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Registro Completo |
Biblioteca(s): |
Embrapa Soja. |
Data corrente: |
25/01/2011 |
Data da última atualização: |
17/06/2011 |
Tipo da produção científica: |
Resumo em Anais de Congresso |
Autoria: |
NASCIMENTO, L. C.; COSTA, G. G. L.; MEYER, L.; BINNECK, E.; RODRIGUES, F.; KULCHESKI, F. R.; MARGIS, R.; KIDO, E. A.; MARCELINO, F. C.; NEPOMUCENO, A. L.; ABDELNOOR, R. V.; PEREIRA, G. A. G.; CARAZZOLLE, M. F. |
Afiliação: |
L. C. NASCIMENTO, Universidade Estadual de Campinas; G. G. L. COSTA, Universidade Estadual de Campinas; L. MEYER, Universidade Estadual de Campinas; ELISEU BINNECK, CNPSO; F. RODRIGUES; F. R. KULCHESKI, UFRGS; R. MARGIS, UFRGS; E. A. KIDO, Universidade Federal de Pernambuco; FRANCISMAR CORREA MARCELINO, CNPSO; ALEXANDRE LIMA NEPOMUCENO, CNPSO; RICARDO VILELA ABDELNOOR, CNPSO; G. A. G. PEREIRA, Universidade Estadual de Campinas; M. F. CARAZZOLLE, Universidade Estadual de Campinas. |
Título: |
A brazilian soybean database. |
Ano de publicação: |
2010 |
Fonte/Imprenta: |
In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 6., 2010, Ouro Preto. Abstracts book... Ouro Preto: AB3C, 2010. p. 120. X-Meeting 2010. |
Idioma: |
Inglês |
Conteúdo: |
Soybean is a legume with large economic importance in the international market, with a world production of almost two hundred and ten million tons in the 2008/2009 harvest. Brazil appears as the second largest producer, with about twenty-five percent of the world production. In 2007, the Brazilian Soybean Genome Consortium (GENOSOJA) was established with the goal of integrating several institutions currently working with soybean genomics in Brazil. The project has an initiative to search for new treats to improve the soybean production process, emphasizing in stresses that affect the national production, like the occurrence of droughts, pests attacks and the Asian Rust disease. Among the objectives of GENOSOJA is the creation of a relational database, integrating the results achieved by different methodologies utilized in the project. In the GENOSOJA context, we created a brazilian soybean database, integrating: (1) public data consisting of genome and predicted genes from JGI, an assembly of 1,276,813 of NCBI ESTs from several cultivars and 4,712 full-length cDNA sequences from one japanese cultivar; and (2) private data consisting of (i ) three cDNA libraries explored by SuperSAGE methodology, resulting in 4,373,053 tags of 26 bp, (ii ) 22 cDNA subctrative libraries from several brazilian cultivars under different stresses and (iii ) several libraries of soybean microRNAs under eight conditions and size between 19 and 24 bp. All these data were sequenced using Solexa/Illumina sequencing technology. This database offers to the users some features, including keywords searches, statics comparisons, automatic annotation, gene ontology classification and gene expression of the genes under certain conditions. All data are storage in a Fedora Linux machine, running the MySQL database server. The web interface is based in a combination of CGI scripts using Perl language (including BioPerl module) and the Apache Web Server. MenosSoybean is a legume with large economic importance in the international market, with a world production of almost two hundred and ten million tons in the 2008/2009 harvest. Brazil appears as the second largest producer, with about twenty-five percent of the world production. In 2007, the Brazilian Soybean Genome Consortium (GENOSOJA) was established with the goal of integrating several institutions currently working with soybean genomics in Brazil. The project has an initiative to search for new treats to improve the soybean production process, emphasizing in stresses that affect the national production, like the occurrence of droughts, pests attacks and the Asian Rust disease. Among the objectives of GENOSOJA is the creation of a relational database, integrating the results achieved by different methodologies utilized in the project. In the GENOSOJA