aTechnology transfer 650 $aExtensão Rural 650 $aGado de Corte 650 $aPecuária 650 $aTransferência de Tecnologia 700 1 $aBARBOSA, C. F. 700 1 $aGRISE, M. M.
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