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Registro Completo |
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Biblioteca(s): |
Embrapa Soja. |
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Data corrente: |
02/09/2013 |
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Data da última atualização: |
04/04/2022 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
LOPES-CAITAR, V. S.; CARVALHO, M. C. C. G. de; LUANA M. DARBEN; KUWAHARA, M. K.; NEPOMUCENO, A. L.; DIAS, W. P.; ABDELNOOR, R. V.; MARCELINO-GUIMARÃES, F. C. |
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Afiliação: |
VALÉRIA S. LOPES-CAITAR; MAYRA C. C. G. DE CARVALHO, UENP; MARCIA KAMOGAE KUWAHARA, CNPSO; ALEXANDRE LIMA NEPOMUCENO, SRI; WALDIR PEREIRA DIAS, CNPSO; RICARDO VILELA ABDELNOOR, CNPSO; FRANCISMAR CORREA MARCELINO GUIMARA, CNPSO. |
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Título: |
Genome-wide analysis of the Hsp20 gene family in soybean: comprehensive sequence, genomic organization and expression profile analysis under abiotic and biotic stresses. |
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Ano de publicação: |
2013 |
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Fonte/Imprenta: |
BMC Genomics, v. 14, article 577, 2013. |
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Páginas: |
17 p. |
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ISSN: |
1471-2164 |
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DOI: |
10.1186/1471-2164-14-577 |
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Idioma: |
Inglês |
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Conteúdo: |
The Hsp20 genes are associated with stress caused by HS and other abiotic factors, but have recently been found to be associated with the response to biotic stresses. These genes represent the most abundant class among the HSPs in plants, but little is known about this gene family in soybean. Because of their apparent multifunctionality, these proteins are promising targets for developing crop varieties that are better adapted to biotic and abiotic stresses. Thus, in the present study an in silico identification of GmHsp20 gene family members was performed, and the genes were characterized and subjected to in vivo expression analysis under biotic and abiotic stresses. A search of the available soybean genome databases revealed 51 gene models as potential GmHsp20 candidates. The 51 GmHsp20 genes were distributed across a total of 15 subfamilies where a specific predicted secondary structure was identified. Based on in vivo analysis, only 47 soybean Hsp20 genes were responsive to heat shock stress. Among the GmHsp20 genes that were potentials HSR, five were also cold-induced, and another five, in addition to one GmAcd gene, were responsive to Meloidogyne javanica infection. Furthermore, one predicted GmHsp20 was shown to be responsive only to nematode infection; no expression change was detected under other stress conditions. Some of the biotic stress-responsive GmHsp20 genes exhibited a divergent expression pattern between resistant and susceptible soybean genotypes under M. javanica infection. The putative regulatory elements presenting some conservation level in the GmHsp20 promoters included HSE, W-box, CAAT box, and TA-rich elements. Some of these putative elements showed a unique occurrence pattern among genes responsive to nematode infection. The evolution of Hsp20 family in soybean genome has most likely involved a total of 23 gene duplications. The obtained expression profiles revealed that the majority of the 51 GmHsp20 candidates are induced under HT, but other members of this family could also be involved in normal cellular functions, unrelated to HT. Some of the GmHsp20 genes might be specialized to respond to nematode stress, and the predicted promoter structure of these genes seems to have a particular conserved pattern related to their biological function. MenosThe Hsp20 genes are associated with stress caused by HS and other abiotic factors, but have recently been found to be associated with the response to biotic stresses. These genes represent the most abundant class among the HSPs in plants, but little is known about this gene family in soybean. Because of their apparent multifunctionality, these proteins are promising targets for developing crop varieties that are better adapted to biotic and abiotic stresses. Thus, in the present study an in silico identification of GmHsp20 gene family members was performed, and the genes were characterized and subjected to in vivo expression analysis under biotic and abiotic stresses. A search of the available soybean genome databases revealed 51 gene models as potential GmHsp20 candidates. The 51 GmHsp20 genes were distributed across a total of 15 subfamilies where a specific predicted secondary structure was identified. Based on in vivo analysis, only 47 soybean Hsp20 genes were responsive to heat shock stress. Among the GmHsp20 genes that were potentials HSR, five were also cold-induced, and another five, in addition to one GmAcd gene, were responsive to Meloidogyne javanica infection. Furthermore, one predicted GmHsp20 was shown to be responsive only to nematode infection; no expression change was detected under other stress conditions. Some of the biotic stress-responsive GmHsp20 genes exhibited a divergent expression pattern between resistant and susceptible soybean genotypes under M. ... Mostrar Tudo |
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Thesagro: |
Soja. |
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Thesaurus Nal: |
Soybeans. |
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Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/102608/1/genome-wide.pdf
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Marc: |
LEADER 03155naa a2200265 a 4500
001 1965345
005 2022-04-04
008 2013 bl uuuu u00u1 u #d
022 $a1471-2164
024 7 $a10.1186/1471-2164-14-577$2DOI
100 1 $aLOPES-CAITAR, V. S.