context, we created a brazilian soybean database, integrating: (1) public data consisting of genome and predicted genes from JGI, an assembly of 1,276,813 of NCBI ESTs from several cultivars and 4,712 full-length cDNA sequences from one japanese cultivar; and (2) private data consisting of (i ) three cDNA libraries explored by SuperSAGE methodology, resulting in 4,373,053 tags of 26 bp, (ii ) 22 cDNA subctrative libraries from several brazilian cultivars under different stresses and (iii ) several libraries of soybean microRNAs under eight conditions and size between 19 and 24 bp. All these data were sequenced using Solexa/Illum... Mostrar Tudo |
Palavras-Chave: |
Soybean. |
Categoria do assunto: |
-- |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/36659/1/Xmeeting-Abstracts-2010.pdf
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Marc: |
LEADER 02779nam a2200265 a 4500 001 1874417 005 2011-06-17 008 2010 bl uuuu u00u1 u #d 100 1 $aNASCIMENTO, L. C. 245 $aA brazilian soybean database. 260 $aIn: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 6., 2010, Ouro Preto. Abstracts book... Ouro Preto: AB3C, 2010. p. 120. X-Meeting 2010.$c2010 520 $aSoybean is a legume with large economic importance in the international market, with a world production of almost two hundred and ten million tons in the 2008/2009 harvest. Brazil appears as the second largest producer, with about twenty-five percent of the world production. In 2007, the Brazilian Soybean Genome Consortium (GENOSOJA) was established with the goal of integrating several institutions currently working with soybean genomics in Brazil. The project has an initiative to search for new treats to improve the soybean production process, emphasizing in stresses that affect the national production, like the occurrence of droughts, pests attacks and the Asian Rust disease. Among the objectives of GENOSOJA is the creation of a relational database, integrating the results achieved by different methodologies utilized in the project. In the GENOSOJA context, we created a brazilian soybean database, integrating: (1) public data consisting of genome and predicted genes from JGI, an assembly of 1,276,813 of NCBI ESTs from several cultivars and 4,712 full-length cDNA sequences from one japanese cultivar; and (2) private data consisting of (i ) three cDNA libraries explored by SuperSAGE methodology, resulting in 4,373,053 tags of 26 bp, (ii ) 22 cDNA subctrative libraries from several brazilian cultivars under different stresses and (iii ) several libraries of soybean microRNAs under eight conditions and size between 19 and 24 bp. All these data were sequenced using Solexa/Illumina sequencing technology. This database offers to the users some features, including keywords searches, statics comparisons, automatic annotation, gene ontology classification and gene expression of the genes under certain conditions. All data are storage in a Fedora Linux machine, running the MySQL database server. The web interface is based in a combination of CGI scripts using Perl language (including BioPerl module) and the Apache Web Server. 653 $aSoybean 700 1 $aCOSTA, G. G. L. 700 1 $aMEYER, L. 700 1 $aBINNECK, E. 700 1 $aRODRIGUES, F. 700 1 $aKULCHESKI, F. R. 700 1 $aMARGIS, R. 700 1 $aKIDO, E. A. 700 1 $aMARCELINO, F. C. 700 1 $aNEPOMUCENO, A. L. 700 1 $aABDELNOOR, R. V. 700 1 $aPEREIRA, G. A. G. 700 1 $aCARAZZOLLE, M. F.
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Registro original: |
Embrapa Soja (CNPSO) |
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Registros recuperados : 20 | |
5. | | KULCHESKI, F. R.; MARCELINO-GUIMARAES, F. C.; NEPOMUCENO, A. L.; ABDELNOOR, R. V.; MARGIS, R. The use of microRNAs as reference genes for quantitative polymerase chain reaction in soybean. Analytical Biochemistry, Amsterdam, v. 406, n. 2, p. 185-192, nov. 2010.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Soja. |
