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Registro Completo |
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Biblioteca(s): |
Embrapa Recursos Genéticos e Biotecnologia. |
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Data corrente: |
22/10/2025 |
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Data da última atualização: |
22/10/2025 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
HUG, L. A.; HATZENPICHLER, R.; MORARU, C.; SOARES, A, R.; MEYER, F.; HEYDER, A.; ABDALLAH, R. A.; ABDALRAHEM, A.; ABDULKADIR, N.; ADESIYAN, I. M.; ALTEIO, L.; ANANTHARAMAN, K.; ANDERSON, R.; ANDREI, A-S.; BAEZA, J. A.; BAK, F.; BAKER, B.; BARTHOLOMÄUS, A.; BEJERMAN, N.; BIDDLE, J.; BISSETT, A.; BLAKELEY-RUIZ, J. A.; BLOCK, K.; BOLDT, J.; BONILLA-ROSSO, G.; BORNEMANN, T. L.; BRAUER, V. S.; BRAZELTON, W.; BREMGES, A.; BUELOW, E.; BURCHAM, Z. M.; CANSDALE, A.; CAPORASO, J. G.; CERNAVA, T.; CHATZIGIANNIDOU, I.; COSTA, R.; CURRIE, C. R.; DAEBELER, A.; DE ANDA, V.; DE SANTIAGO, A.; TACCA, L. M. A. de; DEBELIUS, J.; DITTAMI, S. M.; DONG, X.; DŽUNKOVÁ, M.; EDWARDS, A.; EDWARDS, R.; EGBERT, S.; ENGELMANN, J. C.; ESSER, S. P.; ETTEMA, T. J. G.; ETTINGER, C. L.; FABIJAN, A. P.; FERGUSON, R. M. W.; FERRETTI, P.; FOUCAULT, P.; FUHRMAN, J. A.; GADA, A. M.; GEESINK, P.; GERHARDT, I. R.; GESSNER, M. O.; GIOVANNELLI, D.; GITTINS, D.; GLOOR, G. B.; GONZÁLEZ-PECH, R. A.; GOPALAKRISHNAPPA, C.; GREENING, C.; GREGOR, R.; GREGORY, A. C.; GROSSART, H.-P.; GROUSSIN, M.; GUERRERO, B. V.; GUZEL, M.; HAMAMURA, N.; HAMILTON, T. L.; HAMM, J. N.; HART, L.; HASSENRÜCK, C.; HAY, M.; HECHLER, R. M.; HELLWIG, P.; HENSON, M.; HEROLD, M.; HESKETH-BEST, P. J.; HESS, M.; HILLARY, L.; HITCH, T. C.; HIVARKAR, S. S.; HOFF, K. J.; HOM, E. F.; HOU, S.; HUGERTH, L. W.; HWANG, Y.; ILOTT, N.; JAY, Z. J.; JUNGBLUTH, S. P.; KARIMI, E.; KASPAREIT, Y. M.; KEATING, C.; KELLOM, M.; KILEDAL, E. A.; KLARENBERG, I.; KNIGHT, R.; KOECH, A. K.; KOONIN, E. V.; KORMAS, K.; KUJALA, K.; KYRPIDES, N. C.; LA ROSA, S. L.; LACZNY, C. C.; LAHMERS, K.; LAN, X.; LATEEF, A. A.; LAU, S. H.; LEESE, F.; LEZCANO, M. A.; LI, S. S.; LIMA, R. N.; LÜCKER, S.; MAHNERT, A.; MAJIDIAN, S.; MALFERTHEINER, L.; MARSHALL, A.; MEADEN, S.; MEEHAN, C. J.; MEIER, D. V.; MELKONIAN, C.; MENDE, D. R.; MEYER, J. L.; MICHOUD, G.; MIKRYUKOV, V.; MIRAVET-VERDE, S.; MUSCHIOL, J.; NATA’ALA, M. K.; NEUFELD, J. D.; NEUHAUSER, S.; OSUOLALE, O.; OSVATIC, J.; PAPPAS, K. M.; PARKS, D. H.; PARRY, R. H.; PASCOAL, P. V.; PAVLOUDI, C.; PEYTON, B.; PLEWKA, J.; POYET, M.; PRIEST, T.; QUAYE, E. K.; RAMGANESH, S.; RATTEI, T.; RAUSCH, P.; RECH FILHO, E. L.; RINKE, C.; ROBINSON, C.; RODRÍGUEZ-GIJÓN, A.; RODRIGUEZ-R, L. M.; ROHWER, R. R.; ROLOFF, T.; ROTHMAN, J. A.; RÜCKERT, S.; RUFF, S. E.; SAINI, J. S.; SANTIAGO-MARTÍNEZ, M. G.; SANTOFERRARA, L.; SARHAN, M. S.; SAW, J. H.; SBAFFI, T.; SCHÄFER, R. B.; SCHAIBLE, G.; SCHLOTER, M.; SCHMITZ, R. A.; SCHUBERT, C.; SCHWENGERS, O.; SEHNAL, L.; SEKAR, A.; SEKAR, J.; SEYOUM, M. M.; SHAH, M. B.; SHARON, I.; SIEBERS, B.; SIERADZKI, E. T.; SKLIROS, D.; SNOEYENBOS-WEST, O. L.; SORBIE, A.; SPETH, D. R.; SPREHN, C. G.; SRIVASTAVA, P.; STACH, T. L.; STAJICH, J. E.; STARKE, J.; STEEN, A. D.; STÖCKL, R.; STOIKIDOU, T.; STOPNISEK, N.; SUKUMARAN, R.; SURES, B.; SUZUKI, S.; TAMARIT, D.; THIERINGER, P.; TITO, R. Y.; TRIVEDI, C. B.; TRUBL, G.; TRUU, J.; TSIKNIA, M.; UGALDE, J.; VALENTIN-ALVARADO, L. E.; VÁZQUEZ-CAMPOS, X.; VIERHEILIG, J.; MEIJENFELDT, F. A. B. von; WAGNER, M.; WALSH, C. J.; WANG, S.; WANG, Y.; WEGNER, C.-E.; WEIR, T.; WEISS, L. C.; WEISSMAN, J. L.; WICHELS, A.; WILLIAMS, C. L.; WILLIAMS, T. A.; WORDEN, A. Z.; WOYKE, T.; WU, M.; XIU, W.; ZHANG, Y.; ZHU, J.; ZIELS, R. M.; ZWIRZITZ, B.; PROBST, A. J. |
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Afiliação: |
