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Registro Completo |
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Biblioteca(s): |
Embrapa Milho e Sorgo. |
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Data corrente: |
24/07/2018 |
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Data da última atualização: |
05/02/2019 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
HUFNAGEL, B.; GUIMARÃES, C. T.; CRAFT, E. J.; SHAFF, J. E.; SCHAFFERT, R. E.; KOCHIAN, L. V.; MAGALHAES, J. V. |
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Afiliação: |
Universidade Federal de Minas Gerais; CLAUDIA TEIXEIRA GUIMARAES, CNPMS; Robert W. Holley Center of Agriculture & Health, Ithaca; Robert W. Holley Center of Agriculture & Health, Ithaca; ROBERT EUGENE SCHAFFERT, CNPMS; Global Institute for Food Security, University of Saskatchewan, Saskatoon.; JURANDIR VIEIRA DE MAGALHAES, CNPMS. |
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Título: |
Exploiting sorghum genetic diversity for enhanced aluminum tolerance: allele mining based on the AltSB locus. |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
Scientific Reports, v. 8, p. 1-13, July 2018. |
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DOI: |
10.1038/s41598-018-27817-z |
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Idioma: |
Inglês |
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Notas: |
Article number: 10094. |
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Conteúdo: |
Root damage due to aluminum (Al) toxicity restricts crop production on acidic soils, which are extensive in the tropics. The sorghum root Al-activated citrate transporter, SbMATE, underlies the Al tolerance locus, AltSB, and increases grain yield under Al toxicity. Here, AltSB loci associated with Al tolerance were converted into Amplification Refractory Mutation System (ARMS) markers, which are cost effective and easy to use. A DNA pooling strategy allowed us to identify accessions harboring rare favorable AltSB alleles in three germplasm sets while greatly reducing genotyping needs. Population structure analysis revealed that favorable AltSB alleles are predominantly found in subpopulations enriched with guinea sorghums, supporting a possible Western African origin of AltSB. The efficiency of allele mining in recovering Al tolerance accessions was the highest in the largest and highly diverse germplasm set, with a 10-fold reduction in the number of accessions that would need to be phenotyped in the absence of marker information. Finally, Al tolerant accessions were found to rely on SbMATE to exclude Al3+ from sensitive sites in the root apex. This study emphasizes gene-specific markers as important tools for efficiently mining useful rare alleles in diverse germplasm, bridging genetic resource conservation efforts and pre-breeding for Al tolerance. |
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Palavras-Chave: |
Tolerância; Toxicidade. |
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Thesagro: |
Alumínio; Germoplasma; Marcador Genético; Sorgo. |
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Categoria do assunto: |
G Melhoramento Genético |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/180151/1/Exploiting-sorghum.pdf
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Marc: |
LEADER 02214naa a2200289 a 4500
001 2093494
005 2019-02-05
008 2018 bl uuuu u00u1 u #d
024 7 $a10.1038/s41598-018-27817-z$2DOI
100 1 $aHUFNAGEL, B.
245 $aExploiting sorghum genetic diversity for enhanced aluminum tolerance$ballele mining based on the AltSB locus.$h[electronic resource]
260 $c2018
500 $aArticle number: 10094.
520 $aRoot damage due to aluminum (Al) toxicity restricts crop production on acidic soils, which are extensive in the tropics. The sorghum root Al-activated citrate transporter, SbMATE, underlies the Al tolerance locus, AltSB, and increases grain yield under Al toxicity. Here, AltSB loci associated with Al tolerance were converted into Amplification Refractory Mutation System (ARMS) markers, which are cost effective and easy to use. A DNA pooling strategy allowed us to identify accessions harboring rare favorable AltSB alleles in three germplasm sets while greatly reducing genotyping needs. Population structure analysis revealed that favorable AltSB alleles are predominantly found in subpopulations enriched with guinea sorghums, supporting a possible Western African origin of AltSB. The efficiency of allele mining in recovering Al tolerance accessions was the highest in the largest and highly diverse germplasm set, with a 10-fold reduction in the number of accessions that would need to be phenotyped in the absence of marker information. Finally, Al tolerant accessions were found to rely on SbMATE to exclude Al3+ from sensitive sites in the root apex. This study emphasizes gene-specific markers as important tools for efficiently mining useful rare alleles in diverse germplasm, bridging genetic resource conservation efforts and pre-breeding for Al tolerance.
650 $aAlumínio
650 $aGermoplasma
650 $aMarcador Genético
650 $aSorgo
653 $aTolerância
653 $aToxicidade
700 1 $aGUIMARÃES, C. T.