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7. | | TURCHETTO ZOLET, A. C.; CRUZ, F.; VENDRAMIN, G. G.; SIMON, M. F.; SALGUEIRO, F.; MARGIS PINHEIRO, M.; MARGIS, R. Large-scale phylogeography of the disjunct Neotropical tree species Schizolobium parahyba (Fabaceae-Caesalpinioideae). Molecular Phylogenetics and Evolution, v. 65, p. 174-182, 2012.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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8. | | COSTENARO-DA-SILVA, D.; PASSAIA, G.; HENRIQUES, J. A. P.; MARGIS, R.; PASQUALI, G.; REVERS, L. F. Identification and expression analysis of genes associated with the early berry development in the seedless grapevine (Vitis vinifera L.) cultivar Sultanine. Plant Science, Limerick, v. 179, n. 5, p. 510-519, nov. 2010. 179 510-519Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
Biblioteca(s): Embrapa Uva e Vinho. |
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9. | | COSTENARO-DA-SILVA, D.; PASSAIA, G.; HENRIQUES, J. A. P.; MARGIS, R.; PASQUALI, G.; REVERS, L. F. Identification and expression analysis of genes associated with the early berry development in the seedless grapevine (Vitis vinifera L.) cultivar Sultanine. In: CONGRESSO BRASILEIRO DE GENÉTICA, 56., 2010, Guarujá. Resumos... Ribeirão Preto: Sociedade Brasileira de Genética, 2010. p. 206. Resumo.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Uva e Vinho. |
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10. | | BUSS, J. H.; GALLI, V.; LABONDE, J.; MESSIAS, R.; SILVA, S. D. dos A. e; MARGIS, R. Expressão de dgat2 ao longo do desenvolvimento de sementes de tungue (Vernicia fordii). In: SIMPÓSIO ESTADUAL DE AGROENERGIA, 4.; REUNIÃO TÉCNICA DE AGROENERGIA, 4., 2012, AMRIGS: Porto Alegre. Anais... Pelotas: Embrapa Clima Temperado, 2012. Organizado por Sérgio Delmar dos Anjos e Silva Ivan Rodrigues de Almeida.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Clima Temperado. |
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11. | | DIAS, B. F. de O.; SIMÕES-ARAÚJO, J. L.; RUSSO, C. A. M.; MARGIS, R.; ALVES-FERREIRA, M. Unravelling MADS-box gene family in Eucalyptus spp.: A starting point to an understanding of their developmental role in trees. Genetics and Molecular Biology, São Paulo, v. 28, n. 3, Suppl., p. 501-510, 2005.Biblioteca(s): Embrapa Agrobiologia. |
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12. | | NASCIMENTO, L. C.; COSTA, G. G. L.; MEYER, L.; BINNECK, E.; RODRIGUES, F.; KULCHESKI, F. R.; MARGIS, R.; KIDO, E. A.; MARCELINO, F. C.; NEPOMUCENO, A. L.; ABDELNOOR, R. V.; PEREIRA, G. A. G.; CARAZZOLLE, M. F. A brazilian soybean database. In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 6., 2010, Ouro Preto. Abstracts book... Ouro Preto: AB3C, 2010. p. 120. X-Meeting 2010.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Soja. |
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13. | | MAGALHÃES JÚNIOR, A. M. de; MARTINS, J. F. da S.; TERRES, A. L.; FAGUNDES, P. R. R.; FRANCO; D. F.; MARGIS, R.; MARGIS, M.; DODE, L. B.; PETERS, J. A. Desenvolvimento de linhagens transgênicas de arroz irrigado( Oryza sativa L.) através da engenharia genética. Pelotas: Embrapa-CPACT, 1999. 4 p. (EMBRAPA- CPACT. Pesquisa em Andamento, 51)Biblioteca(s): Embrapa Clima Temperado. |
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14. | | PIROVANI, C. P.; SANTIAGO, A. da S.; SANTOS, L. S. dos; MICHELI, F.; MARGIS, R.; GESTEIRA, A. da S.; ALVIM, F. C.; PEREIRA, G. A. G.; CASCARDO, J. C. de M. Theobroma cacao cystatins impair Moniliophthora perniciosa mycelial growth and are involved in postponing cell death symptoms. Planta, Heidelberg, v. 232, n. 6, p. 1485–1497, 2010. Disponível em: . Acesso em 26 out. 2010.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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15. | | KULCHESKI, F. R.; OLIVEIRA, L. F. V.; MOLINA, L. G.; ALMERAO, M. P.; RODRIGUES, F. A.; MARCOLINO, J.; BARBOSA, J. F.; STOLF-MOREIRA, R.; NEPOMUCENO, A. L.; MARCELINO-GUIMARÃES, F. C.; ABDELNOOR, R. V.; NASCIMENTO, L. C.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; MARGIS, R. Identification of novel soybean microRNAs involved in abiotic and biotic stresses. BMC Genomics, v. 12, n. 307, jun. 2011. 17 p.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Soja. |