245 $aGenome-wide analysis of the Hsp20 gene family in soybean$bcomprehensive sequence, genomic organization and expression profile analysis under abiotic and biotic stresses.$h[electronic resource]
260 $c2013
300 $a17 p.
520 $aThe Hsp20 genes are associated with stress caused by HS and other abiotic factors, but have recently been found to be associated with the response to biotic stresses. These genes represent the most abundant class among the HSPs in plants, but little is known about this gene family in soybean. Because of their apparent multifunctionality, these proteins are promising targets for developing crop varieties that are better adapted to biotic and abiotic stresses. Thus, in the present study an in silico identification of GmHsp20 gene family members was performed, and the genes were characterized and subjected to in vivo expression analysis under biotic and abiotic stresses. A search of the available soybean genome databases revealed 51 gene models as potential GmHsp20 candidates. The 51 GmHsp20 genes were distributed across a total of 15 subfamilies where a specific predicted secondary structure was identified. Based on in vivo analysis, only 47 soybean Hsp20 genes were responsive to heat shock stress. Among the GmHsp20 genes that were potentials HSR, five were also cold-induced, and another five, in addition to one GmAcd gene, were responsive to Meloidogyne javanica infection. Furthermore, one predicted GmHsp20 was shown to be responsive only to nematode infection; no expression change was detected under other stress conditions. Some of the biotic stress-responsive GmHsp20 genes exhibited a divergent expression pattern between resistant and susceptible soybean genotypes under M. javanica infection. The putative regulatory elements presenting some conservation level in the GmHsp20 promoters included HSE, W-box, CAAT box, and TA-rich elements. Some of these putative elements showed a unique occurrence pattern among genes responsive to nematode infection. The evolution of Hsp20 family in soybean genome has most likely involved a total of 23 gene duplications. The obtained expression profiles revealed that the majority of the 51 GmHsp20 candidates are induced under HT, but other members of this family could also be involved in normal cellular functions, unrelated to HT. Some of the GmHsp20 genes might be specialized to respond to nematode stress, and the predicted promoter structure of these genes seems to have a particular conserved pattern related to their biological function.
650 $aSoybeans
650 $aSoja
700 1 $aCARVALHO, M. C. C. G. de
700 1 $aLUANA M. DARBEN
700 1 $aKUWAHARA, M. K.
700 1 $aNEPOMUCENO, A. L.
700 1 $aDIAS, W. P.
700 1 $aABDELNOOR, R. V.
700 1 $aMARCELINO-GUIMARÃES, F. C.
773 $tBMC Genomics$gv. 14, article 577, 2013.