700 1 $aCRAFT, E. J.
700 1 $aSHAFF, J. E.
700 1 $aSCHAFFERT, R. E.
700 1 $aKOCHIAN, L. V.
700 1 $aMAGALHAES, J. V.
773 $tScientific Reports$gv. 8, p. 1-13, July 2018.
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Registro original: |
Embrapa Milho e Sorgo (CNPMS) |
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| Registros recuperados : 12 | |
| 1. |  | SOUSSANA, J.-F.; BARIONI, L. G.; ARI, T. B.; CONANT, R.; GERBER, P.; HAVLIK, P.; ICKOWICZ, A.; HOWDEN, M. Managing grassland systems in a changing climate: the search for practical solutions. In: INTERNATIONAL GRASSLAND CONGRESS, 22., 2013, Sydney. Revitalising grasslands to sustain our communities: proceedings. Orange New South Wales: New South Wales Department of Primary Industries, 2013. p. 10-27.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital. |
|    |
| 2. | | RUMPEL, C.; AMIRASLANI, F.; CHENU, C.; GARCIA CARDENAS, M.; KAONGA, M.; KOUTIKA, L-S.; LADHA, J.; MADARI, B.; SHIRATO, Y.; SMITH, P.; SOUDI, B.; SOUSSANA, J-F.; WHITEHEAD, D.; WOLLENBERG, E. The 4p1000 initiative: opportunities, limitations and challenges for implementing soil organic carbon sequestration as a sustainable development strategy. Ambio, v. 49, n. 1, p. 350-360, Jan. 2020.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 3. | | CHENU, C.; AMIRASLANI, F.; GARCIA CARDENAS, M.; KAONGA, M.; KOUTIKA, L-S.; LADHA, J.; MADARI, B. E.; RUMPEL, C.; SHIRATO, Y.; SMITH, P.; SOUDI, B.; SOUSSANA, J-F; WHITEHEAD, D.; WOLLENBERG, L. The 4 per 1000 initiative. In: WORLD CONGRESS OF SOIL SCIENCE, 21., 2018, Rio de Janeiro. Soil science: beyond food and fuel: proceedings. Rio de Janeiro: SBCS, 2018.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Arroz e Feijão. |
|  |
| 4. | | RUMPEL, C.; AMIRASLANI, F.; CHENU, C.; GARCIA CARDENAS, M.; KAONGA, M.; KOUTIKA, L-S; LADHA, J.; MADARI, B. E.; SHIRATO, Y.; SMITH, P.; SOUDI, B.; SOUSSANA, J-F.; WHITEHEAD, D.; WOLLENBERG, L. The 4 per mille initiative is promoting the implementation of sustainable development goals through science-policy-practice interactions. In: TERRAenVISION18, 2018, Barcelona. Conference: proceedings. Barcelona: University of Barcelona, 2018.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 5. | | RUMPEL, C.; AMIRASLANI, F.; BOSSIO, D.; CHENU, C.; HENRY, B.; FUENTES ESPINOZA, A.; KOUTIKA, L.-S.; LADHA, J.; MADARI, B.; MINASNY, B.; OLALEYE, A. O.; SHIRATO, Y.; SALL, S. N.; SOUSSANA, J.-F.; VARELA-ORTEGA, C. The role of soil carbon sequestration in enhancing human resilience in tackling global crises including pandemics. Soil Security, v. 8, 100069, Sept. 2022.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 5 |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 6. | | STAHL, C.; FONTAINE, S.; KLUMPP, K.; PICON-COCHARD, C.; GRISE, M. M.; DEZÉCACHE, C.; PONCHANT, l.; FREYCON, V.; BLANC, L.; BONAL, D.; BURBAN, B.; SOUSSANA, J.-F.; BLANFORT, V. Continuous soil carbon storage of old permanent pastures in Amazonia. Global Change Biology, v. 23, n. 8, p. 3382-3392, Aug. 2017.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 7. | | FONTAINE, S.; STAHL, C.; KLUMPP, K.; PICON-COCHARD, C.; GRISE, M. M.; DEZÉCACHE, C.; PONCHANT, L.; FREYCON, V.; BLANC, L.; BONAL, D.; BURBAN, B.; SOUSSANA, J.-F.; BLANFORT, V.; ALVAREZ, G. Response to Editor to the comment by Schipper & Smith to our paper entitled "Continuous soil carbon storage of old permanent pastures in Amazonia". Global Change Biology, v. 24, n. 3, p. e732-e733, Mar. 2018.| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 8. | | CEZIMBRA, I. M.; NUNES, P. A. de A.; SOUZA FILHO, W. de; TISCHLER, M. R.; GENRO, T. C. M.; BAYER, C.; SAVIAN, J. V.; BONNET, O. J. F.; SOUSSANA, J.-F.; CARVALHO, P. C. de F. Potential of grazing management to improve beef cattle production and mitigate methane emissions in native grasslands of the Pampa biome. Science of the Total Environment, v. 780, 146582, Aug. 2021.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pecuária Sul. |
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| 9. | | RUMPEL, C.; AMIRASLANI, F.; BOSSIO, D.; CHENU, C.; GARCIA CARDENAS, M.; HENRY, B.; FUENTES ESPINOZA, A.; KOUTIKA, L.-S.; LADHA, J.; MADARI, B. E.; MINASNY, B.; OLALEYE, A.; SALL, S. N.; SHIRATO, Y.; SOUSSANA, J.-F.; VARELA-ORTEGA, C. Studies from global regions indicate promising avenues for maintaining and increasing soil organic carbon stocks. Regional Environmental Change, v. 23, 2023.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 10. | | FRANZLUEBBERS, A. J.; ANGERS, D.; CLARK, H.; EHRHARDT, F.; GRACE, P.; MARTIN NETO, L.; MCCONKEY, B.; PALMER, L.; RECOUS, S.; RODRIGUES, R. de A. R.; ROEL, A.; SCHOLTEN, M.; SHAFER, S.; SLATTERY, B.; SOUSSANA, J.-F.; VERHAGEN, J.; YAGI, K.; ZORRILLA, G. Global Research Alliance on agricultural greenhouse gases. In: ZOLIN, C. A.; RODRIGUES, R. de A. R. (Ed.). Impact of climate change on water resources in agriculture. Boca Raton: CRC Press, 2015. cap. 3, p. 39-60.| Tipo: Capítulo em Livro Técnico-Científico |
| Biblioteca(s): Embrapa Solos. |
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| 11. | | SOUSSANA, J-F.; ARIAS-NAVARRO, C.; BISPO, A.; CHENU, C.; SMITH, P.; KUHNERT, M.; FRELIH-LARSEN, A.; HERB, I.; KUIKMAN, P.; KEESSTRA, S.; VERHAGEN, J.; CLAESSENS, L.; MADARI, B. E.; DEMENOIS, J.; ALBRECHT, A.; VERCHOT, L.; MONTANARELLA, L.; HIEDERER, R.; GRUNDY, M.; BALDOCK, J.; CHOTTE, J-L.; KIM, J. Strategic research agenda on soil carbon in agricultural soils. Wageningen: CIRCASA, 2020. European Union's Horizon 2020 research and innovation programme grant agreement No 774378. Coordination of International Research Cooperation on soil Carbon Sequestration in Agriculture.| Tipo: Nota Técnica/Nota Científica |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 12. | | BRAY, A. W.; KIM, J. H.; SCHRUMPF, M.; PEACOCK, C.; BANWART, S.; SCHIPPER, L.; ANGERS, D.; CHIRINDA, N.; ZINN, Y. L.; ALBRECHT, A.; KUIKMAN, P.; JOUQUET, P.; DEMENOIS, J.; FARRELL, M.; SOUSSANA, J.-F.; KUHNERT, M.; MILNE, E.; FONTAINE, S.; TAGHIZADEH-TOOSI, A.; CERRI, C. E. P.; CORBEELS, M.; CARDINAEL, R.; CERVANTES, V. A.; OLESEN, J. E.; BATJES, N.; HEUVELINK, G.; MAIA, S. M. F.; KEESSTRA, S.; CLAESSEN, L.; MADARI, B. E.; VERCHOT, L.; NIE, W.; BRUNELLE, T.; MORAN, D.; FRANK, S.; BODLE, R.; FRELIH-LARSEN, A.; DOUGILL, A.; MONTANARELLA, L.; STRINGER, L.; CHENU, C.; HIEDERER, R.; SMITH, P.; ARIAS-NAVARRO, C. The science base of a strategic research agenda: executive summary. Wageningen: CIRCASA, 2019. 15 p. European Union's Horizon 2020 Research and Innovation Programme Grant Agreement No 774378. Coordination of International Research Cooperation on Soil Carbon Sequestration in Agriculture.| Tipo: Nota Técnica/Nota Científica |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| Registros recuperados : 12 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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