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16. | | KULCHESKI, F. R.; OLIVEIRA, L. F. V.; MOLINA, L. G.; ALMERÃO, M.; RODRIGUES, F. A.; MARCOLINO, J.; BARBOSA, J. F.; STOLF-MOREIRA, R.; NEPOMUCENO, A. L.; MARCELINO, F. C.; ABDELNOOR, R. V.; NASCIMENTO, L. C.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; MARGIS, R. Identification of novel soybean microRNAs involved in abiotic and biotic stresses. In: BRAZILIAN SYMPOSIUM ON PLANT MOLECULAR BIOLOGY, 3., 2011, Ilhéus. [Abstracts...]. [Ribeirão Preto]: SBG, 2011. 1 p. 1 CD-ROM.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Soja. |
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17. | | WEBER, R. L. M. W.; WIEBKE-STROHM, B.; BREDEMEIER, C.; MARGIS-PINHEIRO, M.; BRITO, G. G. de; RECHENMACHER, C.; BERTAGNOLLI, P. F.; SÁ, M. E. L. de; CAMPOS, M. de A.; AMORIM, R. M. S. de; BENEVENTI, M. A.; MARGIS, R.; GROSSI-DE SA, M. F.; BODANESE-ZANETTINI, M. H. Expression of an osmotin-like protein from Solanum nigrum confers drought tolerance in transgenic soybean. BMC Plant Biology, v. 14:343, 2014. (Open Access).Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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18. | | ABDELNOOR, R. V.; NEPOMUCENO, A. L.; BARROS, E. G.; GROSSI-DE-SA, M. F.; BINNECK, E.; MARCELINO, F. C.; BROMMONSCHENKEL, S. H.; ALMEIDA, J. D.; BENKO-ISEPPON, A. M.; SCHUSTER, I; KIDO, E. A.; LOUREIRO, M. E.; MARGIS, R.; HUNGRIA, M.; MOREIRA, M. A.; BARACAT-PEREIRA, M. C.; FIETTO, L. G.; BODANESE-ZANNETINI, M. H.; ROMANO, E.; ZERBINI, F. M.; LEMOS, E. G. M.; PEREIRA, G. A. G. GENOSOJA: a Brazilian Soybean Genome Consortium. In: THE INTERNATIONAL CONFERENCE ON THE STATUS OF PLANT & ANIMAL GENOME RESEARCH, 17., 2009, San Diego. Final Abstract Guide. [S.l.], 2009. p. 55, P034.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Soja. |
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19. | | ABDELNOOR, R. V.; NEPOMUCENO, A. L.; BARROS, E. G.; GROSSI DE SA, M. F.; BINNECK, E.; MARCELINO, F. C.; BROMMONSCHENKEL, S. H.; ALMEIDA, J. D.; BENKO-ISEPPON, A. M.; SCHUSTER, I; KIDO, E. A.; LOUREIRO, M. E.; MARGIS, R.; HUNGRIA, M.; MOREIRA, M. A.; BARACAT-PEREIRA, M. C.; FIETTO, L. G.; BODANESE-ZANNETINI, M. H.; ROMANO, E.; ZERBINI, F. M.; LEMOS, E. G. M.; PEREIRA, G. A. G. GENOSOJA: a Brazilian soybean genome consortium. In: WORLD SOYBEAN RESEARCH CONFERENCE, 8., 2009, Beijing. Developing a global soy blueprint for a safe secure and sustainable supply: abstracts. Beijing: Chinese Academy of Agricultural Sciences: Institute of Crop Science, 2009. p. 108, ref. O201. Apresentado também no: In: INTERNATIONAL PLANT & ANIMAL GENOMES CONFERENCE, 17., 2009, San Diego, CA. [Proceedings...]. [S. l.: s.n.], 2009.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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20. | | ABDELNOOR, R. V.; NEPOMUCENO, A. L.; BARROS, E. G. de; SA, M. de F. G. de; BINNECK, E.; MARCELINO, F. C.; BROMMONSCHENKEL, S. H.; ALMEIDA, J.; ISEPPON, A. M. B.; SCHUSTER, I.; KIDO, E. A.; LOUREIRO, M. E.; MARGIS, R.; HUNGRIA, M.; MOREIRA, M. A.; BACARAT-PEREIRA, M. C.; FIETTO, L. G.; BODANESE-ZANETTINI, M. H.; ROMANO, E.; ZERBINI, F. M.; LEMOS, E. G. de M.; PEREIRA, G. A. G. GENOSOJA - A brazilian soybean genome consortium. In: WORLD SOYBEAN RESEARCH CONFERENCE, 8., 2009, Beijing. Developing a global soy blueprint for a safe secure and sustainable supply: abstracts. Beijing: Chinese Academy of Agricultural Sciences: Institute of Crop Science, 2009. p. 108, ref. O201. WSRC 2009. Editado por Lijuan Qiu, Rongxia Guan, Jian Jin, Qijan Song, Shuntang Guo, Wenbin Li, Yuanchao Wang, Tianfu Han, Xiaobing Liu, Deyue Yu, Lianzhou Jiang, Deliang Peng.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Soja. |
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Registros recuperados : 20 | |
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