LAURA A. HUG, UNIVERSITY OF WATERLOO; ROLAND HATZENPICHLER, MONTANA STATE UNIVERSITY; CRISTINA MORARU, UNIVERSITY OF DUISBURG-ESSEN; ANDRÉ R. SOARES, UNIVERSITY ALLIANCE RUHR; FOLKER MEYER, UNIVERSITY OF DUISBURG-ESSEN; ANKE HEYDER, RUHR UNIVERSITY BOCHUM; ELIBIO LEOPOLDO RECH FILHO, CENARGEN; ALEXANDER J. PROBST, UNIVERSITY OF DUISBURG-ESSEN. |
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Título: |
A roadmap for equitable reuse of public microbiome data. |
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Ano de publicação: |
2025 |
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Fonte/Imprenta: |
Nature Microbiology, v. 10, p. 2384–2395, 2025. |
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DOI: |
https://doi.org/10.1038/s41564-025-02116-2 |
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Idioma: |
Inglês |
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Notas: |
Na publicação: E. Rech. |
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Conteúdo: |
Science benefits from rapid open data sharing, but current guidelines for data reuse were established two decades ago, when databases were several million times smaller than they are today. These guidelines are largely unfamiliar to the scientific community, and, owing to the rapid increase in biological data generated in the past decade, they are also outdated. As a result, there is a lack of community standards suited to the current landscape and inconsistent implementation of data sharing policies across institutions. Here we discuss current sequence data sharing policies and their benefits and drawbacks, and present a roadmap to establish guidelines for equitable sequence data reuse, developed in consultation with a data consortium of 167 microbiome scientists. We propose the use of a Data Reuse Information (DRI) tag for public sequence data, which will be associated with at least one Open Researcher and Contributor ID (ORCID) account. The machine-readable DRI tag indicates that the data creators prefer to be contacted before data reuse, and simultaneously provides data consumers with a mechanism to get in touch with the data creators. The DRI aims to facilitate and foster collaborations, and serve as a guideline that can be expanded to other data types. |
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Palavras-Chave: |
Current sequence data; Data Reuse Information (DRI). |
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Categoria do assunto: |
-- |
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Marc: |
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024 7 $ahttps://doi.org/10.1038/s41564-025-02116-2$2DOI
100 1 $aHUG, L. A.
245 $aA roadmap for equitable reuse of public microbiome data.$h[electronic resource]
260 $c2025
500 $aNa publicação: E. Rech.
520 $aScience benefits from rapid open data sharing, but current guidelines for data reuse were established two decades ago, when databases were several million times smaller than they are today. These guidelines are largely unfamiliar to the scientific community, and, owing to the rapid increase in biological data generated in the past decade, they are also outdated. As a result, there is a lack of community standards suited to the current landscape and inconsistent implementation of data sharing policies across institutions. Here we discuss current sequence data sharing policies and their benefits and drawbacks, and present a roadmap to establish guidelines for equitable sequence data reuse, developed in consultation with a data consortium of 167 microbiome scientists. We propose the use of a Data Reuse Information (DRI) tag for public sequence data, which will be associated with at least one Open Researcher and Contributor ID (ORCID) account. The machine-readable DRI tag indicates that the data creators prefer to be contacted before data reuse, and simultaneously provides data consumers with a mechanism to get in touch with the data creators. The DRI aims to facilitate and foster collaborations, and serve as a guideline that can be expanded to other data types.