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Registro original: |
Embrapa Soja (CNPSO) |
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Registro Completo
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Biblioteca(s): |
Embrapa Trigo. |
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Data corrente: |
04/08/2020 |
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Data da última atualização: |
05/08/2020 |
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Tipo da produção científica: |
Circular Técnica |
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Autoria: |
SANTANA, F. M.; LAU, D.; SBALCHEIRO, C. C.; SCHIPANSKI, C. A.; VENANNCIO, W. S.; DALLAGNOL, L. J.; GUTERRES, C. W.; KUHNEM JÚNIOR, P. R.; CHAGAS, D. F. |
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Afiliação: |
FLAVIO MARTINS SANTANA, CNPT; DOUGLAS LAU, CNPT; CHEILA CRISTINA SBALCHEIRO, CNPT; Carlos André Schipanski, Engenheiro-agrônomo, M.Sc. em Fitossanidade, gerente técnico e de pesquisa na G12 Agro Pesquisa e Consultoria Agronômica, Guarapuava, PR; Wilson Story Venancio, Engenheiro-agrônomo, Dr. em Agronomia, diretor técnico da Estação Experimental Agrícola Campos Gerais (EEACG), Ponta Grossa, PR; Leandro Jose Dallagnol, Engenheiroagrônomo, Dr. em Fitopatologia, professor pesquisador na Universidade Federal de Pelotas, Pelotas, RS; Caroline Wesp Guterres, Bióloga, Dra. em Fitotecnia, pesquisadora da CCGL Tecnologia, Cruz Alta, RS; Paulo Roberto Kuhnem Junior, Engenheiro-agrônomo, Dr. em Fitotecnia/Fitopatologia, pesquisador na Biotrigo Genética Ltda., Passo Fundo, RS; Débora Fonseca Chagas, Engenheira-agrônoma, pesquisadora na G12 Agro Pesquisa e Consultoria Agronômica, Guarapuava, PR. |
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Título: |
Eficiência de fungicidas para controle de giberela do trigo: resultados dos Ensaios Cooperativos - Safra 2018. |
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Ano de publicação: |
2020 |
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Fonte/Imprenta: |
Passo Fundo, RS: Embrapa Trigo, 2020. |
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Série: |
(Embrapa Trigo. Circular Técnica online, 52). |
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ISSN: |
1518-6490 |
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Idioma: |
Português |
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Conteúdo: |
A giberela causada pelo fungo Gibberella zeae (Schw) Petch. (anamorfo Fusarium graminearum Schwabe), é uma das doenças fúngicas mais destrutivas da cultura do trigo e de ocorrência generalizada no mundo. A giberela é considerada uma doença de difícil controle e altamente influenciada pelo ambiente. A infecção por giberela causa danos significativos na produção de trigo em regiões de clima úmido e quente, principalmente no estádio de floração, favoráveis ao desenvolvimento da doença (Casa et al., 2007; Reunião..., 2018). Além disso, a contaminação por micotoxinas implica na desvalorização e na rejeição dos grãos no mercado moageiro (Fernandes e Tibola, 2011). |
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Palavras-Chave: |
Anamorfo Fusarium graminearum Schwabe; Gibberella zeae; Micotoxinas. |
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Thesagro: |
Contaminação; Doença de Planta; Doença Fúngica; Fungo; Giberela; Produção; Trigo. |
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Categoria do assunto: |
F Plantas e Produtos de Origem Vegetal |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/215108/1/CirTec52-Flavio.pdf
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Marc: |
LEADER 01722nam a2200349 a 4500
001 2124186
005 2020-08-05
008 2020 bl uuuu u0uu1 u #d
022 $a1518-6490
100 1 $aSANTANA, F. M.
245 $aEficiência de fungicidas para controle de giberela do trigo$bresultados dos Ensaios Cooperativos - Safra 2018.$h[electronic resource]
260 $aPasso Fundo, RS: Embrapa Trigo$c2020
490 $a(Embrapa Trigo. Circular Técnica online, 52).
520 $aA giberela causada pelo fungo Gibberella zeae (Schw) Petch. (anamorfo Fusarium graminearum Schwabe), é uma das doenças fúngicas mais destrutivas da cultura do trigo e de ocorrência generalizada no mundo. A giberela é considerada uma doença de difícil controle e altamente influenciada pelo ambiente. A infecção por giberela causa danos significativos na produção de trigo em regiões de clima úmido e quente, principalmente no estádio de floração, favoráveis ao desenvolvimento da doença (Casa et al., 2007; Reunião..., 2018). Além disso, a contaminação por micotoxinas implica na desvalorização e na rejeição dos grãos no mercado moageiro (Fernandes e Tibola, 2011).
650 $aContaminação
650 $aDoença de Planta
650 $aDoença Fúngica
650 $aFungo
650 $aGiberela
650 $aProdução
650 $aTrigo
653 $aAnamorfo Fusarium graminearum Schwabe
653 $aGibberella zeae
653 $aMicotoxinas
700 1 $aLAU, D.
700 1 $aSBALCHEIRO, C. C.
700 1 $aSCHIPANSKI, C. A.
700 1 $aVENANNCIO, W. S.
700 1 $aDALLAGNOL, L. J.
700 1 $aGUTERRES, C. W.
700 1 $aKUHNEM JÚNIOR, P. R.
700 1 $aCHAGAS, D. F.
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Embrapa Trigo (CNPT) |
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