653 $aCurrent sequence data
653 $aData Reuse Information (DRI)
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700 1 $aANANTHARAMAN, K.
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700 1 $aANDREI, A-S.
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700 1 $aEDWARDS, R.
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700 1 $aENGELMANN, J. C.
700 1 $aESSER, S. P.
700 1 $aETTEMA, T. J. G.
700 1 $aETTINGER, C. L.
700 1 $aFABIJAN, A. P.
700 1 $aFERGUSON, R. M. W.
700 1 $aFERRETTI, P.
700 1 $aFOUCAULT, P.
700 1 $aFUHRMAN, J. A.
700 1 $aGADA, A. M.
700 1 $aGEESINK, P.
700 1 $aGERHARDT, I. R.
700 1 $aGESSNER, M. O.
700 1 $aGIOVANNELLI, D.
700 1 $aGITTINS, D.
700 1 $aGLOOR, G. B.
700 1 $aGONZÁLEZ-PECH, R. A.
700 1 $aGOPALAKRISHNAPPA, C.
700 1 $aGREENING, C.
700 1 $aGREGOR, R.
700 1 $aGREGORY, A. C.
700 1 $aGROSSART, H.-P.
700 1 $aGROUSSIN, M.
700 1 $aGUERRERO, B. V.
700 1 $aGUZEL, M.
700 1 $aHAMAMURA, N.
700 1 $aHAMILTON, T. L.
700 1 $aHAMM, J. N.
700 1 $aHART, L.
700 1 $aHASSENRÜCK, C.
700 1 $aHAY, M.
700 1 $aHECHLER, R. M.
700 1 $aHELLWIG, P.
700 1 $aHENSON, M.
700 1 $aHEROLD, M.
700 1 $aHESKETH-BEST, P. J.
700 1 $aHESS, M.
700 1 $aHILLARY, L.
700 1 $aHITCH, T. C.
700 1 $aHIVARKAR, S. S.
700 1 $aHOFF, K. J.
700 1 $aHOM, E. F.
700 1 $aHOU, S.
700 1 $aHUGERTH, L. W.
700 1 $aHWANG, Y.
700 1 $aILOTT, N.
700 1 $aJAY, Z. J.
700 1 $aJUNGBLUTH, S. P.
700 1 $aKARIMI, E.
700 1 $aKASPAREIT, Y. M.
700 1 $aKEATING, C.
700 1 $aKELLOM, M.
700 1 $aKILEDAL, E. A.
700 1 $aKLARENBERG, I.
700 1 $aKNIGHT, R.
700 1 $aKOECH, A. K.
700 1 $aKOONIN, E. V.
700 1 $aKORMAS, K.
700 1 $aKUJALA, K.
700 1 $aKYRPIDES, N. C.
700 1 $aLA ROSA, S. L.
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700 1 $aLATEEF, A. A.
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700 1 $aMEEHAN, C. J.
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700 1 $aMENDE, D. R.
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700 1 $aMICHOUD, G.
700 1 $aMIKRYUKOV, V.
700 1 $aMIRAVET-VERDE, S.
700 1 $aMUSCHIOL, J.
700 1 $aNATA’ALA, M. K.
700 1 $aNEUFELD, J. D.
700 1 $aNEUHAUSER, S.
700 1 $aOSUOLALE, O.
700 1 $aOSVATIC, J.
700 1 $aPAPPAS, K. M.
700 1 $aPARKS, D. H.
700 1 $aPARRY, R. H.
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700 1 $aQUAYE, E. K.
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700 1 $aSPETH, D. R.
700 1 $aSPREHN, C. G.
700 1 $aSRIVASTAVA, P.
700 1 $aSTACH, T. L.
700 1 $aSTAJICH, J. E.
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700 1 $aSTEEN, A. D.
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700 1 $aMEIJENFELDT, F. A. B. von
700 1 $aWAGNER, M.
700 1 $aWALSH, C. J.
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700 1 $aWEIR, T.
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700 1 $aWEISSMAN, J. L.
700 1 $aWICHELS, A.
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700 1 $aWILLIAMS, T. A.
700 1 $aWORDEN, A. Z.
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700 1 $aXIU, W.
700 1 $aZHANG, Y.
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700 1 $aZWIRZITZ, B.
700 1 $aPROBST, A. J.
773 $tNature Microbiology$gv. 10, p. 2384–2395, 2025.
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Registro original: |
Embrapa Recursos Genéticos e Biotecnologia (CENARGEN) |
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